Guide to the Human Genome
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Name: PPP1R7 Sequence: fasta or formatted (360aa) NCBI GI: 4506013
Description:

protein phosphatase 1, regulatory subunit 7

Referenced in:

Leucine-rich Repeat Family
Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.3         12           2
 C cysteine            0.6          2           1
 D aspartate           6.1         22           1
 E glutamate          12.8         46           3
 F phenylalanine       1.9          7           1
 G glycine             4.4         16           1
 H histidine           1.7          6           1
 I isoleucine          6.9         25           1
 K lysine              6.9         25           2
 L leucine            16.1         58           2
 M methionine          2.5          9           2
 N asparagine          8.3         30           3
 P proline             1.4          5           1
 Q glutamine           4.7         17           3
 R arginine            5.8         21           2
 S serine              6.1         22           2
 T threonine           3.9         14           1
 V valine              4.4         16           1
 W tryptophan          0.6          2           1
 Y tyrosine            1.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1, regulatory subunit 7 
LRRC49                0.135   leucine rich repeat containing 49 
LRGUK                 0.103   leucine-rich repeats and guanylate kinase domain con...
LRRC48                0.100   leucine rich repeat containing 48 isoform b 
LRRC48                0.100   leucine rich repeat containing 48 isoform b 
LRRC48                0.100   leucine rich repeat containing 48 isoform a 
LRRC48                0.100   leucine rich repeat containing 48 isoform a 
LRRC50                0.094   leucine rich repeat containing 50 
LRRC23                0.092   leucine rich repeat containing 23 isoform a 
LRRC23                0.092   leucine rich repeat containing 23 isoform a 
LRRCC1                0.091   sodium channel associated protein 2 isoform a [Homo...
CEP97                 0.086   centrosomal protein 97kDa 
CEP110                0.085   centrosomal protein 110kDa 
LRRC40                0.083   leucine rich repeat containing 40 
LRRC8B                0.082   leucine rich repeat containing 8 family, member B [...
LRRC8B                0.082   leucine rich repeat containing 8 family, member B [H...
LRRIQ1                0.077   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.077   leucine-rich repeats and IQ motif containing 1 isof...
LRRC67                0.077   leucine rich repeat containing 67 
LRRC1                 0.076   leucine rich repeat containing 1 
LRRC8C                0.073   leucine rich repeat containing 8 family, member C [H...
LRRC8A                0.073   leucine rich repeat containing 8 family, member A [H...
LRRC8A                0.073   leucine rich repeat containing 8 family, member A [...
LRRC8A                0.073   leucine rich repeat containing 8 family, member A [...
LRIG2                 0.071   leucine-rich repeats and immunoglobulin-like domains ...
LRIG1                 0.070   leucine-rich repeats and immunoglobulin-like domains...
LOC654258             0.068   PREDICTED: similar to leucine rich repeat containin...
LRRC4C                0.068   netrin-G1 ligand 
LRRC7                 0.067   leucine rich repeat containing 7 
ERBB2IP               0.067   ERBB2 interacting protein isoform 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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