Guide to the Human Genome
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Name: DHX57 Sequence: fasta or formatted (1386aa) NCBI GI: 39777586
Description:

DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57

Referenced in:

DEAD / H Helicase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         84           2
 C cysteine            2.0         28           2
 D aspartate           4.8         67           2
 E glutamate           7.9        110           3
 F phenylalanine       4.0         56           2
 G glycine             6.2         86          13
 H histidine           2.2         31           2
 I isoleucine          5.4         75           3
 K lysine              6.6         92           3
 L leucine             9.9        137           3
 M methionine          1.5         21           1
 N asparagine          3.8         52           2
 P proline             4.8         66           2
 Q glutamine           5.0         69           2
 R arginine            6.3         88           2
 S serine              9.1        126           3
 T threonine           4.0         55           2
 V valine              6.9         96           3
 W tryptophan          0.7         10           1
 Y tyrosine            2.7         37           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 
DHX36                 0.216   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...
DHX36                 0.210   DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...
DHX29                 0.202   DEAH (Asp-Glu-Ala-His) box polypeptide 29 
DHX9                  0.159   DEAH (Asp-Glu-Ala-His) box polypeptide 9 
TDRD9                 0.105   tudor domain containing 9 
YTHDC2                0.094   YTH domain containing 2 
DHX30                 0.085   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 2 ...
DHX30                 0.085   DEAH (Asp-Glu-Ala-His) box polypeptide 30 isoform 1 ...
DHX34                 0.079   DEAH (Asp-Glu-Ala-His) box polypeptide 34 
DHX37                 0.075   DEAH (Asp-Glu-Ala-His) box polypeptide 37 
DHX16                 0.063   DEAH (Asp-Glu-Ala-His) box polypeptide 16 
DHX8                  0.063   DEAH (Asp-Glu-Ala-His) box polypeptide 8 
DHX38                 0.059   DEAH (Asp-Glu-Ala-His) box polypeptide 38 
DHX15                 0.057   DEAH (Asp-Glu-Ala-His) box polypeptide 15 
DHX35                 0.057   DEAH (Asp-Glu-Ala-His) box polypeptide 35 
DHX33                 0.051   DEAH (Asp-Glu-Ala-His) box polypeptide 33 
DHX40                 0.047   DEAH (Asp-Glu-Ala-His) box polypeptide 40 
LOC100134387          0.041   PREDICTED: similar to DEAH (Asp-Glu-Ala-His) box po...
DHX32                 0.036   DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 [Hom...
DQX1                  0.023   DEAQ box polypeptide 1 (RNA-dependent ATPase) [Homo...
FAM98B                0.010   family with sequence similarity 98, member B isofor...
MAF                   0.010   v-maf musculoaponeurotic fibrosarcoma oncogene homol...
MAF                   0.010   v-maf musculoaponeurotic fibrosarcoma oncogene homolo...
CAPNS1                0.010   calpain, small subunit 1 
CAPNS1                0.010   calpain, small subunit 1 
KRT10                 0.009   keratin 10 
HNRNPA0               0.009   heterogeneous nuclear ribonucleoprotein A0 
FBL                   0.008   fibrillarin 
KRT1                  0.008   keratin 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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