Guide to the Human Genome
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Name: PTEN Sequence: fasta or formatted (403aa) NCBI GI: 73765544
Description:

phosphatase and tensin homolog

Referenced in:

Inositol Pathways
PDZ Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         17           2
 C cysteine            2.5         10           1
 D aspartate           8.2         33           2
 E glutamate           7.2         29           2
 F phenylalanine       6.2         25           2
 G glycine             3.7         15           2
 H histidine           3.2         13           1
 I isoleucine          5.0         20           2
 K lysine              8.4         34           2
 L leucine             6.7         27           2
 M methionine          2.2          9           2
 N asparagine          5.7         23           2
 P proline             5.7         23           2
 Q glutamine           3.2         13           1
 R arginine            5.0         20           2
 S serine              5.5         22           3
 T threonine           5.2         21           2
 V valine              6.0         24           2
 W tryptophan          0.5          2           1
 Y tyrosine            5.7         23           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phosphatase and tensin homolog 
TPTE2                 0.239   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.239   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.239   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE                  0.221   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.221   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.221   transmembrane phosphatase with tensin homology isof...
TNS3                  0.146   tensin 3 
TNS1                  0.143   tensin 
TENC1                 0.127   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.127   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.127   tensin like C1 domain containing phosphatase isoform...
GAK                   0.111   cyclin G associated kinase 
DNAJC6                0.102   DnaJ (Hsp40) homolog, subfamily C, member 6 
LOC100293174          0.034   PREDICTED: similar to transmembrane phosphoinositid...
PTP4A1                0.023   protein tyrosine phosphatase type IVA, member 1 [Homo...
PTP4A2                0.022   protein tyrosine phosphatase type IVA, member 2 isof...
CDC14B                0.021   CDC14 homolog B isoform 3 
CDC14B                0.021   CDC14 homolog B isoform 1 
CDC14B                0.021   CDC14 homolog B isoform 2 
CDC14A                0.021   CDC14 homolog A isoform 3 
CDC14A                0.021   CDC14 homolog A isoform 1 
CDC14A                0.021   CDC14 homolog A isoform 2 
PTP4A3                0.021   protein tyrosine phosphatase type IVA, member 3 isof...
PTPRH                 0.017   protein tyrosine phosphatase, receptor type, H isof...
PTPRH                 0.017   protein tyrosine phosphatase, receptor type, H isof...
PTPRF                 0.015   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.015   protein tyrosine phosphatase, receptor type, F isof...
PTPRA                 0.015   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.015   protein tyrosine phosphatase, receptor type, A isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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