Guide to the Human Genome
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Name: ANK1 Sequence: fasta or formatted (1719aa) NCBI GI: 70780355
Description:

ankyrin 1 isoform 2

Referenced in:

Ankyrin Family

Other entries for this name:
alt prot [156aa] ankyrin 1 isoform 10
alt prot [1897aa] ankyrin 1 isoform 9
alt prot [1856aa] ankyrin 1 isoform 4
alt prot [1880aa] ankyrin 1 isoform 3
alt prot [1881aa] ankyrin 1 isoform 1
alt prot [109aa] ankyrin 1 isoform 7
alt prot [155aa] ankyrin 1 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7        149           2
 C cysteine            1.1         19           1
 D aspartate           4.9         85           2
 E glutamate           7.3        125           3
 F phenylalanine       2.4         41           1
 G glycine             6.5        111           2
 H histidine           4.1         70           2
 I isoleucine          4.1         71           2
 K lysine              4.9         84           2
 L leucine            10.6        183           3
 M methionine          1.9         33           1
 N asparagine          4.9         85           2
 P proline             5.4         92           3
 Q glutamine           4.8         82           2
 R arginine            5.5         95           3
 S serine              6.5        111           2
 T threonine           6.3        108           3
 V valine              7.9        135           2
 W tryptophan          0.6         10           1
 Y tyrosine            1.7         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin 1 isoform 2 
ANK1                  0.879   ankyrin 1 isoform 1 
ANK1                  0.879   ankyrin 1 isoform 3 
ANK1                  0.879   ankyrin 1 isoform 4 
ANK1                  0.871   ankyrin 1 isoform 9 
ANK2                  0.512   ankyrin 2 isoform 2 
ANK2                  0.509   ankyrin 2 isoform 3 
ANK3                  0.507   ankyrin 3 isoform 1 
ANK2                  0.488   ankyrin 2 isoform 1 
ANK3                  0.211   ankyrin 3 isoform 2 
ANKRD28               0.091   ankyrin repeat domain 28 
ANKRD44               0.089   ankyrin repeat domain 44 
ANKRD50               0.086   ankyrin repeat domain 50 
ANKRD17               0.083   ankyrin repeat domain protein 17 isoform b 
ANKRD52               0.080   ankyrin repeat domain 52 
TNKS2                 0.080   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.079   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKK1                 0.062   ankyrin repeat and kinase domain containing 1 
ANKRD17               0.060   ankyrin repeat domain protein 17 isoform a 
ANKHD1                0.058   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.058   ANKHD1-EIF4EBP3 protein 
INVS                  0.051   inversin isoform a 
INVS                  0.051   inversin isoform b 
ANKFY1                0.051   ankyrin repeat and FYVE domain containing 1 isoform...
KIDINS220             0.050   kinase D-interacting substrate of 220 kDa 
RIPK4                 0.049   ankyrin repeat domain 3 
TRPA1                 0.048   ankyrin-like protein 1 
ANKHD1                0.046   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.046   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANK1                  0.043   ankyrin 1 isoform 10 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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