Guide to the Human Genome
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Name: MYH11 Sequence: fasta or formatted (1938aa) NCBI GI: 13124875
Description:

smooth muscle myosin heavy chain 11 isoform SM2A

Referenced in:

Myosin

Other entries for this name:
alt prot [1972aa] smooth muscle myosin heavy chain 11 isoform SM1A
alt prot [1945aa] smooth muscle myosin heavy chain 11 isoform SM2B
alt prot [1979aa] smooth muscle myosin heavy chain 11 isoform SM1B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3        180           4
 C cysteine            0.8         15           1
 D aspartate           5.3        103           2
 E glutamate          13.8        267           4
 F phenylalanine       2.9         56           2
 G glycine             3.4         65           1
 H histidine           1.3         26           1
 I isoleucine          3.9         76           2
 K lysine             10.5        203           4
 L leucine            11.5        222           3
 M methionine          2.4         47           1
 N asparagine          4.3         83           2
 P proline             1.6         31           3
 Q glutamine           7.9        154           3
 R arginine            6.1        118           2
 S serine              4.6         89           2
 T threonine           4.1         80           2
 V valine              4.3         83           3
 W tryptophan          0.5         10           2
 Y tyrosine            1.5         30           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 
MYH11                 0.998   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.995   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.993   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH10                 0.793   myosin, heavy polypeptide 10, non-muscle 
MYH9                  0.787   myosin, heavy polypeptide 9, non-muscle 
MYH14                 0.657   myosin, heavy chain 14 isoform 2 
MYH14                 0.655   myosin, heavy chain 14 isoform 1 
MYH14                 0.651   myosin, heavy chain 14 isoform 3 
MYH7                  0.383   myosin, heavy chain 7, cardiac muscle, beta 
MYH8                  0.381   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH6                  0.380   myosin heavy chain 6 
MYH4                  0.378   myosin, heavy polypeptide 4, skeletal muscle 
MYH3                  0.378   myosin, heavy chain 3, skeletal muscle, embryonic [H...
MYH2                  0.378   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.378   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH1                  0.377   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH7B                 0.368   myosin, heavy polypeptide 7B, cardiac muscle, beta ...
MYH13                 0.368   myosin, heavy polypeptide 13, skeletal muscle [Homo...
MYH15                 0.328   myosin, heavy polypeptide 15 
MYO5C                 0.157   myosin VC 
MYO18A                0.155   myosin 18A isoform a 
MYO18A                0.155   myosin 18A isoform b 
MYO5A                 0.155   myosin VA isoform 2 
MYO5B                 0.154   myosin VB 
MYO5A                 0.154   myosin VA isoform 1 
MYO10                 0.132   myosin X 
MYO7A                 0.127   myosin VIIA isoform 2 
MYO7A                 0.127   myosin VIIA isoform 3 
MYO7A                 0.127   myosin VIIA isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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