LRRC48 10988

Name: LRRC48	Sequence: fasta or formatted (523aa)		NCBI GI: 194272222
Description: leucine rich repeat containing 48 isoform a		Referenced in: Leucine-rich Repeat Family
Other entries for this name: alt mRNA [523aa] leucine rich repeat containing 48 isoform a alt prot [457aa] leucine rich repeat containing 48 isoform b alt prot [457aa] leucine rich repeat containing 48 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.2 22 1 C cysteine 1.7 9 1 D aspartate 8.4 44 3 E glutamate 11.3 59 2 F phenylalanine 3.4 18 1 G glycine 3.3 17 1 H histidine 2.7 14 3 I isoleucine 8.0 42 2 K lysine 6.1 32 2 L leucine 14.1 74 2 M methionine 3.4 18 2 N asparagine 6.9 36 2 P proline 1.5 8 1 Q glutamine 5.0 26 2 R arginine 5.2 27 2 S serine 5.2 27 2 T threonine 2.7 14 1 V valine 4.2 22 1 W tryptophan 0.6 3 1 Y tyrosine 2.1 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat containing 48 isoform a LRRC48 1.000 leucine rich repeat containing 48 isoform a LRRC48 0.841 leucine rich repeat containing 48 isoform b LRRC48 0.841 leucine rich repeat containing 48 isoform b CEP110 0.071 centrosomal protein 110kDa PPP1R7 0.066 protein phosphatase 1, regulatory subunit 7 LRGUK 0.060 leucine-rich repeats and guanylate kinase domain con... LRRC50 0.054 leucine rich repeat containing 50 LRRC49 0.053 leucine rich repeat containing 49 LRRCC1 0.047 sodium channel associated protein 2 isoform a [Homo... NISCH 0.046 nischarin CEP97 0.045 centrosomal protein 97kDa LRRC6 0.044 leucine rich repeat containing 6 LOC654258 0.042 PREDICTED: similar to leucine rich repeat containin... LRRC23 0.042 leucine rich repeat containing 23 isoform a LRRC23 0.042 leucine rich repeat containing 23 isoform a DNAL1 0.039 axonemal dynein light chain 1 ANP32B 0.035 acidic (leucine-rich) nuclear phosphoprotein 32 famil... SNRPA1 0.033 small nuclear ribonucleoprotein polypeptide A' [Homo... LRRC7 0.030 leucine rich repeat containing 7 ANP32A 0.030 acidic (leucine-rich) nuclear phosphoprotein 32 famil... LRRC46 0.030 leucine rich repeat containing 46 LRIG3 0.029 leucine-rich repeats and immunoglobulin-like domains... LRRIQ1 0.029 leucine-rich repeats and IQ motif containing 1 isof... LRRIQ1 0.029 leucine-rich repeats and IQ motif containing 1 isof... LRIG3 0.029 leucine-rich repeats and immunoglobulin-like domain... LRRC67 0.029 leucine rich repeat containing 67 LGR6 0.029 leucine-rich repeat-containing G protein-coupled rec... LGR6 0.029 leucine-rich repeat-containing G protein-coupled rec... LOC100129335 0.027 PREDICTED: Leucine-rich repeat-containing protein E... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.