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Search of human proteins with 13899241
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13899241 ionized calcium binding adapter molecule 2 isoform
1 [Homo sapiens]
(150 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13899241 ionized calcium binding adapter molecule 2 isoform 1... 299 7e-82
gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo sapi... 194 2e-50
gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo sapi... 127 4e-30
gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens] 85 2e-17
gi|20149675 EF-hand domain family, member D2 [Homo sapiens] 59 2e-09
gi|20149496 EF-hand domain family, member D1 [Homo sapiens] 56 1e-08
gi|4757974 centrin 1 [Homo sapiens] 46 1e-05
gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens] 43 9e-05
gi|4757902 caltractin [Homo sapiens] 42 1e-04
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens] 42 3e-04
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens] 42 3e-04
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 41 3e-04
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens] 41 3e-04
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 41 3e-04
gi|11067753 calcium binding protein 5 [Homo sapiens] 41 3e-04
gi|50897266 calmodulin-like 6 [Homo sapiens] 39 0.001
gi|58218968 calmodulin 3 [Homo sapiens] 37 0.005
gi|4502549 calmodulin 2 [Homo sapiens] 37 0.005
gi|133908616 glycerol-3-phosphate dehydrogenase 2, mitochondrial... 37 0.005
gi|133908614 glycerol-3-phosphate dehydrogenase 2, mitochondrial... 37 0.005
gi|5901912 calmodulin 1 [Homo sapiens] 37 0.005
gi|223278387 calmodulin-like 5 [Homo sapiens] 36 0.011
gi|113425119 PREDICTED: similar to golgi autoantigen, golgin sub... 36 0.011
gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-l... 36 0.014
gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-l... 36 0.014
gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-l... 36 0.014
gi|21624641 calcium binding protein 4 [Homo sapiens] 35 0.018
gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.031
gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.031
gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.031
>gi|13899241 ionized calcium binding adapter molecule 2 isoform 1
[Homo sapiens]
Length = 150
Score = 299 bits (765), Expect = 7e-82
Identities = 150/150 (100%), Positives = 150/150 (100%)
Query: 1 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFD 60
MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFD
Sbjct: 1 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFD 60
Query: 61 LNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVL 120
LNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVL
Sbjct: 61 LNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVL 120
Query: 121 KLVMMFEGKANESSPKPVGPPPERDIASLP 150
KLVMMFEGKANESSPKPVGPPPERDIASLP
Sbjct: 121 KLVMMFEGKANESSPKPVGPPPERDIASLP 150
>gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo
sapiens]
Length = 147
Score = 194 bits (494), Expect = 2e-50
Identities = 94/141 (66%), Positives = 115/141 (81%), Gaps = 1/141 (0%)
Query: 10 QGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDL 69
QGGKAFGLLKA+QE RL EIN++FL D KYS +E+LP KL FKEKYMEFDLN G+ID+
Sbjct: 8 QGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDI 67
Query: 70 MSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFEGK 129
MSLKRM+EKLGVPKTHLE+KK+I EV+ G +T SY DF+ MMLGKRSA+LK+++M+E K
Sbjct: 68 MSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEK 127
Query: 130 ANESSPKPVGPPPERDIASLP 150
A E KP GPP ++ I+ LP
Sbjct: 128 AREKE-KPTGPPAKKAISELP 147
>gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo
sapiens]
Length = 93
Score = 127 bits (319), Expect = 4e-30
Identities = 60/94 (63%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Query: 57 MEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKR 116
MEFDLN G+ID+MSLKRM+EKLGVPKTHLE+KK+I EV+ G +T SY DF+ MMLGKR
Sbjct: 1 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 60
Query: 117 SAVLKLVMMFEGKANESSPKPVGPPPERDIASLP 150
SA+LK+++M+E KA E KP GPP ++ I+ LP
Sbjct: 61 SAILKMILMYEEKAREKE-KPTGPPAKKAISELP 93
>gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens]
Length = 132
Score = 85.1 bits (209), Expect = 2e-17
Identities = 39/55 (70%), Positives = 48/55 (87%)
Query: 68 DLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKL 122
D+MSLKRM+EKLGVPKTHLE+KK+I EV+ G +T SY DF+ MMLGKRSA+LK+
Sbjct: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 132
>gi|20149675 EF-hand domain family, member D2 [Homo sapiens]
Length = 240
Score = 58.5 bits (140), Expect = 2e-09
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
+++ ++ + ++D +G IDLM LK MMEKLG P+THL +K MI EV +S+R
Sbjct: 92 KQIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFR 151
Query: 107 DFV 109
+F+
Sbjct: 152 EFL 154
>gi|20149496 EF-hand domain family, member D1 [Homo sapiens]
Length = 239
Score = 55.8 bits (133), Expect = 1e-08
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 59 FDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFV 109
+D +G IDLM LK MMEKLG P+THL +K MI EV +S+R+F+
Sbjct: 102 YDAGRDGFIDLMELKLMMEKLGAPQTHLGLKSMIKEVDEDFDGKLSFREFL 152
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 46.2 bits (108), Expect = 1e-05
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 53 KEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
+E + FD++ G ID LK M LG EMKKMISEV + IS+ DF+ +M
Sbjct: 34 REAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVDREGTGKISFNDFLAVM 93
Query: 113 LGKRS------AVLKLVMMFE 127
K S +LK +F+
Sbjct: 94 TQKMSEKDTKEEILKAFRLFD 114
Score = 38.5 bits (88), Expect = 0.002
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 15/105 (14%)
Query: 19 KARQERRLAEINRE---------FLC--DQKYSDEENLPEKLTAFKEKYMEFDLNNEGEI 67
K ++ ++E++RE FL QK S+++ E L AF+ FD + G+I
Sbjct: 66 KEEMKKMISEVDREGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRL----FDDDETGKI 121
Query: 68 DLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
+LKR+ +LG T E+++MI E ++ +F+ +M
Sbjct: 122 SFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIM 166
>gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]
Length = 227
Score = 43.1 bits (100), Expect = 9e-05
Identities = 19/82 (23%), Positives = 40/82 (48%)
Query: 31 REFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKK 90
R+ + + D PE++ +E + EFD + +G I+ L M +G T +E+ +
Sbjct: 66 RKGFAENRQPDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIE 125
Query: 91 MISEVTGGVSDTISYRDFVNMM 112
+ ++ + + + DFV +M
Sbjct: 126 LSQQINMNLGGHVDFDDFVELM 147
Score = 37.7 bits (86), Expect = 0.004
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 53 KEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
++ + EFD N +GEI L+ M K LG H +++++I +V + + +FV M
Sbjct: 165 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 224
Query: 112 M 112
M
Sbjct: 225 M 225
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 42.4 bits (98), Expect = 1e-04
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYR 106
E+ +E + FD + G ID+ LK M LG E+KKMISE+ + +++
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 107 DFVNMMLGKRS------AVLKLVMMFE 127
DF+ +M K S +LK +F+
Sbjct: 88 DFLTVMTQKMSEKDTKEEILKAFKLFD 114
Score = 40.0 bits (92), Expect = 7e-04
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 37 QKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVT 96
QK S+++ E L AFK FD + G+I +LKR+ ++LG T E+++MI E
Sbjct: 95 QKMSEKDTKEEILKAFKL----FDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEAD 150
Query: 97 GGVSDTISYRDFVNMM 112
+S ++F+ +M
Sbjct: 151 RDGDGEVSEQEFLRIM 166
>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
Length = 163
Score = 41.6 bits (96), Expect = 3e-04
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 41 DEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVS 100
D E PE++ + + EFD + +G I L M LG T +E+ ++ +++GG
Sbjct: 15 DRELRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQISGG-- 72
Query: 101 DTISYRDFVNMM 112
+ + DFV +M
Sbjct: 73 -KVDFEDFVELM 83
>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
Length = 220
Score = 41.6 bits (96), Expect = 3e-04
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 41 DEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVS 100
D E PE++ + + EFD + +G I L M LG T +E+ ++ +++GG
Sbjct: 72 DRELRPEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQISGG-- 129
Query: 101 DTISYRDFVNMM 112
+ + DFV +M
Sbjct: 130 -KVDFEDFVELM 140
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 41.2 bits (95), Expect = 3e-04
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 41 DEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVS 100
D PE++ +E + EFD + +G I+ L M +G T +E+ ++ ++ +
Sbjct: 219 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLG 278
Query: 101 DTISYRDFVNMM 112
+ + DFV +M
Sbjct: 279 GHVDFDDFVELM 290
Score = 37.7 bits (86), Expect = 0.004
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 53 KEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
++ + EFD N +GEI L+ M K LG H +++++I +V + + +FV M
Sbjct: 308 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 367
Query: 112 M 112
M
Sbjct: 368 M 368
>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
Length = 167
Score = 41.2 bits (95), Expect = 3e-04
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 41 DEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVS 100
D PE++ +E + EFD + +G I+ L M +G T +E+ ++ ++ +
Sbjct: 16 DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLG 75
Query: 101 DTISYRDFVNMM 112
+ + DFV +M
Sbjct: 76 GHVDFDDFVELM 87
Score = 37.7 bits (86), Expect = 0.004
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 53 KEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
++ + EFD N +GEI L+ M K LG H +++++I +V + + +FV M
Sbjct: 105 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 164
Query: 112 M 112
M
Sbjct: 165 M 165
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 41.2 bits (95), Expect = 3e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 34 LCDQKYSDEENLPEKLTA-FKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMI 92
+ DQ+ L E++ A FK + FD + G+I + L +M LG T E+ +I
Sbjct: 1 MTDQQAEARSYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAII 60
Query: 93 SEVTGGVSDTISYRDFVNMML 113
EV S TI + +F+ MM+
Sbjct: 61 EEVDEDGSGTIDFEEFLVMMV 81
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 41.2 bits (95), Expect = 3e-04
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 53 KEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDTISYRDFVNM 111
++ + EFD N +GEI L+ L++ M++ LG T E+ +++ E T+ + +FV M
Sbjct: 111 RDAFKEFDTNGDGEITLVELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEEFVKM 170
Query: 112 M 112
M
Sbjct: 171 M 171
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 39.3 bits (90), Expect = 0.001
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 43 ENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDT 102
E + + + + FD +G ID +LK ++ G P +E ++M+ E T
Sbjct: 103 EKAQNQESELRAAFRVFDKEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRT 162
Query: 103 ISYRDFVNMMLGK 115
I Y +FV MM G+
Sbjct: 163 IDYEEFVAMMTGE 175
Score = 28.5 bits (62), Expect = 2.2
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 47 EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEV 95
E++ +K + FD GE+ L+ +M LG+ T E+ M +V
Sbjct: 33 EQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDV 81
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 37.4 bits (85), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 53 KEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
+E + FD + G I L+ +M LG T E+ +MI E ++Y +FV MM
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Query: 113 LGK 115
K
Sbjct: 147 TAK 149
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 37.4 bits (85), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 53 KEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
+E + FD + G I L+ +M LG T E+ +MI E ++Y +FV MM
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Query: 113 LGK 115
K
Sbjct: 147 TAK 149
>gi|133908616 glycerol-3-phosphate dehydrogenase 2, mitochondrial
[Homo sapiens]
Length = 727
Score = 37.4 bits (85), Expect = 0.005
Identities = 22/109 (20%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 45 LPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTIS 104
LP + +K+++ +FD + +G I ++ ++R++E + V + ++++EV + +
Sbjct: 621 LPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVE 680
Query: 105 YRDFVNMM----LGKRSAVLKLVMMFEGKANESSPKPVGPPPERDIASL 149
+F+ +M G+ S ++M + N P+ P +R L
Sbjct: 681 LNEFLQLMSAIQKGRVSGSRLAILMKTAEENLDRRVPI--PVDRSCGGL 727
>gi|133908614 glycerol-3-phosphate dehydrogenase 2, mitochondrial
[Homo sapiens]
Length = 727
Score = 37.4 bits (85), Expect = 0.005
Identities = 22/109 (20%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 45 LPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTIS 104
LP + +K+++ +FD + +G I ++ ++R++E + V + ++++EV + +
Sbjct: 621 LPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVE 680
Query: 105 YRDFVNMM----LGKRSAVLKLVMMFEGKANESSPKPVGPPPERDIASL 149
+F+ +M G+ S ++M + N P+ P +R L
Sbjct: 681 LNEFLQLMSAIQKGRVSGSRLAILMKTAEENLDRRVPI--PVDRSCGGL 727
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 37.4 bits (85), Expect = 0.005
Identities = 20/63 (31%), Positives = 30/63 (47%)
Query: 53 KEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
+E + FD + G I L+ +M LG T E+ +MI E ++Y +FV MM
Sbjct: 87 REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146
Query: 113 LGK 115
K
Sbjct: 147 TAK 149
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 36.2 bits (82), Expect = 0.011
Identities = 20/84 (23%), Positives = 40/84 (47%)
Query: 43 ENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDT 102
E PE+ +K+ + D + G I+ L ++ G + +++K+ISEV
Sbjct: 4 ELTPEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGE 63
Query: 103 ISYRDFVNMMLGKRSAVLKLVMMF 126
IS+++F+ R+ + L + F
Sbjct: 64 ISFQEFLTAAKKARAGLEDLQVAF 87
Score = 34.7 bits (78), Expect = 0.031
Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 24 RRLAEINREFLCDQKYSD---EENLPEKLTAFKEK----------YMEFDLNNEGEIDLM 70
+ L+E L + SD E + E LTA K+ + FD + +G I +
Sbjct: 42 KNLSEAQLRKLISEVDSDGDGEISFQEFLTAAKKARAGLEDLQVAFRAFDQDGDGHITVD 101
Query: 71 SLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
L+R M LG P E+ MI E ++Y +F M+
Sbjct: 102 ELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 143
>gi|113425119 PREDICTED: similar to golgi autoantigen, golgin
subfamily a, 8E isoform 2 [Homo sapiens]
Length = 631
Score = 36.2 bits (82), Expect = 0.011
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 1 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEF- 59
++GEL ++ + + LL RQE R+ E ++ E++ EKL + F
Sbjct: 317 VAGELQSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQH--EKLRQLAKPQSVFE 374
Query: 60 DLNNEGEIDL---MSLKRMMEKLGVPKTHLEM 88
+LNNE + L +K + EKLG + HLE+
Sbjct: 375 ELNNENKSTLQLEQQVKELQEKLG--EEHLEV 404
>gi|113425145 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 35.8 bits (81), Expect = 0.014
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 1 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEF- 59
++GEL ++ + + LL RQE R+ E ++ E++ EKL + F
Sbjct: 318 VAGELQSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQH--EKLRQLAKPQSVFE 375
Query: 60 DLNNEGEIDL---MSLKRMMEKLGVPKTHLE 87
+LNNE + L +K + EKLG + HLE
Sbjct: 376 ELNNENKSTLQLEQQVKELQEKLG--EEHLE 404
>gi|113425137 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 632
Score = 35.8 bits (81), Expect = 0.014
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 1 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEF- 59
++GEL ++ + + LL RQE R+ E ++ E++ EKL + F
Sbjct: 318 VAGELQSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQH--EKLRQLAKPQSVFE 375
Query: 60 DLNNEGEIDL---MSLKRMMEKLGVPKTHLE 87
+LNNE + L +K + EKLG + HLE
Sbjct: 376 ELNNENKSTLQLEQQVKELQEKLG--EEHLE 404
>gi|113425121 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 4 [Homo sapiens]
Length = 632
Score = 35.8 bits (81), Expect = 0.014
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 1 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEF- 59
++GEL ++ + + LL RQE R+ E ++ E++ EKL + F
Sbjct: 318 VAGELQSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQH--EKLRQLAKPQSVFE 375
Query: 60 DLNNEGEIDL---MSLKRMMEKLGVPKTHLE 87
+LNNE + L +K + EKLG + HLE
Sbjct: 376 ELNNENKSTLQLEQQVKELQEKLG--EEHLE 404
>gi|21624641 calcium binding protein 4 [Homo sapiens]
Length = 275
Score = 35.4 bits (80), Expect = 0.018
Identities = 18/72 (25%), Positives = 34/72 (47%)
Query: 41 DEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVS 100
D E PE+L + + EFD + +G I L M LG T +E+ ++ + +
Sbjct: 123 DRELGPEELDELQAAFEEFDTDRDGYISHRELGDCMRTLGYMPTEMELLEVSQHIKMRMG 182
Query: 101 DTISYRDFVNMM 112
+ + +FV ++
Sbjct: 183 GRVDFEEFVELI 194
Score = 30.8 bits (68), Expect = 0.45
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 56 YMEFDLNNEGEIDLMSLKRMMEKL-GVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
+ EFD + +G I + L+ + L G P E+ +M+ EV T+ + +FV M+
Sbjct: 215 FREFDRDRDGRITVAELREAVPALLGEPLAGPELDEMLREVDLNGDGTVDFDEFVMML 272
>gi|169208042 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 34.7 bits (78), Expect = 0.031
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 1 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEF- 59
++GEL ++ + + LL RQE R+ E ++ E++ EKL + F
Sbjct: 310 VAGELQSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQH--EKLRQLAKPQSVFE 367
Query: 60 DLNNEGEIDL---MSLKRMMEKLGVPK 83
+LNNE + L +K + EKLG K
Sbjct: 368 ELNNENKSTLQLEQQVKELQEKLGEVK 394
>gi|169208038 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 2 [Homo sapiens]
Length = 595
Score = 34.7 bits (78), Expect = 0.031
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 1 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEF- 59
++GEL ++ + + LL RQE R+ E ++ E++ EKL + F
Sbjct: 310 VAGELQSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQH--EKLRQLAKPQSVFE 367
Query: 60 DLNNEGEIDL---MSLKRMMEKLGVPK 83
+LNNE + L +K + EKLG K
Sbjct: 368 ELNNENKSTLQLEQQVKELQEKLGEVK 394
>gi|169208018 PREDICTED: similar to Golgin subfamily A member 8-like
protein 2 isoform 3 [Homo sapiens]
Length = 595
Score = 34.7 bits (78), Expect = 0.031
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 1 MSGELSNRFQGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEF- 59
++GEL ++ + + LL RQE R+ E ++ E++ EKL + F
Sbjct: 310 VAGELQSQVKNNQHISLLNRRQEERIREQEERLRKQEERLQEQH--EKLRQLAKPQSVFE 367
Query: 60 DLNNEGEIDL---MSLKRMMEKLGVPK 83
+LNNE + L +K + EKLG K
Sbjct: 368 ELNNENKSTLQLEQQVKELQEKLGEVK 394
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,881,073
Number of Sequences: 37866
Number of extensions: 238944
Number of successful extensions: 804
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 738
Number of HSP's gapped (non-prelim): 104
length of query: 150
length of database: 18,247,518
effective HSP length: 93
effective length of query: 57
effective length of database: 14,725,980
effective search space: 839380860
effective search space used: 839380860
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.