Guide to the Human Genome
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Name: TNS3 Sequence: fasta or formatted (1445aa) NCBI GI: 65288071
Description:

tensin 3

Referenced in:

Thyroid and Thyroid Hormone Receptor
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1        102           2
 C cysteine            1.5         21           1
 D aspartate           5.5         79           2
 E glutamate           4.9         71           2
 F phenylalanine       3.6         52           2
 G glycine             8.4        121           3
 H histidine           3.2         46           2
 I isoleucine          3.3         47           2
 K lysine              4.9         71           2
 L leucine             8.9        128           2
 M methionine          1.7         25           1
 N asparagine          2.8         41           1
 P proline             9.4        136           3
 Q glutamine           4.8         69           3
 R arginine            4.4         64           2
 S serine             11.8        170           4
 T threonine           4.9         71           2
 V valine              6.2         90           3
 W tryptophan          0.6          9           1
 Y tyrosine            2.2         32           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tensin 3 
TNS1                  0.229   tensin 
TENC1                 0.150   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.150   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.150   tensin like C1 domain containing phosphatase isoform...
TNS4                  0.101   tensin 4 
PTEN                  0.041   phosphatase and tensin homolog 
GAK                   0.038   cyclin G associated kinase 
TPTE                  0.033   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.033   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.033   transmembrane phosphatase with tensin homology isof...
DNAJC6                0.033   DnaJ (Hsp40) homolog, subfamily C, member 6 
TPTE2                 0.032   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.032   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.032   TPTE and PTEN homologous inositol lipid phosphatase...
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.012   PREDICTED: hypothetical protein FLJ22184 
FLJ22184              0.010   PREDICTED: hypothetical protein LOC80164 
MUC16                 0.010   mucin 16 
MAGEE1                0.009   melanoma antigen family E, 1 
ARHGAP17              0.009   nadrin isoform 1 
MUC12                 0.009   PREDICTED: mucin 12 
ZNF469                0.009   zinc finger protein 469 
SRRM2                 0.009   splicing coactivator subunit SRm300 
MUC12                 0.008   PREDICTED: mucin 12, cell surface associated 
MUC17                 0.008   mucin 17 
NACA                  0.008   nascent polypeptide-associated complex alpha subuni...
ARHGAP17              0.008   nadrin isoform 2 
MICALL1               0.008   molecule interacting with Rab13 
RIN1                  0.008   ras inhibitor RIN1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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