Guide to the Human Genome
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Name: BCL7A Sequence: fasta or formatted (210aa) NCBI GI: 67190736
Description:

B-cell CLL/lymphoma 7A isoform b

Referenced in:

B cells

Other entries for this name:
alt prot [231aa] B-cell CLL/lymphoma 7A isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         17           2
 C cysteine            0.5          1           1
 D aspartate           8.6         18           2
 E glutamate          10.0         21           2
 F phenylalanine       0.0          0           0
 G glycine             5.2         11           1
 H histidine           1.4          3           1
 I isoleucine          2.9          6           1
 K lysine             10.5         22           3
 L leucine             1.9          4           1
 M methionine          4.3          9           2
 N asparagine          5.2         11           1
 P proline             6.2         13           2
 Q glutamine           4.3          9           2
 R arginine            3.8          8           1
 S serine             15.2         32           3
 T threonine           3.8          8           2
 V valine              6.2         13           1
 W tryptophan          1.4          3           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B-cell CLL/lymphoma 7A isoform b 
BCL7A                 0.970   B-cell CLL/lymphoma 7A isoform a 
BCL7B                 0.330   B-cell CLL/lymphoma 7B 
BCL7C                 0.249   B-cell CLL/lymphoma 7C 
DSPP                  0.084   dentin sialophosphoprotein preproprotein 
ACRC                  0.048   ACRC protein 
ARID4B                0.048   AT rich interactive domain 4B isoform 2 
ARID4B                0.048   AT rich interactive domain 4B isoform 1 
MLLT3                 0.046   myeloid/lymphoid or mixed-lineage leukemia (trithor...
DMP1                  0.043   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.043   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
FAM133A               0.043   hypothetical protein LOC286499 
SMTNL1                0.038   smoothelin-like 1 
TNRC18                0.038   trinucleotide repeat containing 18 
MYST3                 0.036   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.036   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.036   MYST histone acetyltransferase (monocytic leukemia)...
NEFH                  0.033   neurofilament, heavy polypeptide 200kDa 
HIRIP3                0.033   HIRA interacting protein 3 
RP1L1                 0.033   retinitis pigmentosa 1-like 1 
AP3B1                 0.030   adaptor-related protein complex 3, beta 1 subunit [H...
CYLC2                 0.030   cylicin 2 
KIAA1618              0.030   hypothetical protein LOC57714 
CCAR1                 0.030   cell-cycle and apoptosis regulatory protein 1 
BOD1L                 0.030   biorientation of chromosomes in cell division 1-like...
GTF2F1                0.030   general transcription factor IIF, polypeptide 1, 74...
TRDN                  0.030   triadin 
MDN1                  0.030   MDN1, midasin homolog 
CUX1                  0.028   cut-like homeobox 1 isoform a 
TRIM44                0.028   DIPB protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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