LRRC48 10990

Name: LRRC48	Sequence: fasta or formatted (457aa)		NCBI GI: 194272226
Description: leucine rich repeat containing 48 isoform b		Referenced in: Leucine-rich Repeat Family
Other entries for this name: alt prot [523aa] leucine rich repeat containing 48 isoform a alt prot [523aa] leucine rich repeat containing 48 isoform a alt mRNA [457aa] leucine rich repeat containing 48 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.6 21 1 C cysteine 1.5 7 1 D aspartate 7.2 33 3 E glutamate 11.8 54 2 F phenylalanine 4.4 20 1 G glycine 3.7 17 1 H histidine 2.2 10 3 I isoleucine 7.0 32 2 K lysine 6.1 28 2 L leucine 14.4 66 2 M methionine 3.5 16 2 N asparagine 6.8 31 2 P proline 1.8 8 1 Q glutamine 5.5 25 2 R arginine 4.6 21 2 S serine 5.5 25 2 T threonine 2.6 12 1 V valine 3.9 18 1 W tryptophan 0.4 2 1 Y tyrosine 2.4 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leucine rich repeat containing 48 isoform b LRRC48 1.000 leucine rich repeat containing 48 isoform b LRRC48 0.968 leucine rich repeat containing 48 isoform a LRRC48 0.968 leucine rich repeat containing 48 isoform a PPP1R7 0.076 protein phosphatase 1, regulatory subunit 7 CEP110 0.076 centrosomal protein 110kDa LRGUK 0.070 leucine-rich repeats and guanylate kinase domain con... LRRC50 0.063 leucine rich repeat containing 50 LRRC49 0.062 leucine rich repeat containing 49 LRRCC1 0.054 sodium channel associated protein 2 isoform a [Homo... NISCH 0.052 nischarin CEP97 0.051 centrosomal protein 97kDa LRRC6 0.050 leucine rich repeat containing 6 LOC654258 0.048 PREDICTED: similar to leucine rich repeat containin... LRRC23 0.048 leucine rich repeat containing 23 isoform a LRRC23 0.048 leucine rich repeat containing 23 isoform a DNAL1 0.044 axonemal dynein light chain 1 ANP32B 0.040 acidic (leucine-rich) nuclear phosphoprotein 32 famil... SNRPA1 0.038 small nuclear ribonucleoprotein polypeptide A' [Homo... LRRC7 0.034 leucine rich repeat containing 7 ANP32A 0.034 acidic (leucine-rich) nuclear phosphoprotein 32 famil... LRRC46 0.034 leucine rich repeat containing 46 LRIG3 0.033 leucine-rich repeats and immunoglobulin-like domains... LRRIQ1 0.033 leucine-rich repeats and IQ motif containing 1 isof... LRRIQ1 0.033 leucine-rich repeats and IQ motif containing 1 isof... LRIG3 0.033 leucine-rich repeats and immunoglobulin-like domain... LRRC67 0.033 leucine rich repeat containing 67 LGR6 0.033 leucine-rich repeat-containing G protein-coupled rec... LGR6 0.033 leucine-rich repeat-containing G protein-coupled rec... LOC100129335 0.031 PREDICTED: Leucine-rich repeat-containing protein E... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.