LRRIQ1 2448

Name: LRRIQ1	Sequence: fasta or formatted (1722aa)		NCBI GI: 120953300
Description: leucine-rich repeats and IQ motif containing 1 isoform 1		Referenced in: Leucine-rich Repeat Family Additional Interaction Domain Families
Other entries for this name: alt prot [1336aa] leucine-rich repeats and IQ motif containing 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 70 2 C cysteine 2.1 37 2 D aspartate 5.2 90 4 E glutamate 11.3 195 4 F phenylalanine 2.5 43 2 G glycine 3.0 52 2 H histidine 2.6 44 2 I isoleucine 6.3 108 2 K lysine 10.3 177 3 L leucine 10.8 186 3 M methionine 1.5 25 1 N asparagine 6.5 112 2 P proline 2.8 49 1 Q glutamine 5.5 95 2 R arginine 4.3 74 2 S serine 8.8 151 3 T threonine 4.9 84 2 V valine 3.9 68 2 W tryptophan 1.6 27 1 Y tyrosine 2.0 35 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine-rich repeats and IQ motif containing 1 isof... LRRIQ1 0.774 leucine-rich repeats and IQ motif containing 1 isof... LOC727832 0.026 golgi autoantigen, golgin subfamily a-like TCHH 0.026 trichohyalin LOC283685 0.025 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.024 PREDICTED: golgi autoantigen, golgin subfamily a-li... WDR87 0.022 NYD-SP11 protein LOC440243 0.021 PREDICTED: Putative golgin subfamily A member 6-lik... LOC283767 0.020 golgi autoantigen, golgin subfamily a-like CALD1 0.019 caldesmon 1 isoform 1 LOC645202 0.019 PREDICTED: hypothetical protein LOC645202 LOC400352 0.019 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.019 PREDICTED: similar to Putative golgin subfamily A m... KIF20B 0.019 M-phase phosphoprotein 1 CENPE 0.018 centromere protein E MYH10 0.018 myosin, heavy polypeptide 10, non-muscle CCDC88A 0.018 coiled-coil domain containing 88A isoform 1 GCC2 0.018 GRIP and coiled-coil domain-containing 2 GIGYF2 0.018 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.018 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.018 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.018 GRB10 interacting GYF protein 2 isoform b LOC100133758 0.018 PREDICTED: hypothetical protein, partial CCDC88A 0.017 coiled-coil domain containing 88A isoform 2 GOLGA4 0.017 golgi autoantigen, golgin subfamily a, 4 MYH11 0.017 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.017 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.017 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.017 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH9 0.017 myosin, heavy polypeptide 9, non-muscle Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.