Guide to the Human Genome
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Name: ANK1 Sequence: fasta or formatted (109aa) NCBI GI: 70780361
Description:

ankyrin 1 isoform 7

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [156aa] ankyrin 1 isoform 10
alt prot [1897aa] ankyrin 1 isoform 9
alt prot [1856aa] ankyrin 1 isoform 4
alt prot [1719aa] ankyrin 1 isoform 2
alt prot [1880aa] ankyrin 1 isoform 3
alt prot [1881aa] ankyrin 1 isoform 1
alt prot [155aa] ankyrin 1 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             0.0          0           0
 C cysteine            1.8          2           1
 D aspartate           4.6          5           2
 E glutamate          10.1         11           2
 F phenylalanine       6.4          7           2
 G glycine             5.5          6           1
 H histidine           3.7          4           1
 I isoleucine          4.6          5           1
 K lysine              4.6          5           2
 L leucine            11.0         12           2
 M methionine          1.8          2           1
 N asparagine          4.6          5           1
 P proline             2.8          3           1
 Q glutamine           6.4          7           1
 R arginine            4.6          5           3
 S serine              6.4          7           1
 T threonine           9.2         10           1
 V valine             11.0         12           2
 W tryptophan          0.9          1           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin 1 isoform 7 
ANK1                  0.908   ankyrin 1 isoform 5 
ANK1                  0.908   ankyrin 1 isoform 10 
ANK1                  0.224   ankyrin 1 isoform 9 
ANK1                  0.224   ankyrin 1 isoform 4 
ANK1                  0.199   ankyrin 1 isoform 1 
ANK1                  0.199   ankyrin 1 isoform 3 
ANK1                  0.199   ankyrin 1 isoform 2 
ANK2                  0.071   ankyrin 2 isoform 3 
ANK2                  0.071   ankyrin 2 isoform 2 
ANK2                  0.071   ankyrin 2 isoform 1 
SMCR8                 0.015   Smith-Magenis syndrome chromosome region, candidate...
CLEC12B               0.015   C-type lectin domain family 12, member B isoform 1 ...
CLEC12B               0.015   C-type lectin domain family 12, member B isoform 2 ...
SEL1L                 0.015   sel-1 suppressor of lin-12-like 
RHPN1                 0.015   rhophilin 1 
LOC100291610          0.010   PREDICTED: similar to KIAA1920 protein 
TCHH                  0.010   trichohyalin 
SF3A3                 0.005   splicing factor 3a, subunit 3 
HEATR7B2              0.005   HEAT repeat family member 7B2 
PBRM1                 0.005   polybromo 1 isoform 1 
PBRM1                 0.005   polybromo 1 isoform 2 
PBRM1                 0.005   polybromo 1 isoform 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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