Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RSRC2 Sequence: fasta or formatted (375aa) NCBI GI: 38146113
Description:

arginine/serine-rich coiled-coil 2 isoform b

Referenced in:

Capping and Splicing

Other entries for this name:
alt prot [434aa] arginine/serine-rich coiled-coil 2 isoform a
alt prot [202aa] arginine/serine-rich coiled-coil 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         30           5
 C cysteine            0.3          1           1
 D aspartate           3.2         12           1
 E glutamate           9.1         34           2
 F phenylalanine       2.4          9           2
 G glycine             4.8         18           2
 H histidine           2.7         10           1
 I isoleucine          2.1          8           1
 K lysine             10.9         41           2
 L leucine             4.5         17           2
 M methionine          3.2         12           1
 N asparagine          3.2         12           1
 P proline             2.4          9           3
 Q glutamine           5.3         20           2
 R arginine           17.1         64           2
 S serine             13.1         49           2
 T threonine           3.5         13           1
 V valine              2.7         10           1
 W tryptophan          0.5          2           1
 Y tyrosine            1.1          4           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arginine/serine-rich coiled-coil 2 isoform b 
RSRC2                 0.976   arginine/serine-rich coiled-coil 2 isoform a 
RSRC2                 0.521   arginine/serine-rich coiled-coil 2 isoform c 
DDX46                 0.123   DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 
RBM25                 0.122   RNA binding motif protein 25 
LOC100131202          0.116   PREDICTED: hypothetical protein 
LOC100286959          0.115   PREDICTED: hypothetical protein XP_002343921 
CROP                  0.111   cisplatin resistance-associated overexpressed protei...
CROP                  0.111   cisplatin resistance-associated overexpressed protei...
SFRS12                0.109   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.109   splicing factor, arginine/serine-rich 12 isoform b [...
SFRS6                 0.106   arginine/serine-rich splicing factor 6 
PRPF38B               0.106   PRP38 pre-mRNA processing factor 38 (yeast) domain ...
LOC100131202          0.105   PREDICTED: hypothetical protein 
ZC3H13                0.104   zinc finger CCCH-type containing 13 
SFRS4                 0.102   splicing factor, arginine/serine-rich 4 
LUC7L2                0.101   LUC7-like 2 
SRRM2                 0.099   splicing coactivator subunit SRm300 
SFRS11                0.096   splicing factor, arginine/serine-rich 11 
SON                   0.096   SON DNA-binding protein isoform F 
SON                   0.096   SON DNA-binding protein isoform B 
RSRC1                 0.095   arginine/serine-rich coiled-coil 1 
PPIG                  0.095   peptidylprolyl isomerase G 
LOC100288837          0.095   PREDICTED: hypothetical protein XP_002343931, parti...
ZRANB2                0.095   zinc finger protein 265 isoform 1 
LOC100133599          0.094   PREDICTED: hypothetical protein 
ZRANB2                0.092   zinc finger protein 265 isoform 2 
LOC100170229          0.092   hypothetical protein LOC100170229 
LUC7L                 0.091   LUC7-like isoform b 
LOC100134067          0.089   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press