SMC1A 25283

Name: SMC1A	Sequence: fasta or formatted (1233aa)		NCBI GI: 30581135
Description: structural maintenance of chromosomes 1A		Referenced in: Spindle, M phase, and Meiosis
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.1 87 2 C cysteine 0.9 11 1 D aspartate 5.4 66 2 E glutamate 13.5 166 3 F phenylalanine 3.0 37 2 G glycine 4.2 52 2 H histidine 1.5 19 1 I isoleucine 6.0 74 2 K lysine 12.7 156 3 L leucine 8.4 104 2 M methionine 2.4 30 2 N asparagine 4.5 56 2 P proline 2.2 27 2 Q glutamine 6.8 84 3 R arginine 6.2 77 2 S serine 4.9 61 2 T threonine 3.2 39 2 V valine 4.5 55 2 W tryptophan 0.2 2 1 Y tyrosine 2.4 30 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 structural maintenance of chromosomes 1A SMC1B 0.555 SMC1 structural maintenance of chromosomes 1-like 2 ... SMC4 0.141 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC4 0.141 SMC4 structural maintenance of chromosomes 4-like 1 ... SMC2 0.109 structural maintenance of chromosomes 2 SMC2 0.109 structural maintenance of chromosomes 2 SMC2 0.109 structural maintenance of chromosomes 2 SMC3 0.087 structural maintenance of chromosomes 3 MYH14 0.050 myosin, heavy chain 14 isoform 1 MYH14 0.050 myosin, heavy chain 14 isoform 2 MYH14 0.050 myosin, heavy chain 14 isoform 3 MYH9 0.048 myosin, heavy polypeptide 9, non-muscle MYH15 0.047 myosin, heavy polypeptide 15 MYH1 0.045 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH11 0.045 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.045 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.045 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.045 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH7 0.045 myosin, heavy chain 7, cardiac muscle, beta MYH6 0.045 myosin heavy chain 6 TCHH 0.044 trichohyalin EEA1 0.044 early endosome antigen 1, 162kD CEP110 0.044 centrosomal protein 110kDa MYH13 0.043 myosin, heavy polypeptide 13, skeletal muscle [Homo... MYH10 0.043 myosin, heavy polypeptide 10, non-muscle GOLGA4 0.043 golgi autoantigen, golgin subfamily a, 4 MYH8 0.043 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH2 0.043 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.043 myosin, heavy chain 2, skeletal muscle, adult [Homo... RAD50 0.042 RAD50 homolog isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.