CD74 34821

Name: CD74	Sequence: fasta or formatted (160aa)		NCBI GI: 68448537
Description: CD74 antigen isoform c		Referenced in: HLA and Related Proteins
Other entries for this name: alt prot [232aa] CD74 antigen isoform b alt prot [296aa] CD74 antigen isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 9 1 C cysteine 1.2 2 1 D aspartate 3.8 6 2 E glutamate 3.1 5 1 F phenylalanine 1.2 2 1 G glycine 6.2 10 1 H histidine 2.5 4 1 I isoleucine 1.2 2 1 K lysine 5.0 8 1 L leucine 14.4 23 3 M methionine 6.9 11 1 N asparagine 4.4 7 2 P proline 7.5 12 2 Q glutamine 8.1 13 3 R arginine 8.8 14 3 S serine 5.6 9 1 T threonine 6.2 10 2 V valine 3.8 6 1 W tryptophan 1.9 3 1 Y tyrosine 2.5 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 CD74 antigen isoform c CD74 0.895 CD74 antigen isoform a CD74 0.895 CD74 antigen isoform b PRR11 0.016 proline rich 11 LOC100129463 0.013 PREDICTED: hypothetical protein LOC100129463 0.013 PREDICTED: hypothetical protein LOC100129463 0.013 PREDICTED: hypothetical protein LOC100129463 0.013 PREDICTED: hypothetical protein POGK 0.010 pogo transposable element with KRAB domain SLC44A1 0.010 CDW92 antigen SETD1B 0.010 SET domain containing 1B KIAA0319L 0.010 dyslexia susceptibility 2-like SF3B2 0.010 splicing factor 3B subunit 2 PLEKHG6 0.007 pleckstrin homology domain-containing family G memb... PLEKHG6 0.007 pleckstrin homology domain-containing family G memb... PLEKHG6 0.007 pleckstrin homology domain-containing family G memb... RGAG1 0.007 retrotransposon gag domain containing 1 APOB 0.007 apolipoprotein B precursor TNKS1BP1 0.007 tankyrase 1-binding protein 1 SLCO6A1 0.007 solute carrier organic anion transporter family, mem... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.