Guide to the Human Genome
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Name: ANKRD28 Sequence: fasta or formatted (1053aa) NCBI GI: 68131557
Description:

ankyrin repeat domain 28

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0        126           4
 C cysteine            2.8         30           2
 D aspartate           6.4         67           2
 E glutamate           4.7         49           2
 F phenylalanine       2.2         23           1
 G glycine             7.0         74           2
 H histidine           4.6         48           2
 I isoleucine          3.9         41           2
 K lysine              4.5         47           2
 L leucine            12.4        131           3
 M methionine          1.9         20           2
 N asparagine          6.6         69           2
 P proline             3.3         35           1
 Q glutamine           2.8         29           1
 R arginine            3.5         37           2
 S serine              6.8         72           4
 T threonine           5.8         61           1
 V valine              6.1         64           3
 W tryptophan          0.5          5           1
 Y tyrosine            2.4         25           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat domain 28 
ANKRD44               0.596   ankyrin repeat domain 44 
ANKRD52               0.587   ankyrin repeat domain 52 
ANK3                  0.147   ankyrin 3 isoform 1 
ANK2                  0.145   ankyrin 2 isoform 3 
ANK2                  0.145   ankyrin 2 isoform 2 
ANK2                  0.145   ankyrin 2 isoform 1 
ANK1                  0.145   ankyrin 1 isoform 9 
ANK1                  0.145   ankyrin 1 isoform 1 
ANK1                  0.145   ankyrin 1 isoform 3 
ANK1                  0.145   ankyrin 1 isoform 2 
ANK1                  0.145   ankyrin 1 isoform 4 
ANKRD50               0.124   ankyrin repeat domain 50 
ANKRD17               0.118   ankyrin repeat domain protein 17 isoform b 
TNKS                  0.106   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS2                 0.104   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
INVS                  0.082   inversin isoform a 
INVS                  0.082   inversin isoform b 
ANKK1                 0.081   ankyrin repeat and kinase domain containing 1 
TRPA1                 0.075   ankyrin-like protein 1 
RIPK4                 0.075   ankyrin repeat domain 3 
ANKHD1                0.069   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.069   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.068   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.068   ANKHD1-EIF4EBP3 protein 
KIDINS220             0.067   kinase D-interacting substrate of 220 kDa 
ANKDD1A               0.067   ankyrin repeat and death domain containing 1A 
TNNI3K                0.067   TNNI3 interacting kinase isoform b 
TNNI3K                0.067   TNNI3 interacting kinase isoform a 
ANKRD17               0.067   ankyrin repeat domain protein 17 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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