CD74 212

Name: CD74	Sequence: fasta or formatted (232aa)		NCBI GI: 10835071
Description: CD74 antigen isoform b		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [160aa] CD74 antigen isoform c alt prot [296aa] CD74 antigen isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 11 1 C cysteine 0.9 2 1 D aspartate 4.7 11 2 E glutamate 5.6 13 1 F phenylalanine 2.2 5 1 G glycine 5.6 13 1 H histidine 3.0 7 2 I isoleucine 1.3 3 1 K lysine 6.5 15 1 L leucine 13.8 32 3 M methionine 6.5 15 1 N asparagine 3.9 9 2 P proline 9.5 22 2 Q glutamine 6.5 15 3 R arginine 6.0 14 3 S serine 6.5 15 2 T threonine 5.6 13 2 V valine 3.9 9 1 W tryptophan 1.3 3 1 Y tyrosine 2.2 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD74 antigen isoform b CD74 0.896 CD74 antigen isoform a CD74 0.603 CD74 antigen isoform c TRIM33 0.015 tripartite motif-containing 33 protein isoform beta ... TRIM33 0.015 tripartite motif-containing 33 protein isoform alpha... CPEB4 0.011 cytoplasmic polyadenylation element binding protein... PRR11 0.011 proline rich 11 LOC100129463 0.009 PREDICTED: hypothetical protein LOC100129463 0.009 PREDICTED: hypothetical protein LOC100129463 0.009 PREDICTED: hypothetical protein LOC100129463 0.009 PREDICTED: hypothetical protein SLC44A1 0.007 CDW92 antigen BAT2 0.007 HLA-B associated transcript-2 TGFB1I1 0.007 transforming growth factor beta 1 induced transcrip... TGFB1I1 0.007 transforming growth factor beta 1 induced transcript... FAM5B 0.007 family with sequence similarity 5, member B SF3B2 0.007 splicing factor 3B subunit 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.