Guide to the Human Genome
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Name: BCL7A Sequence: fasta or formatted (231aa) NCBI GI: 10337613
Description:

B-cell CLL/lymphoma 7A isoform a

Referenced in:

B cells

Other entries for this name:
alt prot [210aa] B-cell CLL/lymphoma 7A isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         17           2
 C cysteine            0.4          1           1
 D aspartate           7.8         18           2
 E glutamate           9.5         22           2
 F phenylalanine       0.0          0           0
 G glycine             6.5         15           1
 H histidine           1.3          3           1
 I isoleucine          3.5          8           1
 K lysine              9.5         22           3
 L leucine             2.2          5           1
 M methionine          3.9          9           2
 N asparagine          4.8         11           1
 P proline             6.5         15           2
 Q glutamine           4.8         11           2
 R arginine            5.2         12           1
 S serine             15.6         36           3
 T threonine           3.5          8           2
 V valine              6.1         14           1
 W tryptophan          1.3          3           1
 Y tyrosine            0.4          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B-cell CLL/lymphoma 7A isoform a 
BCL7A                 0.880   B-cell CLL/lymphoma 7A isoform b 
BCL7B                 0.288   B-cell CLL/lymphoma 7B 
BCL7C                 0.221   B-cell CLL/lymphoma 7C 
DSPP                  0.071   dentin sialophosphoprotein preproprotein 
ACRC                  0.048   ACRC protein 
SMTNL1                0.044   smoothelin-like 1 
DMP1                  0.041   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.041   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
ARID4B                0.039   AT rich interactive domain 4B isoform 2 
ARID4B                0.039   AT rich interactive domain 4B isoform 1 
TGOLN2                0.032   trans-golgi network protein 2 
SRRM2                 0.032   splicing coactivator subunit SRm300 
AFF1                  0.030   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
AP3B1                 0.028   adaptor-related protein complex 3, beta 1 subunit [H...
NEFH                  0.028   neurofilament, heavy polypeptide 200kDa 
KIAA1618              0.028   hypothetical protein LOC57714 
TNRC18                0.028   trinucleotide repeat containing 18 
PNMAL2                0.028   PNMA-like 2 
FAM133A               0.028   hypothetical protein LOC286499 
TANC1                 0.028   tetratricopeptide repeat, ankyrin repeat and coiled...
CCAR1                 0.028   cell-cycle and apoptosis regulatory protein 1 
HELZ                  0.028   helicase with zinc finger domain 
MAP1B                 0.028   microtubule-associated protein 1B 
FSCB                  0.028   fibrous sheath CABYR binding protein 
CUX1                  0.025   cut-like homeobox 1 isoform a 
CTDP1                 0.025   CTD (carboxy-terminal domain, RNA polymerase II, pol...
CTDP1                 0.025   CTD (carboxy-terminal domain, RNA polymerase II, pol...
TRIM44                0.025   DIPB protein 
GTF2F1                0.025   general transcription factor IIF, polypeptide 1, 74...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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