Guide to the Human Genome
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Name: TNKS Sequence: fasta or formatted (1327aa) NCBI GI: 87239981
Description:

tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase

Referenced in:

Ankyrin Family
polyADP-Ribose Polymerase Family
Telomere Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5        153           3
 C cysteine            2.3         31           2
 D aspartate           5.0         66           2
 E glutamate           5.6         74           3
 F phenylalanine       2.0         26           1
 G glycine             8.3        110           3
 H histidine           5.1         68           6
 I isoleucine          3.4         45           2
 K lysine              5.0         67           2
 L leucine            10.8        143           3
 M methionine          1.6         21           1
 N asparagine          4.7         62           2
 P proline             6.1         81           8
 Q glutamine           3.6         48           3
 R arginine            4.4         59           2
 S serine              7.2         95           6
 T threonine           5.0         67           2
 V valine              5.7         75           2
 W tryptophan          0.3          4           1
 Y tyrosine            2.4         32           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tankyrase, TRF1-interacting ankyrin-related ADP-ribo... 
TNKS2                 0.726   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANK3                  0.110   ankyrin 3 isoform 1 
ANK2                  0.109   ankyrin 2 isoform 2 
ANK2                  0.109   ankyrin 2 isoform 1 
ANK2                  0.108   ankyrin 2 isoform 3 
ANK1                  0.107   ankyrin 1 isoform 9 
ANK1                  0.107   ankyrin 1 isoform 1 
ANK1                  0.107   ankyrin 1 isoform 3 
ANK1                  0.107   ankyrin 1 isoform 2 
ANK1                  0.107   ankyrin 1 isoform 4 
ANKRD28               0.083   ankyrin repeat domain 28 
ANKRD44               0.080   ankyrin repeat domain 44 
ANKRD52               0.076   ankyrin repeat domain 52 
ANKRD17               0.067   ankyrin repeat domain protein 17 isoform b 
ANKRD50               0.067   ankyrin repeat domain 50 
ANKRD17               0.053   ankyrin repeat domain protein 17 isoform a 
ANKHD1                0.053   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.053   ANKHD1-EIF4EBP3 protein 
ANKK1                 0.051   ankyrin repeat and kinase domain containing 1 
INVS                  0.045   inversin isoform a 
INVS                  0.045   inversin isoform b 
ANKHD1                0.044   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.044   ankyrin repeat and KH domain containing 1 isoform 2 ...
TRPA1                 0.042   ankyrin-like protein 1 
ANKFY1                0.041   ankyrin repeat and FYVE domain containing 1 isoform...
RIPK4                 0.041   ankyrin repeat domain 3 
LOC441869             0.040   hypothetical protein LOC441869 
DAPK1                 0.037   death-associated protein kinase 1 
KIDINS220             0.036   kinase D-interacting substrate of 220 kDa 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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