LRRIQ1 2444

Name: LRRIQ1	Sequence: fasta or formatted (1336aa)		NCBI GI: 120953243
Description: leucine-rich repeats and IQ motif containing 1 isoform 2		Referenced in: Leucine-rich Repeat Family Additional Interaction Domain Families
Other entries for this name: alt prot [1722aa] leucine-rich repeats and IQ motif containing 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.6 48 2 C cysteine 2.6 35 2 D aspartate 5.4 72 4 E glutamate 12.1 162 4 F phenylalanine 2.2 30 2 G glycine 2.9 39 1 H histidine 2.5 34 2 I isoleucine 6.7 89 2 K lysine 10.3 137 3 L leucine 11.0 147 2 M methionine 1.4 19 1 N asparagine 6.6 88 2 P proline 2.6 35 1 Q glutamine 5.8 78 2 R arginine 3.7 50 2 S serine 8.5 113 2 T threonine 4.5 60 2 V valine 4.0 54 2 W tryptophan 1.3 17 1 Y tyrosine 2.2 29 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine-rich repeats and IQ motif containing 1 isof... LRRIQ1 0.999 leucine-rich repeats and IQ motif containing 1 isof... LOC727832 0.033 golgi autoantigen, golgin subfamily a-like TCHH 0.033 trichohyalin LOC283685 0.032 PREDICTED: golgi autoantigen, golgin subfamily a-li... LOC283685 0.031 PREDICTED: golgi autoantigen, golgin subfamily a-li... WDR87 0.028 NYD-SP11 protein LOC440243 0.027 PREDICTED: Putative golgin subfamily A member 6-lik... LOC283767 0.025 golgi autoantigen, golgin subfamily a-like CALD1 0.025 caldesmon 1 isoform 1 LOC645202 0.024 PREDICTED: hypothetical protein LOC645202 LOC400352 0.024 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.024 PREDICTED: similar to Putative golgin subfamily A m... KIF20B 0.024 M-phase phosphoprotein 1 CENPE 0.024 centromere protein E MYH10 0.023 myosin, heavy polypeptide 10, non-muscle CCDC88A 0.023 coiled-coil domain containing 88A isoform 1 GCC2 0.023 GRIP and coiled-coil domain-containing 2 GIGYF2 0.023 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.023 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.023 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.023 GRB10 interacting GYF protein 2 isoform b LOC100133758 0.023 PREDICTED: hypothetical protein, partial CCDC88A 0.022 coiled-coil domain containing 88A isoform 2 GOLGA4 0.022 golgi autoantigen, golgin subfamily a, 4 MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.022 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH9 0.022 myosin, heavy polypeptide 9, non-muscle Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.