TPM3 23594

Name: TPM3	Sequence: fasta or formatted (248aa)		NCBI GI: 24119203
Description: tropomyosin 3 isoform 2		Referenced in: Muscle
Other entries for this name: alt prot [285aa] tropomyosin 3 isoform 1 alt prot [248aa] tropomyosin 3 isoform 4 alt prot [247aa] tropomyosin 3 isoform 3 alt prot [247aa] tropomyosin 3 isoform 5
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.3 28 2 C cysteine 1.6 4 1 D aspartate 6.5 16 2 E glutamate 21.0 52 3 F phenylalanine 0.4 1 1 G glycine 1.6 4 1 H histidine 0.8 2 1 I isoleucine 5.2 13 2 K lysine 9.3 23 1 L leucine 10.9 27 2 M methionine 2.8 7 1 N asparagine 1.6 4 1 P proline 0.0 0 0 Q glutamine 6.5 16 3 R arginine 9.3 23 2 S serine 2.4 6 1 T threonine 4.0 10 2 V valine 3.6 9 1 W tryptophan 0.0 0 0 Y tyrosine 1.2 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tropomyosin 3 isoform 2 TPM3 0.937 tropomyosin 3 isoform 4 TPM3 0.892 tropomyosin 3 isoform 3 TPM3 0.829 tropomyosin 3 isoform 5 TPM4 0.769 tropomyosin 4 isoform 2 TPM1 0.717 tropomyosin 1 alpha chain isoform 6 TPM1 0.685 tropomyosin 1 alpha chain isoform 4 TPM1 0.685 tropomyosin 1 alpha chain isoform 7 TPM3 0.679 tropomyosin 3 isoform 1 TPM2 0.679 tropomyosin 2 (beta) isoform 2 TPM1 0.670 tropomyosin 1 alpha chain isoform 3 TPM1 0.667 tropomyosin 1 alpha chain isoform 2 TPM4 0.652 tropomyosin 4 isoform 1 TPM1 0.652 tropomyosin 1 alpha chain isoform 5 TPM2 0.640 tropomyosin 2 (beta) isoform 1 TPM1 0.631 tropomyosin 1 alpha chain isoform 1 TPM2 0.571 tropomyosin 2 (beta) isoform 3 LOC645202 0.119 PREDICTED: hypothetical protein LOC645202 LOC400352 0.110 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.110 PREDICTED: similar to Putative golgin subfamily A m... LOC440243 0.110 PREDICTED: Putative golgin subfamily A member 6-lik... LOC283767 0.106 golgi autoantigen, golgin subfamily a-like LOC727832 0.106 golgi autoantigen, golgin subfamily a-like FYCO1 0.103 FYVE and coiled-coil domain containing 1 LOC100133220 0.103 PREDICTED: hypothetical protein PLEC1 0.099 plectin 1 isoform 11 PLEC1 0.099 plectin 1 isoform 10 PLEC1 0.099 plectin 1 isoform 8 PLEC1 0.099 plectin 1 isoform 7 PLEC1 0.099 plectin 1 isoform 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.