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Search of human proteins with 67782346
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|67782346 lysyl oxidase-like 1 preproprotein [Homo sapiens]
(574 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|67782346 lysyl oxidase-like 1 preproprotein [Homo sapiens] 1219 0.0
gi|20149540 lysyl oxidase preproprotein [Homo sapiens] 357 1e-98
gi|14211943 lysyl oxidase-like 3 precursor [Homo sapiens] 222 8e-58
gi|4505011 lysyl oxidase-like 2 precursor [Homo sapiens] 216 5e-56
gi|67782349 lysyl oxidase-like 4 precursor [Homo sapiens] 214 1e-55
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 53 9e-07
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 52 1e-06
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 52 1e-06
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 52 1e-06
gi|210032580 SET domain containing 1B [Homo sapiens] 50 6e-06
gi|6912582 penta-EF-hand domain containing 1 [Homo sapiens] 49 1e-05
gi|150417989 cyclin K isoform 1 [Homo sapiens] 49 1e-05
gi|4758392 forkhead box D1 [Homo sapiens] 49 1e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 48 2e-05
gi|11386183 WAS protein family, member 2 [Homo sapiens] 48 3e-05
gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming... 48 3e-05
gi|7706501 WW domain binding protein 11 [Homo sapiens] 47 5e-05
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 47 6e-05
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 46 8e-05
gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo s... 46 8e-05
gi|59806357 submaxillary gland androgen regulated protein 3 homo... 46 8e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 46 8e-05
gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens] 46 8e-05
gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens] 46 8e-05
gi|146134388 YLP motif containing 1 [Homo sapiens] 46 8e-05
gi|11415052 retinoid X receptor, beta [Homo sapiens] 46 1e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 46 1e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 46 1e-04
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 46 1e-04
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 46 1e-04
>gi|67782346 lysyl oxidase-like 1 preproprotein [Homo sapiens]
Length = 574
Score = 1219 bits (3154), Expect = 0.0
Identities = 574/574 (100%), Positives = 574/574 (100%)
Query: 1 MALARGSRQLGALVWGACLCVLVHGQQAQPGQGSDPARWRQLIQWENNGQVYSLLNSGSE 60
MALARGSRQLGALVWGACLCVLVHGQQAQPGQGSDPARWRQLIQWENNGQVYSLLNSGSE
Sbjct: 1 MALARGSRQLGALVWGACLCVLVHGQQAQPGQGSDPARWRQLIQWENNGQVYSLLNSGSE 60
Query: 61 YVPAGPQRSESSSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTVRGQARHPFG 120
YVPAGPQRSESSSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTVRGQARHPFG
Sbjct: 61 YVPAGPQRSESSSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTVRGQARHPFG 120
Query: 121 FGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYP 180
FGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYP
Sbjct: 121 FGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYP 180
Query: 181 QAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPYQPRARYEEYGGG 240
QAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPYQPRARYEEYGGG
Sbjct: 181 QAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPYQPRARYEEYGGG 240
Query: 241 EELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQA 300
EELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQA
Sbjct: 241 EELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQA 300
Query: 301 HGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVY 360
HGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVY
Sbjct: 301 HGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVY 360
Query: 361 RPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLL 420
RPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLL
Sbjct: 361 RPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLL 420
Query: 421 RFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASF 480
RFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASF
Sbjct: 421 RFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASF 480
Query: 481 CLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPK 540
CLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPK
Sbjct: 481 CLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPK 540
Query: 541 YIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS 574
YIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS
Sbjct: 541 YIVLESDFTNNVVRCNIHYTGRYVSATNCKIVQS 574
>gi|20149540 lysyl oxidase preproprotein [Homo sapiens]
Length = 417
Score = 357 bits (917), Expect = 1e-98
Identities = 172/268 (64%), Positives = 202/268 (75%), Gaps = 6/268 (2%)
Query: 308 GWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGR 367
G P +N P + + PY P + SD P + ++ R G YRP
Sbjct: 149 GEVPALSNLRPPSRVDGMVGDDPYNPYKYSDDNPYYNYYDTYERPR--PGGRYRPGYGTG 206
Query: 368 ----GLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLLRFP 423
GLPDLV DP Y+QASTYVQ+ +Y+LRCAAEE CLASTAY + DYD RVLLRFP
Sbjct: 207 YFQYGLPDLVADPYYIQASTYVQKMSMYNLRCAAEENCLASTAYRADVRDYDHRVLLRFP 266
Query: 424 QRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASFCLE 483
QRVKNQGT+DFLP+RPR++WEWHSCHQHYHSMDEFSHYDLLDA T ++VAEGHKASFCLE
Sbjct: 267 QRVKNQGTSDFLPSRPRYSWEWHSCHQHYHSMDEFSHYDLLDANTQRRVAEGHKASFCLE 326
Query: 484 DSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPKYIV 543
D++CD+G +R+ACT+HTQGLSPGCYDTY ADIDCQWIDITDV+PGNYILKV VNP Y+V
Sbjct: 327 DTSCDYGYHRRFACTAHTQGLSPGCYDTYGADIDCQWIDITDVKPGNYILKVSVNPSYLV 386
Query: 544 LESDFTNNVVRCNIHYTGRYVSATNCKI 571
ESD+TNNVVRC+I YTG + A+ C I
Sbjct: 387 PESDYTNNVVRCDIRYTGHHAYASGCTI 414
Score = 61.6 bits (148), Expect = 2e-09
Identities = 62/205 (30%), Positives = 83/205 (40%), Gaps = 27/205 (13%)
Query: 19 LCVLVH------GQQAQPGQG-SDPARWRQLIQWENNGQVYSLLNSGSEYVPAGPQRSES 71
LC LVH GQQ P + + P WRQ IQWENNGQV+SLL+ GS+Y P +R +
Sbjct: 15 LCALVHCAPPAAGQQQPPREPPAAPGAWRQQIQWENNGQVFSLLSLGSQYQP--QRRRDP 72
Query: 72 SSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTV-----RGQARHPFGFGQVPD 126
+ V A AQQ R+ R + GS V R ARH F G
Sbjct: 73 GAAVPGAANASAQQPRTPILLIRDNRTAAARTRTAGSSGVTAGRPRPTARHWFQAGYSTS 132
Query: 127 NWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYPQAPFVS 186
RE G +RA + ++ S P P ++ P+ +
Sbjct: 133 RARE------AGASRAENQTAPGEVPALSNLRPPSRVDGMVGDDPYNPYKYS-DDNPYYN 185
Query: 187 QYENYD---PASR---TYDQGFVYY 205
Y+ Y+ P R Y G+ Y
Sbjct: 186 YYDTYERPRPGGRYRPGYGTGYFQY 210
>gi|14211943 lysyl oxidase-like 3 precursor [Homo sapiens]
Length = 753
Score = 222 bits (565), Expect = 8e-58
Identities = 109/202 (53%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 371 DLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQG 430
DL+ VQ + Y++ L+ L CAAEE CLAS+A + Y R LLRF ++ N G
Sbjct: 530 DLLLHSALVQETAYIEDRPLHMLYCAAEENCLASSARSAN-WPYGHRRLLRFSSQIHNLG 588
Query: 431 TADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASFCLEDSTCDFG 490
ADF P RH+W WH CH HYHSMD F+HYD+L G KVAEGHKASFCLED+ C
Sbjct: 589 RADFRPKAGRHSWVWHECHGHYHSMDIFTHYDIL-TPNGTKVAEGHKASFCLEDTECQED 647
Query: 491 NLKRYACTSH-TQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPKYIVLESDFT 549
KRY C + QG++ GC+D Y DIDCQWIDITDV+PGNYIL+V +NP + V ESDFT
Sbjct: 648 VSKRYECANFGEQGITVGCWDLYRHDIDCQWIDITDVKPGNYILQVVINPNFEVAESDFT 707
Query: 550 NNVVRCNIHYTGRYVSATNCKI 571
NN ++CN Y G + NC I
Sbjct: 708 NNAMKCNCKYDGHRIWVHNCHI 729
>gi|4505011 lysyl oxidase-like 2 precursor [Homo sapiens]
Length = 774
Score = 216 bits (550), Expect = 5e-56
Identities = 107/230 (46%), Positives = 143/230 (62%), Gaps = 8/230 (3%)
Query: 344 GERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCL- 402
GE QG + G+ ++ PDLV + VQ +TY++ ++ L+CA EE CL
Sbjct: 525 GEDVACPQGGVQYGAGVACSETA---PDLVLNAEMVQQTTYLEDRPMFMLQCAMEENCLS 581
Query: 403 ASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYD 462
AS A T Y R LLRF ++ N G +DF P RH W WH CH+HYHSM+ F+HYD
Sbjct: 582 ASAAQTDPTTGY--RRLLRFSSQIHNNGQSDFRPKNGRHAWIWHDCHRHYHSMEVFTHYD 639
Query: 463 LLDAATGKKVAEGHKASFCLEDSTCDFGNLKRYACTSH-TQGLSPGCYDTYNADIDCQWI 521
LL+ G KVAEGHKASFCLED+ C+ K Y C + QG++ GC+D Y DIDCQW+
Sbjct: 640 LLNL-NGTKVAEGHKASFCLEDTECEGDIQKNYECANFGDQGITMGCWDMYRHDIDCQWV 698
Query: 522 DITDVQPGNYILKVHVNPKYIVLESDFTNNVVRCNIHYTGRYVSATNCKI 571
DITDV PG+Y+ +V +NP + V ESD++NN+++C Y G + NC I
Sbjct: 699 DITDVPPGDYLFQVVINPNFEVAESDYSNNIMKCRSRYDGHRIWMYNCHI 748
>gi|67782349 lysyl oxidase-like 4 precursor [Homo sapiens]
Length = 756
Score = 214 bits (546), Expect = 1e-55
Identities = 121/258 (46%), Positives = 149/258 (57%), Gaps = 19/258 (7%)
Query: 322 GPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGL---------PDL 372
G PRA E VR S T A Q G V+ + GR L PDL
Sbjct: 483 GTPRAQEVVMSGVRCSGTEL-------ALQQCQRHGPVHCSHGGGRFLAGVSCMDSAPDL 535
Query: 373 VPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTA 432
V + VQ + Y++ L L CA EE CL+ +A + Y R LLRF ++ N G
Sbjct: 536 VMNAQLVQETAYLEDRPLSQLYCAHEENCLSKSADHMD-WPYGYRRLLRFSTQIYNLGRT 594
Query: 433 DFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDAATGKKVAEGHKASFCLEDSTCDFGNL 492
DF P R +W WH CH+HYHS++ F+HYDLL G KVAEGHKASFCLED+ C G
Sbjct: 595 DFRPKTGRDSWVWHQCHRHYHSIEVFTHYDLL-TLNGSKVAEGHKASFCLEDTNCPTGLQ 653
Query: 493 KRYACTSH-TQGLSPGCYDTYNADIDCQWIDITDVQPGNYILKVHVNPKYIVLESDFTNN 551
+RYAC + QG++ GC+DTY DIDCQW+DITDV PGNYI +V VNP Y V ESDF+NN
Sbjct: 654 RRYACANFGEQGVTVGCWDTYRHDIDCQWVDITDVGPGNYIFQVIVNPHYEVAESDFSNN 713
Query: 552 VVRCNIHYTGRYVSATNC 569
+++C Y G V NC
Sbjct: 714 MLQCRCKYDGHRVWLHNC 731
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 52.8 bits (125), Expect = 9e-07
Identities = 50/175 (28%), Positives = 59/175 (33%), Gaps = 30/175 (17%)
Query: 227 PYQPRARYEEYGGGEELPEYPPQGFYPAPERP----------YVPPPPPPPDGLDRRYSH 276
P P G G P PP G +P P P +PPPP PP H
Sbjct: 218 PSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGALPPGIPPAMPPPPMPPGAA----GH 273
Query: 277 SLYSEGT-----PGFEQAYPDPGPEAAQAHGGDPRL--------GWYPPYANPPPEAYGP 323
S GT PG ++P P P H G ++ G P+A PP G
Sbjct: 274 GPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHGLGHPHAGPPGSG-GQ 332
Query: 324 PRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNY 378
P PP +P PP G G G P RG P L+P Y
Sbjct: 333 PPPRPPPGMP--HPGPPPMGMPPRGPPFGSPMGHPGPMPPHGMRGPPPLMPPHGY 385
Score = 42.7 bits (99), Expect = 9e-04
Identities = 40/124 (32%), Positives = 44/124 (35%), Gaps = 15/124 (12%)
Query: 232 ARYEEYGGGEELPEYPPQGFYPAPERPY-VPPPPPPPDGLDRRYSHSLYSEGTPGFEQAY 290
A + +G G P G P P P +P P PPP G+ R P F
Sbjct: 312 AHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPR---------GPPFGSPM 362
Query: 291 PDPGPEAAQAHGGDPRLGWYPP--YANPP-PEAYGPPRALEPPYLPVRSSDTPPPGGERN 347
PGP G P L PP Y PP P YG R PP P PP G R
Sbjct: 363 GHPGPMPPHGMRGPPPL--MPPHGYTGPPRPPPYGYQRGPLPPPRPTPRPPVPPRGPLRG 420
Query: 348 GAQQ 351
Q
Sbjct: 421 PLPQ 424
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 52.4 bits (124), Expect = 1e-06
Identities = 79/331 (23%), Positives = 101/331 (30%), Gaps = 39/331 (11%)
Query: 159 SASAFASTYRQQPSYPQQFPYPQAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAA 218
S +F ++ P FP+P F + + + D G G G G GA A
Sbjct: 387 SKGSFGGVLQKFPGCGGLFPHPYT-FPAAAAAFSLCHKKEDAGAAAEALGGAGAG-GAGA 444
Query: 219 VASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERP-------YVPPPPPPPDGLD 271
AG+ + P R + + YPP + P P Y+ PPP PP L
Sbjct: 445 APKAGLSGLFWPAGRKDAF--------YPPFCMFWPPRTPGGLPVPTYLQPPPQPPSALG 496
Query: 272 RRYSHSLYSEGTPGFEQAYPD---PGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALE 328
E QA+ D PG A A PP P A GP
Sbjct: 497 -----CALGESPALLRQAFLDLAEPGGAAGSAEAAP------PPGQPPQVVANGPGSGPP 545
Query: 329 PPYLPVRSSDT---PPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYV 385
PP S D PPGG G G P + V A
Sbjct: 546 PPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPAP--- 602
Query: 386 QRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEW 445
HL R A S+A+ P D L + + G P H
Sbjct: 603 HHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKL--HGASAGAPHSAQTHPHHHHHP 660
Query: 446 HSCHQHYHSMDEFSHYDLLDAATGKKVAEGH 476
H H H+H S LL + +E H
Sbjct: 661 HHHHHHHHPPQPPSPLLLLPPQPDEPGSERH 691
Score = 37.4 bits (85), Expect = 0.038
Identities = 46/186 (24%), Positives = 65/186 (34%), Gaps = 39/186 (20%)
Query: 138 GMARARTSVSQQRHGGS-----------ASSVSASAFASTYRQQPSYPQQFPYPQAPFVS 186
G A +R ++ + GGS A SV+A+ + + P P P +
Sbjct: 549 GGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLL 608
Query: 187 QYENYDPASRTYDQGFVYYRPAGGGVGAGAAAV---ASAGVIYPYQPRARYEEYGGGEEL 243
+ S + F RP GG A + A ASAG + Q + +
Sbjct: 609 EGRKAGGGSYHHSSAF---RPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHHPHHHHH 665
Query: 244 PEYPPQG------------------FYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPG 285
+PPQ +PAP P PPPPPPP + L S G G
Sbjct: 666 HHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPP--PPPPPPPPLAQHPHHRGLLSPG--G 721
Query: 286 FEQAYP 291
+YP
Sbjct: 722 TSCSYP 727
Score = 33.9 bits (76), Expect = 0.42
Identities = 45/148 (30%), Positives = 52/148 (35%), Gaps = 29/148 (19%)
Query: 208 AGGGVGAGAAAVASAGV----IYPYQPRARYEEYGGGEELPEYPP-QGFYPAPERPYVPP 262
AG GVGAGA A A AG YP P +GG L ++P G +P PY P
Sbjct: 358 AGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKGSFGG--VLQKFPGCGGLFP---HPYTFP 412
Query: 263 PPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGW--------YPPYA 314
L H G G A G L W YPP+
Sbjct: 413 AAAAAFSL----CHKKEDAGAAAEALGGAGAGGAGAAPKAGLSGLFWPAGRKDAFYPPFC 468
Query: 315 NPPPEAYGPPRALEPPYLPVRSSDTPPP 342
+ PPR P LPV + PPP
Sbjct: 469 -----MFWPPRT--PGGLPVPTYLQPPP 489
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 52.4 bits (124), Expect = 1e-06
Identities = 79/331 (23%), Positives = 101/331 (30%), Gaps = 39/331 (11%)
Query: 159 SASAFASTYRQQPSYPQQFPYPQAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAA 218
S +F ++ P FP+P F + + + D G G G G GA A
Sbjct: 387 SKGSFGGVLQKFPGCGGLFPHPYT-FPAAAAAFSLCHKKEDAGAAAEALGGAGAG-GAGA 444
Query: 219 VASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERP-------YVPPPPPPPDGLD 271
AG+ + P R + + YPP + P P Y+ PPP PP L
Sbjct: 445 APKAGLSGLFWPAGRKDAF--------YPPFCMFWPPRTPGGLPVPTYLQPPPQPPSALG 496
Query: 272 RRYSHSLYSEGTPGFEQAYPD---PGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALE 328
E QA+ D PG A A PP P A GP
Sbjct: 497 -----CALGESPALLRQAFLDLAEPGGAAGSAEAAP------PPGQPPQVVANGPGSGPP 545
Query: 329 PPYLPVRSSDT---PPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYV 385
PP S D PPGG G G P + V A
Sbjct: 546 PPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPAP--- 602
Query: 386 QRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEW 445
HL R A S+A+ P D L + + G P H
Sbjct: 603 HHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKL--HGASAGAPHSAQTHPHHHHHP 660
Query: 446 HSCHQHYHSMDEFSHYDLLDAATGKKVAEGH 476
H H H+H S LL + +E H
Sbjct: 661 HHHHHHHHPPQPPSPLLLLPPQPDEPGSERH 691
Score = 37.0 bits (84), Expect = 0.049
Identities = 46/186 (24%), Positives = 64/186 (34%), Gaps = 39/186 (20%)
Query: 138 GMARARTSVSQQRHGGS-----------ASSVSASAFASTYRQQPSYPQQFPYPQAPFVS 186
G A +R ++ + GGS A SV+A+ + + P P P +
Sbjct: 549 GGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLL 608
Query: 187 QYENYDPASRTYDQGFVYYRPAGGGVGAGAAAV---ASAGVIYPYQPRARYEEYGGGEEL 243
+ S + F RP GG A + A ASAG + Q + +
Sbjct: 609 EGRKAGGGSYHHSSAF---RPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHHPHHHHH 665
Query: 244 PEYPPQG------------------FYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPG 285
+PPQ +PAP P PPPPPPP + L S G G
Sbjct: 666 HHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPP--PPPPPPPPLAQHPHHRGLLSPG--G 721
Query: 286 FEQAYP 291
YP
Sbjct: 722 TSCCYP 727
Score = 33.9 bits (76), Expect = 0.42
Identities = 45/148 (30%), Positives = 52/148 (35%), Gaps = 29/148 (19%)
Query: 208 AGGGVGAGAAAVASAGV----IYPYQPRARYEEYGGGEELPEYPP-QGFYPAPERPYVPP 262
AG GVGAGA A A AG YP P +GG L ++P G +P PY P
Sbjct: 358 AGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKGSFGG--VLQKFPGCGGLFP---HPYTFP 412
Query: 263 PPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGW--------YPPYA 314
L H G G A G L W YPP+
Sbjct: 413 AAAAAFSL----CHKKEDAGAAAEALGGAGAGGAGAAPKAGLSGLFWPAGRKDAFYPPFC 468
Query: 315 NPPPEAYGPPRALEPPYLPVRSSDTPPP 342
+ PPR P LPV + PPP
Sbjct: 469 -----MFWPPRT--PGGLPVPTYLQPPP 489
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 52.4 bits (124), Expect = 1e-06
Identities = 79/331 (23%), Positives = 101/331 (30%), Gaps = 39/331 (11%)
Query: 159 SASAFASTYRQQPSYPQQFPYPQAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAA 218
S +F ++ P FP+P F + + + D G G G G GA A
Sbjct: 387 SKGSFGGVLQKFPGCGGLFPHPYT-FPAAAAAFSLCHKKEDAGAAAEALGGAGAG-GAGA 444
Query: 219 VASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERP-------YVPPPPPPPDGLD 271
AG+ + P R + + YPP + P P Y+ PPP PP L
Sbjct: 445 APKAGLSGLFWPAGRKDAF--------YPPFCMFWPPRTPGGLPVPTYLQPPPQPPSALG 496
Query: 272 RRYSHSLYSEGTPGFEQAYPD---PGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALE 328
E QA+ D PG A A PP P A GP
Sbjct: 497 -----CALGESPALLRQAFLDLAEPGGAAGSAEAAP------PPGQPPQVVANGPGSGPP 545
Query: 329 PPYLPVRSSDT---PPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYV 385
PP S D PPGG G G P + V A
Sbjct: 546 PPAGGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPAP--- 602
Query: 386 QRAHLYSLRCAAEEKCLASTAYAPEATDYDVRVLLRFPQRVKNQGTADFLPNRPRHTWEW 445
HL R A S+A+ P D L + + G P H
Sbjct: 603 HHPHLLEGRKAGGGSYHHSSAFRPVGGKDDAESLAKL--HGASAGAPHSAQTHPHHHHHP 660
Query: 446 HSCHQHYHSMDEFSHYDLLDAATGKKVAEGH 476
H H H+H S LL + +E H
Sbjct: 661 HHHHHHHHPPQPPSPLLLLPPQPDEPGSERH 691
Score = 37.0 bits (84), Expect = 0.049
Identities = 46/186 (24%), Positives = 64/186 (34%), Gaps = 39/186 (20%)
Query: 138 GMARARTSVSQQRHGGS-----------ASSVSASAFASTYRQQPSYPQQFPYPQAPFVS 186
G A +R ++ + GGS A SV+A+ + + P P P +
Sbjct: 549 GGAGSRDALFESPPGGSGGDCSAGSTPPADSVAAAGAGAAAAGSGPAGSRVPAPHHPHLL 608
Query: 187 QYENYDPASRTYDQGFVYYRPAGGGVGAGAAAV---ASAGVIYPYQPRARYEEYGGGEEL 243
+ S + F RP GG A + A ASAG + Q + +
Sbjct: 609 EGRKAGGGSYHHSSAF---RPVGGKDDAESLAKLHGASAGAPHSAQTHPHHHHHPHHHHH 665
Query: 244 PEYPPQG------------------FYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPG 285
+PPQ +PAP P PPPPPPP + L S G G
Sbjct: 666 HHHPPQPPSPLLLLPPQPDEPGSERHHPAPPPP--PPPPPPPPLAQHPHHRGLLSPG--G 721
Query: 286 FEQAYP 291
YP
Sbjct: 722 TSCCYP 727
Score = 33.9 bits (76), Expect = 0.42
Identities = 45/148 (30%), Positives = 52/148 (35%), Gaps = 29/148 (19%)
Query: 208 AGGGVGAGAAAVASAGV----IYPYQPRARYEEYGGGEELPEYPP-QGFYPAPERPYVPP 262
AG GVGAGA A A AG YP P +GG L ++P G +P PY P
Sbjct: 358 AGVGVGAGAGAGAGAGAKGPRSYPVIPVPSKGSFGG--VLQKFPGCGGLFP---HPYTFP 412
Query: 263 PPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGW--------YPPYA 314
L H G G A G L W YPP+
Sbjct: 413 AAAAAFSL----CHKKEDAGAAAEALGGAGAGGAGAAPKAGLSGLFWPAGRKDAFYPPFC 468
Query: 315 NPPPEAYGPPRALEPPYLPVRSSDTPPP 342
+ PPR P LPV + PPP
Sbjct: 469 -----MFWPPRT--PGGLPVPTYLQPPP 489
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 50.1 bits (118), Expect = 6e-06
Identities = 42/124 (33%), Positives = 44/124 (35%), Gaps = 44/124 (35%)
Query: 212 VGAGAAAVASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPPPPDGLD 271
V GAAAVA+ V+ P LP PP GF P P PPPPPPP
Sbjct: 662 VTPGAAAVAAPSVLAP--------------TLPLPPPPGFPPLPP----PPPPPPPQ--- 700
Query: 272 RRYSHSLYSEGTPGFEQA--YPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALEP 329
PGF P P P AH P PPP PP P
Sbjct: 701 ------------PGFPMPPPLPPPPPPPPPAH---------PAVTVPPPPLPAPPGVPPP 739
Query: 330 PYLP 333
P LP
Sbjct: 740 PILP 743
Score = 30.4 bits (67), Expect = 4.6
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 12/77 (15%)
Query: 257 RPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPPYANP 316
R PPP PP + L + PG P P + + GG P GW P +
Sbjct: 430 RAPAPPPLPPAEPLAKE---------KPGTPPGPPPPDTNSMEL-GGRPTFGWSPEPCDS 479
Query: 317 P--PEAYGPPRALEPPY 331
P P P E P+
Sbjct: 480 PGTPTLESSPAGPEKPH 496
>gi|6912582 penta-EF-hand domain containing 1 [Homo sapiens]
Length = 284
Score = 49.3 bits (116), Expect = 1e-05
Identities = 40/111 (36%), Positives = 46/111 (41%), Gaps = 27/111 (24%)
Query: 214 AGAAAVASAGVIYPYQPRARYEEYGGGEELPEYPPQGFY--PAPERPYVPPPPPPPDGLD 271
AG A A G YP P + +YG G PP G Y PAP PY PP P G
Sbjct: 14 AGQAPGAPPGSYYPGPPNSG-GQYGSG-----LPPGGGYGGPAPGGPYGPPAGGGPYG-- 65
Query: 272 RRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYG 322
+ ++ GTPG GP A GG PY PPP +YG
Sbjct: 66 -HPNPGMFPSGTPG--------GPYGGAAPGG--------PYGQPPPSSYG 99
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 49.3 bits (116), Expect = 1e-05
Identities = 43/138 (31%), Positives = 54/138 (39%), Gaps = 13/138 (9%)
Query: 208 AGGGVGAGAAAVASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPP-- 265
+G G + + + + G Y P A YG LP Y P + P P P VPPPP
Sbjct: 440 SGEGYQSLQSMMKTEGPSYGALPPA----YGPPAHLP-YHPHVYPPNPPPPPVPPPPASF 494
Query: 266 PPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPR 325
PP + Y P + +P P P H P PP PP +Y PP
Sbjct: 495 PPPAIPPPTPG--YPPPPPTYNPNFPPPPPRLPPTHAVPPHP---PPGLGLPPASYPPP- 548
Query: 326 ALEPPYLPVRSSDTPPPG 343
A+ P P PPPG
Sbjct: 549 AVPPGGQPPVPPPIPPPG 566
Score = 42.7 bits (99), Expect = 9e-04
Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 19/118 (16%)
Query: 244 PEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLY--SEGTPGFEQAYPDPGPEAAQ-- 299
P P + P P+ PPPPPP + + S Y EG + GP
Sbjct: 403 PPAHPAPVHQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALP 462
Query: 300 -AHGGDPRLGWYP--------------PYANPPPEAYGPPRALEPPYLPVRSSDTPPP 342
A+G L ++P P A+ PP A PP PP P + + PPP
Sbjct: 463 PAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTYNPNFPPP 520
Score = 31.6 bits (70), Expect = 2.1
Identities = 59/227 (25%), Positives = 74/227 (32%), Gaps = 34/227 (14%)
Query: 169 QQPSYPQQFPYPQAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPY 228
QQP P P PQ P V Q + + + Q +PA A S P
Sbjct: 274 QQP--PSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQPKKPSPQPSSPR 331
Query: 229 QPRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPP--PPPDGLDRRYSHSLYSEGTPGF 286
Q + E PP P E + P PP PPPD + + E P
Sbjct: 332 QVKRAVVVSPKEENKAAEPPPPKIPKIETTHPPLPPAHPPPDR--KPPLAAALGEAEP-- 387
Query: 287 EQAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGER 346
PGP A D PP A+P P PP PP PPP
Sbjct: 388 ------PGPVDAT----DLPKVQIPPPAHPAPVHQPPPLPHRPP--------PPPPSSYM 429
Query: 347 NGAQQGRLSVGSVYRPNQNGRGLPDLV--PDPNY-VQASTYVQRAHL 390
G +S S Y + + L ++ P+Y Y AHL
Sbjct: 430 TG-----MSTTSSYMSGEGYQSLQSMMKTEGPSYGALPPAYGPPAHL 471
Score = 30.4 bits (67), Expect = 4.6
Identities = 28/97 (28%), Positives = 33/97 (34%), Gaps = 19/97 (19%)
Query: 171 PSYPQQFPYPQAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPYQP 230
P P FP P P Y P TY+ F P + + P+ P
Sbjct: 488 PPPPASFPPPAIP--PPTPGYPPPPPTYNPNFPPPPPR----------LPPTHAVPPHPP 535
Query: 231 RARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPPPP 267
G G YPP P + P VPPP PPP
Sbjct: 536 P------GLGLPPASYPPPAVPPGGQPP-VPPPIPPP 565
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 48.9 bits (115), Expect = 1e-05
Identities = 33/111 (29%), Positives = 43/111 (38%), Gaps = 16/111 (14%)
Query: 209 GGGVGAGAAAVASAGVIYPYQPRARYEEYGGGE-------ELPEY-PPQGFYPAPE---- 256
G G GA A+A ++P P YG G +LP Y PP + A
Sbjct: 241 GAGAAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAA 300
Query: 257 ----RPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGG 303
P+ PPPPPPP G + + + A P P P +A GG
Sbjct: 301 AAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGG 351
Score = 33.1 bits (74), Expect = 0.71
Identities = 31/102 (30%), Positives = 37/102 (36%), Gaps = 27/102 (26%)
Query: 298 AQAHGGDPRLG--WYPPYANPPPEAYG-PPRALE-----PPYLPVRS------------- 336
A GDP +PP PPP AYG P PPY P +
Sbjct: 244 AAGGAGDPAAAAALFPPAPPPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAA 303
Query: 337 ----SDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVP 374
S PPP A+ R + G YRP+ G LP +P
Sbjct: 304 FHPHSPPPPPPPHGAAAELARTAFG--YRPHPLGAALPGPLP 343
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 48.1 bits (113), Expect = 2e-05
Identities = 70/285 (24%), Positives = 101/285 (35%), Gaps = 44/285 (15%)
Query: 77 LAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTVRGQARHPFGFGQVPDNWREVAVGDS 136
+ G +A +R G P R P+ P PGRV + + + G G N R G
Sbjct: 1013 IGGGGRAARRPPEGHPTPR--PASPEPGRVATVLASVKHKEAIGPGGEVVNRRRTLSGPV 1070
Query: 137 TGMARARTSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYP-QAPFVSQYENYDPAS 195
TG+ + +R G ++ T RQ+P P + + P +++ E
Sbjct: 1071 TGLL-----ATARRGPGESADPGPFVEDGTGRQRPRGPSKGEAGVEGPPLAKVEASATLK 1125
Query: 196 RTY---------------DQGFVYYRPAGGGVGAGAAAVASAGVIYPYQPRARYE---EY 237
R + V RP AG V + R E
Sbjct: 1126 RRIRAKQNQQENVKFILTESDTVKRRPKAKEREAGPEPPPPLSVYHNGTGTVRRRPASEQ 1185
Query: 238 GGGEELPEYPPQGFYPAPERPYVPPPPPP-------------PDGLDRRYSHSLYSEGTP 284
G ELP PP P + ++PP PPP P + + L TP
Sbjct: 1186 AGPPELPPPPPPAEPPPTDLAHLPPLPPPEGEARKPAKPPVSPKPVLTQPVPKLQGSPTP 1245
Query: 285 GFEQA-YPDPG-PEAAQAHGGDPRLGWYPPYANPPPEAYGPPRAL 327
++ P PG PE +AHG P + PP PPP A P +A+
Sbjct: 1246 TSKKVPLPGPGSPEVKRAHGTPPPVSPKPP---PPPTAPKPVKAV 1287
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 47.8 bits (112), Expect = 3e-05
Identities = 55/208 (26%), Positives = 70/208 (33%), Gaps = 49/208 (23%)
Query: 144 TSVSQQRHGGSASSVSASAFASTYRQQPSYPQQFPYPQAPFVSQYENYDPASRTYDQGFV 203
T V Q G +V AS++ P P F PA +Y
Sbjct: 227 TLVYQNGSIGCVENVDASSYPP-----PPQSDSASSPSPSFSEDNLPPPPAEFSY----- 276
Query: 204 YYRPAGGGVGAGAAAVASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPP- 262
P G+G A + V+ P P P PP G P P+ + PP
Sbjct: 277 ---PVDNQRGSGLAGPKRSSVVSPSHP-------------PPAPPLGSPPGPKPGFAPPP 320
Query: 263 --PPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEA 320
PPPPP + G+PG P P P + H P +A PPP
Sbjct: 321 APPPPPPPMIGIPPPPPPVGFGSPG---TPPPPSPPSFPPH---------PDFAAPPPPP 368
Query: 321 YGPPRALEPPYLPVRSSDTPPPGGERNG 348
PP A + P LP PPP + G
Sbjct: 369 --PPPAADYPTLP------PPPLSQPTG 388
>gi|209180481 Cas-Br-M (murine) ecotropic retroviral transforming
sequence-like 1 [Homo sapiens]
Length = 491
Score = 47.8 bits (112), Expect = 3e-05
Identities = 43/142 (30%), Positives = 58/142 (40%), Gaps = 27/142 (19%)
Query: 230 PRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPG--FE 287
P + EY G + + +P + P + + PPPPPP + H + GTP +
Sbjct: 315 PAHHHPEYQG-QPVVSHP---HHIMPPQQHYAPPPPPPPPISHPMPHPPQAAGTPHLVYS 370
Query: 288 QAYPDPGPEAAQAHGGDPR--LGWYPPYAN------PPPEAYGPPRALEPPY------LP 333
QA P P A P + PPY N PPP+ GPP PP+ LP
Sbjct: 371 QAPPPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLP 430
Query: 334 VRSSD----TPP---PGGERNG 348
+ D +PP PGG G
Sbjct: 431 QFTEDQGTLSPPFTQPGGMSPG 452
Score = 37.7 bits (86), Expect = 0.029
Identities = 32/107 (29%), Positives = 36/107 (33%), Gaps = 19/107 (17%)
Query: 244 PEYPPQGFYPAPERPYV---PPPPPPPDG----LDRRYSHSLYSEGTPGFEQAYPDPGPE 296
P PP G A PY+ PP PPPP + H P F + P
Sbjct: 383 PITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPPPHHYNPNSLPQFTEDQGTLSPP 442
Query: 297 AAQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPG 343
Q G P + P PPP GPP S TP PG
Sbjct: 443 FTQPGGMSPGIWPAPRGPPPPPRLQGPP------------SQTPLPG 477
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 47.0 bits (110), Expect = 5e-05
Identities = 57/180 (31%), Positives = 69/180 (38%), Gaps = 25/180 (13%)
Query: 243 LPEYPPQGFYPAPE-RPYVPP---PPPPPDGLDRRYSHSLYSEGTPGFEQAYP---DPGP 295
+P PP G PAP RP PP PP PP G L G PG P PGP
Sbjct: 407 MPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGA----PPFLRPPGMPGLRGPLPRLLPPGP 462
Query: 296 EAAQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLS 355
+ G P PP P P GPP L PP P PPP R G R
Sbjct: 463 PPGRPPGPPP---GPPPGLPPGPPPRGPPPRLPPPAPP----GIPPP---RPGMM--RPP 510
Query: 356 VGSVYRPNQNGRGLPDLVPDPNYVQA-STYVQRAHLYSLRCAA-EEKCLASTAYAPEATD 413
+ P G P +P+P + A +QR A E+K A+ + P+ T+
Sbjct: 511 LVPPLGPAPPGLFPPAPLPNPGVLSAPPNLIQRPKADDTSAATIEKKATATISAKPQITN 570
Score = 30.0 bits (66), Expect = 6.0
Identities = 14/33 (42%), Positives = 14/33 (42%)
Query: 311 PPYANPPPEAYGPPRALEPPYLPVRSSDTPPPG 343
PP PPP P L PP P PPPG
Sbjct: 405 PPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPG 437
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 46.6 bits (109), Expect = 6e-05
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 14/110 (12%)
Query: 250 GFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGW 309
G PAP ++PPPPPPP D P F + PD P ++ G
Sbjct: 544 GGLPAPPDDFLPPPPPPPPLDDPE-----LPPPPPDFMEPPPDFVPPPPPSYAGIAGSEL 598
Query: 310 YPPYANPP-------PEAYGPPRAL--EPPYLPVRSSDTPPPGGERNGAQ 350
PP PP P++ PP A+ PP P R + PGG G Q
Sbjct: 599 PPPPPPPPAPAPAPVPDSARPPPAVAKRPPVPPKRQENPGHPGGAGGGEQ 648
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 46.2 bits (108), Expect = 8e-05
Identities = 44/139 (31%), Positives = 46/139 (33%), Gaps = 23/139 (16%)
Query: 242 ELPEYPPQGFYPAPERPYVPPPP----PPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEA 297
+ P PP G P P P PPPP PPP G P P P
Sbjct: 234 QTPPRPPLG-PPGPPGPPGPPPPGQVLPPP------------LAGPPNRGDRPPPPVLFP 280
Query: 298 AQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVG 357
Q G P LG PP PP YGPP PP PPP G G L
Sbjct: 281 GQPFG-QPPLGPLPPGPPPPVPGYGPPPGPPPP-----QQGPPPPPGPFPPRPPGPLGPP 334
Query: 358 SVYRPNQNGRGLPDLVPDP 376
P + G P P P
Sbjct: 335 LTLAPPPHLPGPPPGAPPP 353
Score = 42.4 bits (98), Expect = 0.001
Identities = 34/98 (34%), Positives = 38/98 (38%), Gaps = 12/98 (12%)
Query: 246 YPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDP 305
+P Q F P P P PPPP G +G P P PGP + G
Sbjct: 279 FPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPP------PPPGPFPPRPPGP-- 330
Query: 306 RLGWYPPYA-NPPPEAYGPPRALEPPYLPVRSSDTPPP 342
LG PP PPP GPP PP V + PPP
Sbjct: 331 -LG--PPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPP 365
>gi|130492454 zinc finger RNA binding protein 2 isoform 1 [Homo
sapiens]
Length = 939
Score = 46.2 bits (108), Expect = 8e-05
Identities = 52/207 (25%), Positives = 72/207 (34%), Gaps = 40/207 (19%)
Query: 172 SYPQQFPYPQAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYPYQPR 231
S+ P QAP V E+ PAS T G+ Y G +SA ++ Y P
Sbjct: 140 SHSHAQPPQQAPIV---ESGQPAS-TLSSGYTY------PTATGVQPESSASIVTSYPPP 189
Query: 232 ARYEEYGGGEELPEYP--PQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQA 289
+ Y P YP Y A Y P PPPP G ++
Sbjct: 190 S-YNPTCTAYTAPSYPNYDASVYSAASPFYPPAQPPPPPGPPQQL--------------- 233
Query: 290 YPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPP------- 342
P P A G PR PP + P PR L+ Y + P
Sbjct: 234 ---PPPPAPAGSGSSPRADSKPPLPSKLPRPKAGPRQLQLHYCDICKISCAGPQTYREHL 290
Query: 343 GGERNGAQQGRLSVGSVYRPNQNGRGL 369
GG+++ ++ G +PN + RG+
Sbjct: 291 GGQKHRKKEAAQKTG--VQPNGSPRGV 315
>gi|59806357 submaxillary gland androgen regulated protein 3 homolog
A precursor [Homo sapiens]
Length = 134
Score = 46.2 bits (108), Expect = 8e-05
Identities = 38/105 (36%), Positives = 42/105 (40%), Gaps = 17/105 (16%)
Query: 246 YPPQGFYPAPE------RPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDP--GPEA 297
YPP P P +VPPP PPP G R+ L PG P P GP
Sbjct: 30 YPPGPLAPPPPPCFPFGTGFVPPPHPPPYG-PGRFPPPLSPPYGPGRIPPSPPPPYGPGR 88
Query: 298 AQAHGGDPRLGWYPPYANPP--PEAYGPPRALEPPYLPVRSSDTP 340
Q+H P G P Y PP P Y P PP+ PV S P
Sbjct: 89 IQSHSLPPPYG--PGYPQPPSQPRPYPP----GPPFFPVNSPTDP 127
Score = 36.6 bits (83), Expect = 0.064
Identities = 35/101 (34%), Positives = 40/101 (39%), Gaps = 14/101 (13%)
Query: 283 TPGFEQAYP----DPGPEAAQAHGGDPRLGWYPPYANPPPEAYGP---PRALEPPYLPVR 335
TPG Q P PGP A P + P +PPP YGP P L PPY P R
Sbjct: 18 TPGESQRGPRGPYPPGPLAPPPPPCFPFGTGFVPPPHPPP--YGPGRFPPPLSPPYGPGR 75
Query: 336 SSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDP 376
+PPP GR+ S+ P G P P P
Sbjct: 76 IPPSPPP-----PYGPGRIQSHSLPPPYGPGYPQPPSQPRP 111
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 46.2 bits (108), Expect = 8e-05
Identities = 64/243 (26%), Positives = 84/243 (34%), Gaps = 37/243 (15%)
Query: 169 QQPSYPQQFPYPQAPFVSQYENYDPASRTYDQGF-VYYRPAGGGVGAGAAAVASAGVIYP 227
QQP Q P+ P ++ P D V + G G G+A AS+ P
Sbjct: 75 QQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAP-P 133
Query: 228 YQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFE 287
P G G PP AP PP PP G+ + + G P
Sbjct: 134 ATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAP--PPTPPSSGVP---TTPPQAGGPPPPP 188
Query: 288 QAYPDPGPEAAQAHG-GDPRLGWYP---------------PYANPPPEAYGPPRA---LE 328
A P PGP Q G G P+ G P + PP G PR
Sbjct: 189 AAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQHH 248
Query: 329 PPYLPVRSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQASTYVQRA 388
PPY + PPPGG G + ++S ++ N + L+ P TY QR
Sbjct: 249 PPY-HQQHHQGPPPGGP-GGRSEEKISDSEGFKANLS------LLRRPG---EKTYTQRC 297
Query: 389 HLY 391
L+
Sbjct: 298 RLF 300
Score = 42.0 bits (97), Expect = 0.002
Identities = 36/138 (26%), Positives = 48/138 (34%), Gaps = 8/138 (5%)
Query: 210 GGVGAGAAAVASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPPPPDG 269
G +G G I P P + ++ + P+ PP P +P+ PPPP
Sbjct: 45 GPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPP-- 102
Query: 270 LDRRYSHSLYSEG---TPGFEQAYP--DPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPP 324
+ S + ++G PG A P P A G P P PPP P
Sbjct: 103 -PQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAP 161
Query: 325 RALEPPYLPVRSSDTPPP 342
PP P T PP
Sbjct: 162 PGAPPPTPPSSGVPTTPP 179
>gi|195963316 PWWP domain containing 2A isoform b [Homo sapiens]
Length = 755
Score = 46.2 bits (108), Expect = 8e-05
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 253 PAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPP 312
P + P +PPPPPPP L R S E+ AA A G P L P
Sbjct: 61 PQADEPPLPPPPPPPGELAR--SPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP--PS 116
Query: 313 YANPPPEAYGPPRALEPPY-LPVRSSDTPPPGGERNGAQ 350
A+PP + P EPP PV + PP GG+ +Q
Sbjct: 117 PASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQ 155
>gi|153791982 PWWP domain containing 2A isoform a [Homo sapiens]
Length = 560
Score = 46.2 bits (108), Expect = 8e-05
Identities = 34/99 (34%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 253 PAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPP 312
P + P +PPPPPPP L R S E+ AA A G P L P
Sbjct: 61 PQADEPPLPPPPPPPGELAR--SPEAVGPELEAEEKLSVRVAESAAAAPQGGPELP--PS 116
Query: 313 YANPPPEAYGPPRALEPPY-LPVRSSDTPPPGGERNGAQ 350
A+PP + P EPP PV + PP GG+ +Q
Sbjct: 117 PASPPEQPPAPEEREEPPLPQPVAPALVPPAGGDSTVSQ 155
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 46.2 bits (108), Expect = 8e-05
Identities = 40/126 (31%), Positives = 47/126 (37%), Gaps = 30/126 (23%)
Query: 243 LPEYPPQGFYPAPERPYVPPPPP---PPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQ 299
LP PP P+ P +PP P PP G+ P + P PG +
Sbjct: 530 LPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVM-------PPSLPTSVPPPGMPPSL 582
Query: 300 AHGGDPRLGWYPPYANPPP--EAYGPPRALEPPY-----------LPVRSSDTPPPGGER 346
+ G PP PPP + GPP L PP LP SS TPPPG
Sbjct: 583 SSAG-------PPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPP 635
Query: 347 NGAQQG 352
G QG
Sbjct: 636 PGVPQG 641
Score = 45.4 bits (106), Expect = 1e-04
Identities = 47/174 (27%), Positives = 67/174 (38%), Gaps = 31/174 (17%)
Query: 241 EELPEYPP--QGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPD-----P 293
E PE PP G Y P + Y+PPP PPP S P Q+ P P
Sbjct: 144 ESPPESPPVPPGSYMPPSQSYMPPPQPPPSYYPPTSSQPYLPPAQPSPSQSPPSQSYLAP 203
Query: 294 GPE-AAQAHGGDPRLGWYPPY-----ANP--PPEAYGPPRALEPPYLPVRSSDTPP--PG 343
P ++ + L Y A+P P + + + L PP PP P
Sbjct: 204 TPSYSSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPP---------PPSAPP 254
Query: 344 GERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYV---QASTYVQRAHLYSLR 394
G + QQ L G+ + + + P+ PDP+ + + Y R HL SL+
Sbjct: 255 GNKTTVQQEPLESGAKNKSTEQQQAAPE--PDPSTMTPQEQQQYWYRQHLLSLQ 306
Score = 40.8 bits (94), Expect = 0.003
Identities = 31/109 (28%), Positives = 44/109 (40%), Gaps = 12/109 (11%)
Query: 244 PEYPPQGFYPAPERPYVPPPPPPPDGL----DRRYSHSL---YSEGTPGFEQAYPDPGPE 296
P P G Y + P P PPPP L ++Y H + +G PG + PE
Sbjct: 89 PPVMPGGGYGDWQPPPPPMPPPPGPALSYQKQQQYKHQMLHHQRDGPPGLVPMELESPPE 148
Query: 297 AAQAHGGD---PRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPP 342
+ G P + PP PP +Y PP + +P P + S + P
Sbjct: 149 SPPVPPGSYMPPSQSYMPP--PQPPPSYYPPTSSQPYLPPAQPSPSQSP 195
Score = 30.4 bits (67), Expect = 4.6
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 311 PPYANPPPEAYGPPRALEPPYLPVR-SSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGL 369
PP P A PP + PP +P + PPPG + + G V + P+ + G
Sbjct: 544 PPVMPPALPATVPPPGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPV--LPPPSLSSAGP 601
Query: 370 PDLVPDPN 377
P ++P P+
Sbjct: 602 PPVLPPPS 609
Score = 29.6 bits (65), Expect = 7.9
Identities = 41/154 (26%), Positives = 54/154 (35%), Gaps = 37/154 (24%)
Query: 237 YGGGEELPEYPPQGFYPAPERPYVPPPPP---PPDGLDRRYSHSL-----YSEGTPGFEQ 288
YGG YPP P VPPPPP P YS S S G F +
Sbjct: 8 YGGSSH---YPP---------PPVPPPPPVALPEASPGPGYSSSTTPAAPSSSGFMSFRE 55
Query: 289 AYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGPPRAL--------EPPYLPVRSSDTP 340
+ + Q H + P + PPP PP + +PP P+ P
Sbjct: 56 QHLAQLQQLQQMHQKQMQCVLQPHHLPPPP--LPPPPVMPGGGYGDWQPPPPPM----PP 109
Query: 341 PPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVP 374
PPG + +Q + ++ G P LVP
Sbjct: 110 PPGPALSYQKQQQYKHQMLHHQRD---GPPGLVP 140
Score = 29.6 bits (65), Expect = 7.9
Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 295 PEAAQAHGGDPRLGWYPP---YANPPPEAYGPPRALEPPYLPVRSS--DTPPP 342
P+ ++ R G YPP Y PPP P + P P RSS T PP
Sbjct: 1491 PQESRLQNTSSRPGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVPVTRPP 1543
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 45.8 bits (107), Expect = 1e-04
Identities = 33/107 (30%), Positives = 41/107 (38%), Gaps = 13/107 (12%)
Query: 244 PEYPPQGFYPAPERPYV------PPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEA 297
P PP P P + PPPP PP L + S G+PG P P P
Sbjct: 97 PPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGL----PPPAPPG 152
Query: 298 AQAHGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGG 344
P++ + P GPP ++PP L VR PPP G
Sbjct: 153 FSGPVSSPQIN---STVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPG 196
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.8 bits (107), Expect = 1e-04
Identities = 42/153 (27%), Positives = 55/153 (35%), Gaps = 22/153 (14%)
Query: 244 PEYPPQGFYPAPERPYVPPPP-----PPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAA 298
P PP G P+ R VPPPP PP R + S P + P P P ++
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSS 325
Query: 299 QAHGGDPRL--------GWYPPYAN-------PPPEAYGPPRALEPPYLPVRSSDTPPPG 343
+ PRL PP + PPP + PP + P P RS PPP
Sbjct: 326 SGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDP--PGRSGPLPPPP 383
Query: 344 GERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDP 376
R + P+++G P P P
Sbjct: 384 PVSRNGSTSRALPATPQLPSRSGVDSPRSGPRP 416
Score = 40.0 bits (92), Expect = 0.006
Identities = 45/157 (28%), Positives = 58/157 (36%), Gaps = 41/157 (26%)
Query: 253 PAPERPYVPPP-----------PPPPDGLDRRYSHSLYSEGTP----GFEQAYPDPGP-- 295
P P+R +PPP PPP R S ++ G+P G Q P P P
Sbjct: 162 PEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPP 221
Query: 296 ----EAAQAHGGDPR---LGWYPPYANPPPEAYGPPRALE----PPYLPV-------RSS 337
GG R L P++N PP P RAL+ PP PV R +
Sbjct: 222 FPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREA 281
Query: 338 DTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVP 374
PPP Q + V S RP+ + + P P
Sbjct: 282 VPPPP------PQNNKPPVPSTPRPSASSQAPPPPPP 312
Score = 37.7 bits (86), Expect = 0.029
Identities = 49/157 (31%), Positives = 54/157 (34%), Gaps = 32/157 (20%)
Query: 215 GAAAVASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPP-----------P 263
G S G P P R GGG + + P P RP +PP P
Sbjct: 208 GGPRQPSPGPTPPPFPGNRGTALGGGS-IRQSPLSSSSPFSNRPPLPPTPSRALDDKPPP 266
Query: 264 PPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGP 323
PPPP G +R H P P P A P PP PPP GP
Sbjct: 267 PPPPVG-NRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP-----PP--PPPPSRPGP 318
Query: 324 PRAL-------EPPYLPVR----SSDTPP-PGGERNG 348
P E P LP R SS TPP P R+G
Sbjct: 319 PPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSG 355
Score = 30.0 bits (66), Expect = 6.0
Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 40/137 (29%)
Query: 240 GEELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQ 299
G + P P+ P P+RP PPPPP R GF+ + + E+
Sbjct: 406 GVDSPRSGPRPPLP-PDRPSAGAPPPPPPSTSIR----------NGFQDSPCEDEWES-- 452
Query: 300 AHGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSV 359
R ++P PPPE Y V+++ + P RN ++ G
Sbjct: 453 ------RFYFHPISDLPPPEPY------------VQTTKSYPSKLARNESRSG------- 487
Query: 360 YRPNQNGRGLPDLVPDP 376
N+ RG P L P P
Sbjct: 488 --SNRRERGAPPLPPIP 502
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.8 bits (107), Expect = 1e-04
Identities = 42/153 (27%), Positives = 55/153 (35%), Gaps = 22/153 (14%)
Query: 244 PEYPPQGFYPAPERPYVPPPP-----PPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAA 298
P PP G P+ R VPPPP PP R + S P + P P P ++
Sbjct: 266 PPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPPPLPPSS 325
Query: 299 QAHGGDPRL--------GWYPPYAN-------PPPEAYGPPRALEPPYLPVRSSDTPPPG 343
+ PRL PP + PPP + PP + P P RS PPP
Sbjct: 326 SGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDP--PGRSGPLPPPP 383
Query: 344 GERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDP 376
R + P+++G P P P
Sbjct: 384 PVSRNGSTSRALPATPQLPSRSGVDSPRSGPRP 416
Score = 40.0 bits (92), Expect = 0.006
Identities = 45/157 (28%), Positives = 58/157 (36%), Gaps = 41/157 (26%)
Query: 253 PAPERPYVPPP-----------PPPPDGLDRRYSHSLYSEGTP----GFEQAYPDPGP-- 295
P P+R +PPP PPP R S ++ G+P G Q P P P
Sbjct: 162 PEPQRNRMPPPRPDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPPP 221
Query: 296 ----EAAQAHGGDPR---LGWYPPYANPPPEAYGPPRALE----PPYLPV-------RSS 337
GG R L P++N PP P RAL+ PP PV R +
Sbjct: 222 FPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREA 281
Query: 338 DTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVP 374
PPP Q + V S RP+ + + P P
Sbjct: 282 VPPPP------PQNNKPPVPSTPRPSASSQAPPPPPP 312
Score = 37.7 bits (86), Expect = 0.029
Identities = 49/157 (31%), Positives = 54/157 (34%), Gaps = 32/157 (20%)
Query: 215 GAAAVASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPP-----------P 263
G S G P P R GGG + + P P RP +PP P
Sbjct: 208 GGPRQPSPGPTPPPFPGNRGTALGGGS-IRQSPLSSSSPFSNRPPLPPTPSRALDDKPPP 266
Query: 264 PPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDPRLGWYPPYANPPPEAYGP 323
PPPP G +R H P P P A P PP PPP GP
Sbjct: 267 PPPPVG-NRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAP-----PP--PPPPSRPGP 318
Query: 324 PRAL-------EPPYLPVR----SSDTPP-PGGERNG 348
P E P LP R SS TPP P R+G
Sbjct: 319 PPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSG 355
Score = 30.0 bits (66), Expect = 6.0
Identities = 35/137 (25%), Positives = 51/137 (37%), Gaps = 40/137 (29%)
Query: 240 GEELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQ 299
G + P P+ P P+RP PPPPP R GF+ + + E+
Sbjct: 406 GVDSPRSGPRPPLP-PDRPSAGAPPPPPPSTSIR----------NGFQDSPCEDEWES-- 452
Query: 300 AHGGDPRLGWYPPYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSV 359
R ++P PPPE Y V+++ + P RN ++ G
Sbjct: 453 ------RFYFHPISDLPPPEPY------------VQTTKSYPSKLARNESRSG------- 487
Query: 360 YRPNQNGRGLPDLVPDP 376
N+ RG P L P P
Sbjct: 488 --SNRRERGAPPLPPIP 502
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 45.8 bits (107), Expect = 1e-04
Identities = 42/141 (29%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Query: 209 GGGVGAGAAAVASAGVIYPYQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPP--P 266
G G+G A ++ P P A + G P P Q P + P++P P P P
Sbjct: 742 GAGLGPQAPDSQASPAPAPQIPAAAPLKGPGPSSSPSLPHQA--PLGDSPHLPSPHPTRP 799
Query: 267 PDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGG----DPRLGWYPPYANPPPEAYG 322
P R S P +P P P+A G +LG PP +NP P A G
Sbjct: 800 PS---RPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPG 856
Query: 323 PPRALEPPYLPVRSSDTPPPG 343
PP+ P+R PP G
Sbjct: 857 PPQP------PLRPQSQPPEG 871
Score = 35.0 bits (79), Expect = 0.19
Identities = 90/348 (25%), Positives = 116/348 (33%), Gaps = 73/348 (20%)
Query: 54 LLNSGSEYVPAGPQRSESSSRVLLAGAPQAQQRRSHGSPRRRQAPSLPLPGRVGSDTVRG 113
LLN GS V ++ LL GAP Q P++ A LP VG +
Sbjct: 451 LLNQGSSIVIPAQHMLPGQNQFLLPGAPAVQ------LPQQLSA----LPANVGGQILAA 500
Query: 114 QARHPFG---FGQVPDNWREVAVGDSTGMARARTSVSQQRHGGSASSVSASAFASTYRQQ 170
A H G + N + +A S G A S + H SA+ + Q
Sbjct: 501 AAPHTGGQLIANPILTN-QNLAGPLSLGPVLAPHSGAHSAHILSAAPIQVG--------Q 551
Query: 171 PS---YPQQFPYPQAPFVSQYENYDPASRTYDQGFVYYRPAGGGVGAGAAAVASAGVIYP 227
P+ P P SQ PA+ T QG V P+ A A G++ P
Sbjct: 552 PALFQMPVSLAAGSLPTQSQPAPAGPAATTVLQG-VTLPPS-----AVAMLNTPDGLVQP 605
Query: 228 YQPRARYEEYGGGEELPEYPPQGFYPAPERPYVPPPPPPPDGLDRRYSHSLYSEGTPGFE 287
P A GE P Q PAP+ P P P GL + + TP +
Sbjct: 606 ATPAA-----ATGEAAPVLTVQ---PAPQAPPAVSTPLPL-GLQQPQAQQPPQAPTP--Q 654
Query: 288 QAYP----DPGPEAAQAHGGDPRLGWYPPYANP-------------PPEAYGPPRALEPP 330
A P P P A + + PP A P P E P + E P
Sbjct: 655 AAAPPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGP 714
Query: 331 YLPVRSS---DTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPD 375
+L V +S PPP + A P G GL PD
Sbjct: 715 HLSVPASVIVSAPPPAQDPAPA-----------TPVAKGAGLGPQAPD 751
Score = 33.1 bits (74), Expect = 0.71
Identities = 24/81 (29%), Positives = 28/81 (34%), Gaps = 22/81 (27%)
Query: 312 PYANPPPEAYGPPRALEPPYLPVRSSDTPPPGGERNGAQQ------------------GR 353
P PPP PP L+ P R PPP G+ NG R
Sbjct: 1329 PVHQPPP----PPATLKVAEPPPRPPPPPPPTGQMNGTVDHPPPAAPERKPLGTAPHCPR 1384
Query: 354 LSVGSVYRPNQNGRGLPDLVP 374
L + YR N G G P+ P
Sbjct: 1385 LPLRKTYRENVGGPGAPEGTP 1405
Score = 30.0 bits (66), Expect = 6.0
Identities = 12/23 (52%), Positives = 12/23 (52%)
Query: 247 PPQGFYPAPERPYVPPPPPPPDG 269
PP E P PPPPPPP G
Sbjct: 1335 PPPATLKVAEPPPRPPPPPPPTG 1357
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 45.8 bits (107), Expect = 1e-04
Identities = 45/156 (28%), Positives = 56/156 (35%), Gaps = 26/156 (16%)
Query: 240 GEELPEYPPQGFYPAPE---RPYVPPPPP-PPDGLDRRYSHSLYSEGTPGFEQAYPDPG- 294
G P PQG P P+ +P PPPPP P G + + PG Q P G
Sbjct: 49 GPPSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGD 106
Query: 295 -----------PEAAQAHGGDPRLGWYPPYA---NPPPEAYGPPRALEPPYLPVRSSDTP 340
P+ GG+ G PP PPP+ P+ PP P P
Sbjct: 107 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP----QGP 162
Query: 341 PPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDP 376
PP G+ N ++ R G P G P P P
Sbjct: 163 PPQGD-NKSRSSRSPPGKPQGPPPQGGNQPQGPPPP 197
Score = 42.7 bits (99), Expect = 9e-04
Identities = 50/165 (30%), Positives = 57/165 (34%), Gaps = 35/165 (21%)
Query: 240 GEELPEYPPQGFYPAPE---RPYVPPPP-----PPPDGLDRRYSHSLYSEGTPGFEQAYP 291
G P PQG P P+ +P PPPP PPP G ++ S S PG Q P
Sbjct: 131 GPPPPPGKPQG--PPPQGGNKPQGPPPPGKPQGPPPQGDNKSRS----SRSPPGKPQGPP 184
Query: 292 DPG--------PEAAQAHGGDPRLGWYPPYANPPPEAYGPP--------RALEPPYLPVR 335
G P + G P+ G P PP + GPP A PP P
Sbjct: 185 PQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKP-- 242
Query: 336 SSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDPNYVQ 380
PP GG N Q G P G P P P Q
Sbjct: 243 -QGPPPQGG--NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQ 284
Score = 42.4 bits (98), Expect = 0.001
Identities = 45/170 (26%), Positives = 57/170 (33%), Gaps = 27/170 (15%)
Query: 227 PYQPRARYEEYGGGEELPEYPPQGFYPAPERPYVP--PPPPP--PDGLDRRYSHSLYSEG 282
P P + + P PQG P P+ P PPPPP P G + +
Sbjct: 159 PQGPPPQGDNKSRSSRSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 216
Query: 283 TPGFEQAYPDPG-------------PEAAQAHGGDPRLGWYPPYA---NPPPEAYGPPRA 326
PG Q P G P+ GG+ G PP PPP+ P+
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 276
Query: 327 LEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDP 376
PP P PP GG + ++ R G P G P P P
Sbjct: 277 PPPPGKP---QGPPPQGGSK--SRSSRSPPGKPQGPPPQGGNQPQGPPPP 321
Score = 42.4 bits (98), Expect = 0.001
Identities = 45/170 (26%), Positives = 58/170 (34%), Gaps = 27/170 (15%)
Query: 227 PYQPRARYEEYGGGEELPEYPPQGFYPAPE---RPYVPPPPP-PPDGLDRRYSHSLYSEG 282
P P + + P PQG P P+ +P PPPPP P G + +
Sbjct: 221 PQGPPPQGDNKSQSARSPPGKPQG--PPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 278
Query: 283 TPGFEQAYPDPG-------------PEAAQAHGGDPRLGWYPPYA---NPPPEAYGPPRA 326
PG Q P G P+ GG+ G PP PPP+ P+
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 338
Query: 327 LEPPYLPVRSSDTPPPGGERNGAQQGRLSVGSVYRPNQNGRGLPDLVPDP 376
PP P PP GG + ++ R G P Q P P P
Sbjct: 339 PPPPGKP---QGPPPQGGSK--SRSARSPPGKPQGPPQQEGNNPQGPPPP 383
Score = 38.1 bits (87), Expect = 0.022
Identities = 32/106 (30%), Positives = 41/106 (38%), Gaps = 12/106 (11%)
Query: 247 PPQGFYPAPERPYVPPPPP-PPDGLDRRYSHSLYSEGTPGFEQAYPDPGPEAAQAHGGDP 305
PPQG +P PPPPP P G + + PG Q P G +++ P
Sbjct: 308 PPQG----GNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPP 363
Query: 306 RLGWYPPYAN------PPPEAYGPPRALE-PPYLPVRSSDTPPPGG 344
PP PPP A G P+ + PP + PP GG
Sbjct: 364 GKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGG 409
Score = 29.6 bits (65), Expect = 7.9
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 15/91 (16%)
Query: 295 PEAAQAHGGDPRLGWYPPYANPPPEAYGPP-----RALEPPYLPVRSSDTPPPGGER--- 346
P+ A GG+ G PP +PP + GPP + PP P + PP GG +
Sbjct: 36 PQGAPPQGGNKPQG--PP--SPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 91
Query: 347 ---NGAQQGRLSVGSVYRPNQNGRGLPDLVP 374
G QG G R ++ G P P
Sbjct: 92 PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPP 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.134 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,614,589
Number of Sequences: 37866
Number of extensions: 2020810
Number of successful extensions: 18218
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 758
Number of HSP's that attempted gapping in prelim test: 11173
Number of HSP's gapped (non-prelim): 4512
length of query: 574
length of database: 18,247,518
effective HSP length: 108
effective length of query: 466
effective length of database: 14,157,990
effective search space: 6597623340
effective search space used: 6597623340
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.