Guide to the Human Genome
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Name: ANKRD52 Sequence: fasta or formatted (1076aa) NCBI GI: 157743284
Description:

ankyrin repeat domain 52

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.4        144           4
 C cysteine            3.0         32           2
 D aspartate           5.8         62           1
 E glutamate           5.1         55           2
 F phenylalanine       2.3         25           2
 G glycine             7.3         79           2
 H histidine           4.8         52           2
 I isoleucine          2.9         31           1
 K lysine              3.6         39           2
 L leucine            14.0        151           3
 M methionine          1.6         17           1
 N asparagine          4.8         52           2
 P proline             3.9         42           2
 Q glutamine           2.5         27           1
 R arginine            4.7         51           3
 S serine              6.4         69           2
 T threonine           5.6         60           2
 V valine              5.6         60           2
 W tryptophan          0.5          5           1
 Y tyrosine            2.1         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 52 
ANKRD28               0.575   ankyrin repeat domain 28 
ANKRD44               0.524   ankyrin repeat domain 44 
ANK2                  0.126   ankyrin 2 isoform 3 
ANK2                  0.126   ankyrin 2 isoform 2 
ANK2                  0.126   ankyrin 2 isoform 1 
ANK1                  0.126   ankyrin 1 isoform 9 
ANK1                  0.126   ankyrin 1 isoform 1 
ANK1                  0.126   ankyrin 1 isoform 3 
ANK1                  0.126   ankyrin 1 isoform 2 
ANK1                  0.126   ankyrin 1 isoform 4 
ANK3                  0.125   ankyrin 3 isoform 1 
ANKRD17               0.108   ankyrin repeat domain protein 17 isoform b 
ANKRD50               0.098   ankyrin repeat domain 50 
TNKS                  0.096   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS2                 0.094   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
INVS                  0.083   inversin isoform a 
INVS                  0.083   inversin isoform b 
ANKK1                 0.076   ankyrin repeat and kinase domain containing 1 
ANKRD17               0.070   ankyrin repeat domain protein 17 isoform a 
ANKHD1                0.068   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.068   ANKHD1-EIF4EBP3 protein 
RIPK4                 0.066   ankyrin repeat domain 3 
TRPA1                 0.066   ankyrin-like protein 1 
ANKFY1                0.064   ankyrin repeat and FYVE domain containing 1 isoform...
LOC441869             0.061   hypothetical protein LOC441869 
ANKDD1A               0.061   ankyrin repeat and death domain containing 1A 
ANKHD1                0.057   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.057   ankyrin repeat and KH domain containing 1 isoform 2 ...
DAPK1                 0.054   death-associated protein kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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