Guide to the Human Genome
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Name: TNS4 Sequence: fasta or formatted (715aa) NCBI GI: 157738639
Description:

tensin 4

Referenced in:

Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         50           2
 C cysteine            2.7         19           1
 D aspartate           3.6         26           1
 E glutamate           5.3         38           2
 F phenylalanine       3.2         23           2
 G glycine             6.9         49           2
 H histidine           2.7         19           1
 I isoleucine          3.4         24           1
 K lysine              3.5         25           2
 L leucine             9.1         65           3
 M methionine          2.5         18           1
 N asparagine          2.0         14           1
 P proline            10.6         76           2
 Q glutamine           5.5         39           2
 R arginine            5.3         38           2
 S serine             14.3        102           4
 T threonine           5.6         40           2
 V valine              4.8         34           2
 W tryptophan          0.6          4           1
 Y tyrosine            1.7         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tensin 4 
TNS3                  0.207   tensin 3 
TNS1                  0.205   tensin 
TENC1                 0.194   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.194   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.194   tensin like C1 domain containing phosphatase isoform...
ATN1                  0.019   atrophin-1 
ATN1                  0.019   atrophin-1 
LOC100134663          0.018   PREDICTED: hypothetical protein, partial 
ZC3H18                0.018   zinc finger CCCH-type containing 18 
MUC17                 0.016   mucin 17 
TNRC18                0.015   trinucleotide repeat containing 18 
SRRM2                 0.015   splicing coactivator subunit SRm300 
FRMPD4                0.015   FERM and PDZ domain containing 4 
PRR12                 0.014   proline rich 12 
ATXN2                 0.013   ataxin 2 
BCLAF1                0.013   BCL2-associated transcription factor 1 isoform 3 [H...
CSK                   0.013   c-src tyrosine kinase 
CSK                   0.013   c-src tyrosine kinase 
FLJ22184              0.013   PREDICTED: hypothetical protein FLJ22184 
MED1                  0.013   mediator complex subunit 1 
MEF2D                 0.013   myocyte enhancer factor 2D 
RIN1                  0.013   ras inhibitor RIN1 
CISH                  0.013   cytokine-inducible SH2-containing protein isoform 1...
CRTC3                 0.013   transducer of regulated CREB protein 3 isoform b [H...
CRTC3                 0.013   transducer of regulated CREB protein 3 isoform a [H...
ARID1A                0.012   AT rich interactive domain 1A isoform a 
MBD6                  0.012   methyl-CpG binding domain protein 6 
SLA2                  0.012   Src-like-adaptor 2 isoform a 
ARHGAP17              0.011   nadrin isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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