Guide to the Human Genome
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Name: BCL7B Sequence: fasta or formatted (202aa) NCBI GI: 20336473
Description:

B-cell CLL/lymphoma 7B

Referenced in:

B cells

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         12           2
 C cysteine            0.5          1           1
 D aspartate           6.9         14           2
 E glutamate          10.9         22           4
 F phenylalanine       2.5          5           1
 G glycine             2.5          5           1
 H histidine           0.5          1           1
 I isoleucine          2.0          4           1
 K lysine              7.4         15           2
 L leucine             5.9         12           3
 M methionine          1.0          2           1
 N asparagine          3.0          6           1
 P proline             8.9         18           2
 Q glutamine           5.0         10           2
 R arginine            4.5          9           1
 S serine             16.3         33           2
 T threonine           6.4         13           1
 V valine              7.9         16           2
 W tryptophan          1.5          3           1
 Y tyrosine            0.5          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B-cell CLL/lymphoma 7B 
BCL7C                 0.393   B-cell CLL/lymphoma 7C 
BCL7A                 0.348   B-cell CLL/lymphoma 7A isoform b 
BCL7A                 0.334   B-cell CLL/lymphoma 7A isoform a 
TNRC18                0.048   trinucleotide repeat containing 18 
SETD1A                0.040   SET domain containing 1A 
HIVEP3                0.037   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.037   human immunodeficiency virus type I enhancer bindin...
MUC17                 0.037   mucin 17 
TCERG1                0.037   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.037   transcription elongation regulator 1 isoform 1 [Homo...
TOX                   0.035   thymus high mobility group box protein TOX 
ACRC                  0.035   ACRC protein 
DSPP                  0.032   dentin sialophosphoprotein preproprotein 
LIG1                  0.032   DNA ligase I 
TRDN                  0.032   triadin 
C1orf113              0.029   SH3 domain-containing protein C1orf113 isoform 1 [H...
C1orf113              0.029   SH3 domain-containing protein C1orf113 isoform 2 [H...
BRD4                  0.029   bromodomain-containing protein 4 isoform long 
NCOR2                 0.027   nuclear receptor co-repressor 2 isoform 2 
TCHHL1                0.027   trichohyalin-like 1 
HOXA3                 0.027   homeobox A3 isoform a 
HOXA3                 0.027   homeobox A3 isoform a 
BASP1                 0.027   brain abundant, membrane attached signal protein 1 [...
MLLT3                 0.027   myeloid/lymphoid or mixed-lineage leukemia (trithor...
NT5C1B                0.027   5' nucleotidase, cytosolic IB isoform 2 
EIF4G1                0.027   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.027   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.027   eukaryotic translation initiation factor 4 gamma, 1 ...
EIF4G1                0.027   eukaryotic translation initiation factor 4 gamma, 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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