PCDH12 36119

Name: PCDH12	Sequence: fasta or formatted (1184aa)		NCBI GI: 7706113
Description: protocadherin 12 precursor		Referenced in: Cadherins and Related Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 92 3 C cysteine 1.0 12 1 D aspartate 5.9 70 2 E glutamate 6.9 82 3 F phenylalanine 2.4 29 2 G glycine 6.6 78 2 H histidine 2.4 28 1 I isoleucine 3.7 44 1 K lysine 3.5 41 2 L leucine 12.8 152 3 M methionine 1.5 18 2 N asparagine 4.0 47 2 P proline 7.4 88 2 Q glutamine 5.4 64 2 R arginine 5.7 67 3 S serine 8.8 104 5 T threonine 5.7 67 2 V valine 6.4 76 2 W tryptophan 0.7 8 1 Y tyrosine 1.4 17 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin 12 precursor PCDH18 0.245 protocadherin 18 precursor PCDH19 0.199 protocadherin 19 isoform a PCDH19 0.199 protocadherin 19 isoform b PCDH17 0.193 protocadherin 17 precursor PCDH10 0.190 protocadherin 10 isoform 1 precursor PCDH10 0.190 protocadherin 10 isoform 2 precursor PCDHAC2 0.179 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHAC2 0.179 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDHGB7 0.170 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB7 0.170 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGA12 0.169 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA12 0.169 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA1 0.169 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA1 0.169 protocadherin gamma subfamily A, 1 isoform 2 precurs... PCDHGB4 0.168 protocadherin gamma subfamily B, 4 isoform 2 precurs... PCDHGB4 0.168 protocadherin gamma subfamily B, 4 isoform 1 precurs... PCDHGC4 0.168 protocadherin gamma subfamily C, 4 isoform 2 precurs... PCDHGC4 0.168 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHGA2 0.168 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA2 0.168 protocadherin gamma subfamily A, 2 isoform 2 precurs... PCDHGB2 0.167 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB2 0.167 protocadherin gamma subfamily B, 2 isoform 2 precurs... PCDHGA4 0.167 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA4 0.167 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA8 0.166 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA8 0.166 protocadherin gamma subfamily A, 8 isoform 2 precurso... PCDHGA5 0.166 protocadherin gamma subfamily A, 5 isoform 2 precurs... PCDHGA5 0.166 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGC3 0.165 protocadherin gamma subfamily C, 3 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.