Guide to the Human Genome
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Name: ANKK1 Sequence: fasta or formatted (765aa) NCBI GI: 30425444
Description:

ankyrin repeat and kinase domain containing 1

Referenced in:

Ankyrin Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         79           3
 C cysteine            1.8         14           1
 D aspartate           5.1         39           2
 E glutamate           5.8         44           2
 F phenylalanine       2.5         19           1
 G glycine             6.3         48           2
 H histidine           4.1         31           2
 I isoleucine          4.2         32           3
 K lysine              5.0         38           2
 L leucine            13.5        103           3
 M methionine          2.7         21           3
 N asparagine          3.3         25           2
 P proline             5.4         41           2
 Q glutamine           5.1         39           2
 R arginine            5.1         39           2
 S serine              6.5         50           2
 T threonine           3.5         27           1
 V valine              6.1         47           2
 W tryptophan          1.7         13           1
 Y tyrosine            2.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ankyrin repeat and kinase domain containing 1 
RIPK4                 0.270   ankyrin repeat domain 3 
ANK3                  0.143   ankyrin 3 isoform 1 
ANK1                  0.139   ankyrin 1 isoform 9 
ANK1                  0.139   ankyrin 1 isoform 1 
ANK1                  0.139   ankyrin 1 isoform 3 
ANK1                  0.139   ankyrin 1 isoform 2 
ANK1                  0.139   ankyrin 1 isoform 4 
ANK2                  0.137   ankyrin 2 isoform 3 
ANK2                  0.137   ankyrin 2 isoform 2 
ANK2                  0.137   ankyrin 2 isoform 1 
DAPK1                 0.112   death-associated protein kinase 1 
ANKRD28               0.112   ankyrin repeat domain 28 
RIPK2                 0.108   receptor-interacting serine-threonine kinase 2 
ANKRD52               0.107   ankyrin repeat domain 52 
ANKRD44               0.106   ankyrin repeat domain 44 
ANKRD50               0.100   ankyrin repeat domain 50 
TNKS2                 0.093   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
TNKS                  0.090   tankyrase, TRF1-interacting ankyrin-related ADP-ribo...
ANKRD17               0.089   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.089   ankyrin repeat domain protein 17 isoform b 
ANKHD1                0.088   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.088   ANKHD1-EIF4EBP3 protein 
ANKHD1                0.085   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.085   ankyrin repeat and KH domain containing 1 isoform 2 ...
INVS                  0.085   inversin isoform a 
INVS                  0.085   inversin isoform b 
KIDINS220             0.083   kinase D-interacting substrate of 220 kDa 
ANKDD1A               0.083   ankyrin repeat and death domain containing 1A 
LOC441869             0.079   hypothetical protein LOC441869 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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