Guide to the Human Genome
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Name: GAK Sequence: fasta or formatted (1311aa) NCBI GI: 157384971
Description:

cyclin G associated kinase

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7        114           3
 C cysteine            2.0         26           1
 D aspartate           5.3         69           1
 E glutamate           7.0         92           3
 F phenylalanine       3.9         51           1
 G glycine             7.3         96           2
 H histidine           2.2         29           1
 I isoleucine          3.6         47           2
 K lysine              4.6         60           2
 L leucine             8.9        117           3
 M methionine          1.9         25           1
 N asparagine          3.1         40           2
 P proline             9.1        119           4
 Q glutamine           4.5         59           2
 R arginine            5.3         69           2
 S serine              9.3        122           3
 T threonine           4.2         55           2
 V valine              5.6         73           2
 W tryptophan          1.2         16           1
 Y tyrosine            2.4         32           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin G associated kinase 
DNAJC6                0.283   DnaJ (Hsp40) homolog, subfamily C, member 6 
AAK1                  0.063   AP2 associated kinase 1 
BMP2K                 0.059   BMP-2 inducible kinase isoform a 
BMP2K                 0.059   BMP-2 inducible kinase isoform b 
TNS1                  0.045   tensin 
TNS3                  0.042   tensin 3 
NEK1                  0.037   NIMA-related kinase 1 
TPTE2                 0.037   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.037   TPTE and PTEN homologous inositol lipid phosphatase...
TPTE2                 0.037   TPTE and PTEN homologous inositol lipid phosphatase...
TENC1                 0.036   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.036   tensin like C1 domain containing phosphatase isoform...
TENC1                 0.036   tensin like C1 domain containing phosphatase isoform...
STK16                 0.036   serine/threonine kinase 16 
TPTE                  0.036   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.036   transmembrane phosphatase with tensin homology isofo...
TPTE                  0.036   transmembrane phosphatase with tensin homology isof...
PTEN                  0.034   phosphatase and tensin homolog 
NEK3                  0.033   NIMA-related kinase 3 isoform b 
NEK3                  0.033   NIMA-related kinase 3 isoform a 
NEK3                  0.033   NIMA-related kinase 3 isoform a 
NEK4                  0.032   NIMA-related kinase 4 
NEK5                  0.029   NIMA-related kinase 5 
STK36                 0.029   serine/threonine kinase 36 
SIK1                  0.028   SNF1-like kinase 
MARK4                 0.027   MAP/microtubule affinity-regulating kinase 4 
NEK8                  0.025   NIMA-related kinase 8 
MGC42105              0.025   serine/threonine-protein kinase NIM1 
MAPK15                0.025   mitogen-activated protein kinase 15 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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