Guide to the Human Genome
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Name: LOC727909 Sequence: fasta or formatted (632aa) NCBI GI: 113425121
Description:

PREDICTED: similar to Golgin subfamily A member 8-like protein 2 isoform 4

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [595aa] PREDICTED: similar to Golgin subfamily A member 8-like protein 2 ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         56           3
 C cysteine            1.6         10           2
 D aspartate           3.3         21           1
 E glutamate          13.3         84           3
 F phenylalanine       1.3          8           1
 G glycine             5.5         35           3
 H histidine           4.0         25           2
 I isoleucine          2.4         15           2
 K lysine              7.8         49           3
 L leucine            11.2         71           2
 M methionine          1.6         10           1
 N asparagine          3.8         24           2
 P proline             4.7         30           2
 Q glutamine           9.5         60           2
 R arginine            6.5         41           4
 S serine              6.3         40           2
 T threonine           3.2         20           1
 V valine              3.3         21           2
 W tryptophan          0.9          6           1
 Y tyrosine            0.9          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Golgin subfamily A member 8-l... 
LOC728080             0.994   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.991   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.977   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653720             0.921   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.901   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.899   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.891   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.854   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.850   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.850   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.836   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653073             0.811   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653061             0.805   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.784   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.764   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.764   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.758   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.721   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.720   PREDICTED: similar to hect domain and RLD 2 
LOC653061             0.711   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA8A               0.602   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.601   golgi autoantigen, golgin subfamily a, 8B 
LOC390561             0.558   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.536   PREDICTED: similar to hect domain and RLD 2 
GOLGA8E               0.523   golgi autoantigen, golgin subfamily a, 8E 
GOLGA8G               0.511   golgi autoantigen, golgin subfamily a, 8G 
LOC653061             0.506   PREDICTED: similar to Golgin subfamily A member 8-l...
GOLGA6                0.331   golgi autoantigen, golgin subfamily a, 6 
GOLGA6B               0.330   golgi autoantigen, golgin subfamily a, 6B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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