Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PWWP2A Sequence: fasta or formatted (560aa) NCBI GI: 153791982
Description:

PWWP domain containing 2A isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {755aa} PWWP domain containing 2A isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8         55           4
 C cysteine            1.1          6           1
 D aspartate           3.6         20           2
 E glutamate           8.4         47           2
 F phenylalanine       1.8         10           1
 G glycine             5.5         31           2
 H histidine           2.1         12           1
 I isoleucine          2.3         13           2
 K lysine              8.8         49           2
 L leucine             6.8         38           2
 M methionine          1.6          9           1
 N asparagine          3.4         19           1
 P proline            12.3         69           7
 Q glutamine           4.6         26           2
 R arginine            5.9         33           2
 S serine              8.6         48           2
 T threonine           5.2         29           2
 V valine              6.6         37           2
 W tryptophan          0.4          2           1
 Y tyrosine            1.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PWWP domain containing 2A isoform a 
PWWP2A                0.919   PWWP domain containing 2A isoform b 
PWWP2B                0.103   PWWP domain containing 2 isoform 1 
PWWP2B                0.103   PWWP domain containing 2 isoform 2 
TTN                   0.034   titin isoform N2-A 
SAMD1                 0.034   sterile alpha motif domain containing 1 
PRB1                  0.032   proline-rich protein BstNI subfamily 1 isoform 1 pre...
SYN1                  0.031   synapsin I isoform Ia 
SYN1                  0.031   synapsin I isoform Ib 
PRR12                 0.031   proline rich 12 
PRB3                  0.029   proline-rich protein BstNI subfamily 3 precursor [H...
FMNL1                 0.029   formin-like 1 
PRB1                  0.029   proline-rich protein BstNI subfamily 1 isoform 2 pre...
NACA                  0.028   nascent polypeptide-associated complex alpha subuni...
MLL2                  0.028   myeloid/lymphoid or mixed-lineage leukemia 2 
FBLIM1                0.027   filamin-binding LIM protein-1 isoform b 
FBLIM1                0.027   filamin-binding LIM protein-1 isoform a 
PRB2                  0.027   proline-rich protein BstNI subfamily 2 
FLJ22184              0.026   PREDICTED: hypothetical protein LOC80164 
TNK2                  0.026   tyrosine kinase, non-receptor, 2 isoform 1 
NCOR2                 0.026   nuclear receptor co-repressor 2 isoform 2 
ZFHX4                 0.026   zinc finger homeodomain 4 
PRB4                  0.026   proline-rich protein BstNI subfamily 4 precursor [Ho...
FLJ22184              0.026   PREDICTED: hypothetical protein FLJ22184 
TNK2                  0.026   tyrosine kinase, non-receptor, 2 isoform 2 
FMN1                  0.026   formin 1 
WAS                   0.026   Wiskott-Aldrich syndrome protein 
MLL4                  0.026   myeloid/lymphoid or mixed-lineage leukemia 4 
C6orf132              0.025   PREDICTED: chromosome 6 open reading frame 132 [Hom...
C6orf132              0.025   PREDICTED: chromosome 6 open reading frame 132 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press