Guide to the Human Genome
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Name: LOC727909 Sequence: fasta or formatted (595aa) NCBI GI: 169208018
Description:

PREDICTED: similar to Golgin subfamily A member 8-like protein 2 isoform 3

Referenced in:

ER, Golgi, and the Secretory Pathway

Other entries for this name:
alt prot [632aa] PREDICTED: similar to Golgin subfamily A member 8-like protein 2 ...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.9         53           3
 C cysteine            1.8         11           2
 D aspartate           2.9         17           1
 E glutamate          12.9         77           3
 F phenylalanine       1.2          7           1
 G glycine             5.4         32           3
 H histidine           4.0         24           2
 I isoleucine          2.5         15           2
 K lysine              8.4         50           3
 L leucine            10.8         64           2
 M methionine          1.2          7           1
 N asparagine          3.7         22           2
 P proline             4.7         28           2
 Q glutamine           9.2         55           2
 R arginine            6.7         40           4
 S serine              6.9         41           3
 T threonine           3.2         19           1
 V valine              3.5         21           2
 W tryptophan          1.0          6           1
 Y tyrosine            1.0          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to Golgin subfamily A member 8-l... 
LOC728080             0.997   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.997   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.981   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653720             0.908   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.907   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728080             0.903   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.903   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.894   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.894   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.888   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC643699             0.888   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC653061             0.834   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653720             0.827   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.821   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728498             0.808   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.808   PREDICTED: Golgin subfamily A member 8-like protein...
LOC653125             0.802   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653061             0.780   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC653073             0.732   PREDICTED: Golgin subfamily A member 8-like protein...
GOLGA8A               0.688   golgi autoantigen, golgin subfamily a, 8A 
GOLGA8B               0.687   golgi autoantigen, golgin subfamily a, 8B 
LOC390561             0.646   PREDICTED: similar to hect domain and RLD 2 
LOC390561             0.636   PREDICTED: similar to hect domain and RLD 2 
LOC653061             0.631   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC390561             0.631   PREDICTED: similar to hect domain and RLD 2 
GOLGA8G               0.465   golgi autoantigen, golgin subfamily a, 8G 
GOLGA8E               0.459   golgi autoantigen, golgin subfamily a, 8E 
GOLGA6                0.354   golgi autoantigen, golgin subfamily a, 6 
GOLGA6C               0.354   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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