TRIM44 13008

Name: TRIM44	Sequence: fasta or formatted (344aa)		NCBI GI: 21361639
Description: DIPB protein		Referenced in: Tripartite Motif Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.6 33 2 C cysteine 2.9 10 1 D aspartate 7.0 24 1 E glutamate 23.5 81 3 F phenylalanine 2.3 8 1 G glycine 5.8 20 2 H histidine 3.5 12 2 I isoleucine 2.9 10 1 K lysine 4.9 17 2 L leucine 5.2 18 1 M methionine 2.9 10 1 N asparagine 0.6 2 1 P proline 3.2 11 2 Q glutamine 5.5 19 2 R arginine 3.5 12 2 S serine 7.8 27 2 T threonine 3.5 12 1 V valine 4.1 14 1 W tryptophan 0.3 1 1 Y tyrosine 0.9 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 DIPB protein RPGR 0.086 retinitis pigmentosa GTPase regulator isoform C [Hom... MYT1 0.075 myelin transcription factor 1 CDC2L2 0.068 cell division cycle 2-like 2 isoform 4 CDC2L2 0.068 cell division cycle 2-like 2 isoform 1 PELP1 0.068 proline, glutamic acid and leucine rich protein 1 [... CDC2L1 0.068 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.068 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.068 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.068 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.068 cell division cycle 2-like 1 (PITSLRE proteins) isof... CDC2L1 0.068 cell division cycle 2-like 1 (PITSLRE proteins) isof... NEFM 0.068 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.068 neurofilament, medium polypeptide 150kDa isoform 2 ... MYT1L 0.066 myelin transcription factor 1-like YTHDC1 0.065 splicing factor YT521-B isoform 1 BAT2D1 0.063 HBxAg transactivated protein 2 ANP32B 0.060 acidic (leucine-rich) nuclear phosphoprotein 32 famil... RP1L1 0.060 retinitis pigmentosa 1-like 1 EIF5B 0.060 eukaryotic translation initiation factor 5B WDR87 0.060 NYD-SP11 protein LOC647020 0.059 PREDICTED: similar to acidic (leucine-rich) nuclear... LOC647020 0.059 PREDICTED: similar to acidic (leucine-rich) nuclear... ZEB1 0.059 zinc finger E-box binding homeobox 1 isoform a [Hom... ZEB1 0.059 zinc finger E-box binding homeobox 1 isoform b [Hom... ZC3H13 0.059 zinc finger CCCH-type containing 13 AP3B1 0.059 adaptor-related protein complex 3, beta 1 subunit [H... SFRS12 0.059 splicing factor, arginine/serine-rich 12 isoform a ... SFRS12 0.059 splicing factor, arginine/serine-rich 12 isoform b [... YTHDC1 0.059 splicing factor YT521-B isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.