Guide to the Human Genome
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Name: CEP97 Sequence: fasta or formatted (865aa) NCBI GI: 31377705
Description:

centrosomal protein 97kDa

Referenced in:

Leucine-rich Repeat Family
Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         46           2
 C cysteine            1.7         15           1
 D aspartate           5.5         48           2
 E glutamate           8.6         74           3
 F phenylalanine       2.3         20           2
 G glycine             4.3         37           1
 H histidine           2.4         21           1
 I isoleucine          5.1         44           2
 K lysine              4.7         41           2
 L leucine            12.3        106           3
 M methionine          1.6         14           2
 N asparagine          5.8         50           2
 P proline             4.9         42           2
 Q glutamine           7.3         63           2
 R arginine            4.3         37           2
 S serine             10.1         87           2
 T threonine           4.9         42           2
 V valine              6.1         53           2
 W tryptophan          1.4         12           1
 Y tyrosine            1.5         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   centrosomal protein 97kDa 
NISCH                 0.035   nischarin 
PPP1R7                0.034   protein phosphatase 1, regulatory subunit 7 
LRRC49                0.032   leucine rich repeat containing 49 
LRRC48                0.027   leucine rich repeat containing 48 isoform b 
LRRC48                0.027   leucine rich repeat containing 48 isoform b 
LRRC48                0.027   leucine rich repeat containing 48 isoform a 
LRRC48                0.027   leucine rich repeat containing 48 isoform a 
CEP110                0.027   centrosomal protein 110kDa 
LRRIQ1                0.026   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.026   leucine-rich repeats and IQ motif containing 1 isof...
LRGUK                 0.022   leucine-rich repeats and guanylate kinase domain con...
LRRC40                0.021   leucine rich repeat containing 40 
LRRCC1                0.021   sodium channel associated protein 2 isoform a [Homo...
LRRC58                0.021   leucine rich repeat containing 58 
LRRC67                0.020   leucine rich repeat containing 67 
LRRC6                 0.019   leucine rich repeat containing 6 
LRRC50                0.018   leucine rich repeat containing 50 
SNRPA1                0.018   small nuclear ribonucleoprotein polypeptide A' [Homo...
LRIG3                 0.018   leucine-rich repeats and immunoglobulin-like domains...
LRRIQ3                0.018   leucine-rich repeats and IQ motif containing 3 [Hom...
LRIG3                 0.017   leucine-rich repeats and immunoglobulin-like domain...
SHOC2                 0.017   soc-2 suppressor of clear homolog 
PODNL1                0.017   podocan-like 1 isoform 3 
LOC654258             0.016   PREDICTED: similar to leucine rich repeat containin...
PHLPP1                0.016   PH domain and leucine rich repeat protein phosphatas...
LOC401387             0.016   leucine-rich repeat and death domain-containing pro...
SLITRK1               0.016   slit and trk like 1 protein 
LRRC4B                0.015   leucine rich repeat containing 4B 
LRRC70                0.015   synleurin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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