SNRNP27 23689

Name: SNRNP27	Sequence: fasta or formatted (155aa)		NCBI GI: 24307919
Description: small nuclear ribonucleoprotein 27kDa (U4/U6.U5)		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.6 4 1 C cysteine 0.0 0 0 D aspartate 3.9 6 1 E glutamate 11.6 18 3 F phenylalanine 2.6 4 1 G glycine 4.5 7 2 H histidine 1.3 2 1 I isoleucine 2.6 4 1 K lysine 9.0 14 2 L leucine 2.6 4 1 M methionine 3.2 5 2 N asparagine 2.6 4 1 P proline 3.9 6 1 Q glutamine 1.9 3 1 R arginine 25.2 39 4 S serine 14.2 22 1 T threonine 4.5 7 1 V valine 1.9 3 1 W tryptophan 0.0 0 0 Y tyrosine 1.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Ho... DDX46 0.192 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 PRPF38B 0.178 PRP38 pre-mRNA processing factor 38 (yeast) domain ... SRRM2 0.178 splicing coactivator subunit SRm300 SFRS11 0.174 splicing factor, arginine/serine-rich 11 SFRS12 0.174 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.174 splicing factor, arginine/serine-rich 12 isoform b [... RSRC2 0.167 arginine/serine-rich coiled-coil 2 isoform b RSRC2 0.167 arginine/serine-rich coiled-coil 2 isoform a SFRS4 0.160 splicing factor, arginine/serine-rich 4 LUC7L2 0.157 LUC7-like 2 LOC100286959 0.157 PREDICTED: hypothetical protein XP_002343921 LOC100131202 0.153 PREDICTED: hypothetical protein RBM16 0.149 RNA-binding motif protein 16 LOC100134067 0.149 PREDICTED: hypothetical protein RBM25 0.142 RNA binding motif protein 25 SFRS2 0.142 splicing factor, arginine/serine-rich 2 LOC100131202 0.142 PREDICTED: hypothetical protein LOC100170229 0.142 hypothetical protein LOC100170229 ARGLU1 0.142 arginine and glutamate rich 1 ZC3H13 0.139 zinc finger CCCH-type containing 13 CROP 0.139 cisplatin resistance-associated overexpressed protei... CROP 0.139 cisplatin resistance-associated overexpressed protei... LUC7L 0.135 LUC7-like isoform b PRPF38A 0.135 PRP38 pre-mRNA processing factor 38 (yeast) domain c... LOC100288837 0.132 PREDICTED: hypothetical protein XP_002343931, parti... SFRS6 0.132 arginine/serine-rich splicing factor 6 DDX23 0.132 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 DHX8 0.132 DEAH (Asp-Glu-Ala-His) box polypeptide 8 SFRS18 0.128 splicing factor, arginine/serine-rich 130 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.