Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: TPTE Sequence: fasta or formatted (513aa) NCBI GI: 40549435
Description:

transmembrane phosphatase with tensin homology isoform gamma

Referenced in:

Inositol Pathways
Sodium Channels

Other entries for this name:
alt prot [551aa] transmembrane phosphatase with tensin homology isoform alpha
alt prot [533aa] transmembrane phosphatase with tensin homology isoform beta
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         21           1
 C cysteine            1.2          6           1
 D aspartate           6.4         33           2
 E glutamate           5.3         27           2
 F phenylalanine       7.0         36           2
 G glycine             3.1         16           2
 H histidine           3.1         16           1
 I isoleucine          8.6         44           2
 K lysine              6.2         32           2
 L leucine            11.1         57           3
 M methionine          1.8          9           1
 N asparagine          4.1         21           2
 P proline             3.7         19           2
 Q glutamine           2.7         14           2
 R arginine            7.0         36           3
 S serine              6.6         34           2
 T threonine           4.9         25           2
 V valine              7.6         39           2
 W tryptophan          0.8          4           1
 Y tyrosine            4.7         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane phosphatase with tensin homology isofo... 
TPTE                  0.988   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.981   transmembrane phosphatase with tensin homology isof...
TPTE2                 0.810   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.687   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.593   TPTE and PTEN homologous inositol lipid phosphatase...
PTEN                  0.180   phosphatase and tensin homolog 
TNS1                  0.099   tensin 
TNS3                  0.097   tensin 3 
GAK                   0.094   cyclin G associated kinase 
TENC1                 0.083   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.083   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.083   tensin like C1 domain containing phosphatase isoform...
LOC100293174          0.078   PREDICTED: similar to transmembrane phosphoinositid...
DNAJC6                0.072   DnaJ (Hsp40) homolog, subfamily C, member 6 
HVCN1                 0.048   hydrogen voltage-gated channel 1 
HVCN1                 0.048   hydrogen voltage-gated channel 1 
SCN8A                 0.021   sodium channel, voltage gated, type VIII, alpha [Homo...
SLC9A10               0.020   sperm-specific sodium proton exchanger 
SCN4A                 0.018   voltage-gated sodium channel type 4 alpha 
DUSP11                0.017   dual specificity phosphatase 11 
CATSPER2              0.016   sperm-associated cation channel 2 isoform 2 
CATSPER2              0.016   sperm-associated cation channel 2 isoform 1 
CACNA1H               0.016   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1H               0.016   calcium channel, voltage-dependent, T type, alpha 1H...
CACNA1I               0.016   calcium channel, voltage-dependent, T type, alpha 1I...
CACNA1I               0.016   calcium channel, voltage-dependent, T type, alpha 1I...
SCN3A                 0.014   sodium channel, voltage-gated, type III, alpha isof...
SCN3A                 0.014   sodium channel, voltage-gated, type III, alpha isof...
SCN3A                 0.014   sodium channel, voltage-gated, type III, alpha isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press