Guide to the Human Genome
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Name: MYH11 Sequence: fasta or formatted (1979aa) NCBI GI: 92091586
Description:

smooth muscle myosin heavy chain 11 isoform SM1B

Referenced in:

Myosin

Other entries for this name:
alt prot [1938aa] smooth muscle myosin heavy chain 11 isoform SM2A
alt prot [1972aa] smooth muscle myosin heavy chain 11 isoform SM1A
alt prot [1945aa] smooth muscle myosin heavy chain 11 isoform SM2B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3        184           4
 C cysteine            0.8         15           1
 D aspartate           5.4        107           2
 E glutamate          13.7        272           4
 F phenylalanine       3.0         59           2
 G glycine             3.5         70           2
 H histidine           1.3         26           1
 I isoleucine          3.9         77           2
 K lysine             10.3        204           4
 L leucine            11.2        222           3
 M methionine          2.4         47           1
 N asparagine          4.3         86           2
 P proline             1.5         30           2
 Q glutamine           7.7        153           3
 R arginine            6.3        124           2
 S serine              4.7         94           2
 T threonine           4.2         83           2
 V valine              4.3         85           3
 W tryptophan          0.5         10           2
 Y tyrosine            1.6         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 
MYH11                 0.994   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.978   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.972   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH10                 0.779   myosin, heavy polypeptide 10, non-muscle 
MYH9                  0.773   myosin, heavy polypeptide 9, non-muscle 
MYH14                 0.644   myosin, heavy chain 14 isoform 1 
MYH14                 0.643   myosin, heavy chain 14 isoform 2 
MYH14                 0.640   myosin, heavy chain 14 isoform 3 
MYH7                  0.375   myosin, heavy chain 7, cardiac muscle, beta 
MYH8                  0.372   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH6                  0.371   myosin heavy chain 6 
MYH2                  0.370   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.370   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH4                  0.369   myosin, heavy polypeptide 4, skeletal muscle 
MYH1                  0.369   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH3                  0.368   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH13                 0.360   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH7B                 0.360   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH15                 0.321   myosin, heavy polypeptide 15 
MYO5C                 0.153   myosin VC 
MYO18A                0.151   myosin 18A isoform a 
MYO18A                0.151   myosin 18A isoform b 
MYO5A                 0.151   myosin VA isoform 2 
MYO5B                 0.150   myosin VB 
MYO5A                 0.150   myosin VA isoform 1 
MYO10                 0.128   myosin X 
MYO7A                 0.124   myosin VIIA isoform 2 
MYO7A                 0.124   myosin VIIA isoform 3 
MYO7A                 0.124   myosin VIIA isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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