Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 62821787
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62821787 COBL-like 1 [Homo sapiens]
(1166 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62821787 COBL-like 1 [Homo sapiens] 2318 0.0
gi|31581524 cordon-bleu homolog [Homo sapiens] 232 1e-60
gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo sap... 57 1e-07
gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo sap... 57 1e-07
gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo sapi... 57 1e-07
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 57 1e-07
gi|150170670 piccolo isoform 2 [Homo sapiens] 51 7e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 51 7e-06
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 50 2e-05
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 50 2e-05
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 49 2e-05
gi|91982772 mucin 17 [Homo sapiens] 48 5e-05
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 47 1e-04
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 47 1e-04
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 45 4e-04
gi|55953110 retinoblastoma protein-binding zinc finger protein i... 45 4e-04
gi|20336260 retinoblastoma protein-binding zinc finger protein i... 45 4e-04
gi|20336258 retinoblastoma protein-binding zinc finger protein i... 45 4e-04
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 45 5e-04
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 44 7e-04
gi|239508790 PREDICTED: hypothetical protein, partial [Homo sapi... 44 9e-04
gi|222352122 hypothetical protein LOC284297 [Homo sapiens] 44 0.001
gi|237757326 synaptojanin 1 isoform d [Homo sapiens] 44 0.001
gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens] 43 0.002
gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens] 43 0.002
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 43 0.002
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 43 0.002
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 43 0.002
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 43 0.002
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 43 0.002
>gi|62821787 COBL-like 1 [Homo sapiens]
Length = 1166
Score = 2318 bits (6006), Expect = 0.0
Identities = 1166/1166 (100%), Positives = 1166/1166 (100%)
Query: 1 MDGRTPRPQDAPARRKPKAKAPLPPAETKYTDVSSAADSVESTAFIMEQKENMIDKDVEL 60
MDGRTPRPQDAPARRKPKAKAPLPPAETKYTDVSSAADSVESTAFIMEQKENMIDKDVEL
Sbjct: 1 MDGRTPRPQDAPARRKPKAKAPLPPAETKYTDVSSAADSVESTAFIMEQKENMIDKDVEL 60
Query: 61 SVVLPGDIIKSTTVHGSKPMMDLLIFLCAQYHLNPSSYTIDLLSAEQNHIKFKPNTPIGM 120
SVVLPGDIIKSTTVHGSKPMMDLLIFLCAQYHLNPSSYTIDLLSAEQNHIKFKPNTPIGM
Sbjct: 61 SVVLPGDIIKSTTVHGSKPMMDLLIFLCAQYHLNPSSYTIDLLSAEQNHIKFKPNTPIGM 120
Query: 121 LEVEKVILKPKMLDKKKPTPIIPEKTVRVVINFKKTQKTIVRVSPHASLQELAPIICSKC 180
LEVEKVILKPKMLDKKKPTPIIPEKTVRVVINFKKTQKTIVRVSPHASLQELAPIICSKC
Sbjct: 121 LEVEKVILKPKMLDKKKPTPIIPEKTVRVVINFKKTQKTIVRVSPHASLQELAPIICSKC 180
Query: 181 EFDPLHTLLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRESCQISQNLDIMKEKENKGF 240
EFDPLHTLLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRESCQISQNLDIMKEKENKGF
Sbjct: 181 EFDPLHTLLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRESCQISQNLDIMKEKENKGF 240
Query: 241 FSFFQRSKKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPM 300
FSFFQRSKKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPM
Sbjct: 241 FSFFQRSKKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPM 300
Query: 301 PASQSVPQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT 360
PASQSVPQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT
Sbjct: 301 PASQSVPQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT 360
Query: 361 KRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQ 420
KRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQ
Sbjct: 361 KRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQ 420
Query: 421 CTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKS 480
CTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKS
Sbjct: 421 CTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKS 480
Query: 481 QDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKK 540
QDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKK
Sbjct: 481 QDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKK 540
Query: 541 VVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERP 600
VVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERP
Sbjct: 541 VVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERP 600
Query: 601 SNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNL 660
SNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNL
Sbjct: 601 SNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNL 660
Query: 661 SDSKVEECVQTSNNNISTQHSCLSSQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHGN 720
SDSKVEECVQTSNNNISTQHSCLSSQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHGN
Sbjct: 661 SDSKVEECVQTSNNNISTQHSCLSSQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHGN 720
Query: 721 DDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSL 780
DDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSL
Sbjct: 721 DDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSL 780
Query: 781 EISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNL 840
EISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNL
Sbjct: 781 EISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNL 840
Query: 841 RTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQA 900
RTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQA
Sbjct: 841 RTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQA 900
Query: 901 KPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKM 960
KPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKM
Sbjct: 901 KPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKM 960
Query: 961 PHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSS 1020
PHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSS
Sbjct: 961 PHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSS 1020
Query: 1021 SGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKE 1080
SGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKE
Sbjct: 1021 SGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKE 1080
Query: 1081 NNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQMRQSLLTAIRSGEAAAKLKRVT 1140
NNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQMRQSLLTAIRSGEAAAKLKRVT
Sbjct: 1081 NNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQMRQSLLTAIRSGEAAAKLKRVT 1140
Query: 1141 IPSNTISVNGRSRLSHSMSPDAQDGH 1166
IPSNTISVNGRSRLSHSMSPDAQDGH
Sbjct: 1141 IPSNTISVNGRSRLSHSMSPDAQDGH 1166
>gi|31581524 cordon-bleu homolog [Homo sapiens]
Length = 1261
Score = 232 bits (592), Expect = 1e-60
Identities = 300/1160 (25%), Positives = 481/1160 (41%), Gaps = 230/1160 (19%)
Query: 1 MDGRTPRPQDAPARRKPKAKAPLPPAETKYTDVSSAADSVESTAF-----IMEQKENMID 55
MD P RK KA+AP PP + V S A ++ KE +
Sbjct: 1 MDAPRASAAKPPTGRKMKARAPPPPGKAATLHVHSDQKPPHDGALGSQQNLVRMKEALRA 60
Query: 56 KDVELSVVLPGDIIKSTTVHGSKPMMDLLIFLCAQYHLNPSSYTIDLLSAE-QNHIKFKP 114
++++VVLP + K + ++GS MMDLL+ LC Q HLNPS + +++ S+E Q + FKP
Sbjct: 61 STMDVTVVLPSGLEKRSVLNGSHAMMDLLVELCLQNHLNPSHHALEIRSSETQQPLSFKP 120
Query: 115 NTPIGMLEVEKVILKPKMLDKK-KP-TPIIPEKTVRVVINFKKTQKTIVRVSPHASLQEL 172
NT IG L V V LK K+ ++K KP P +PEK+VR+V+N+ +TQK +VRVSP LQ +
Sbjct: 121 NTLIGTLNVHTVFLKEKVPEEKVKPGPPKVPEKSVRLVVNYLRTQKAVVRVSPEVPLQNI 180
Query: 173 APIICSKCEFDPLHTLLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRESCQISQNLDIM 232
P+IC+KCE P H +LL+D + E L+L+KSLN+LG++ELYA D RE+ + S +
Sbjct: 181 LPVICAKCEVSPEHVVLLRDNIAGEELELSKSLNELGIKELYAWDNRRETFRKSSLGNDE 240
Query: 233 KEKENKGFFSFFQRSKKKRDQ-TASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPK 291
+KE K F FF+ +K+ + + P +P + H + T ++S IS K
Sbjct: 241 TDKEKKKFLGFFKVNKRSNSKGCLTTPNSP--SMHSRSLTLGPSLSLGSISGVSVKSEMK 298
Query: 292 KRRAPLPPMPASQSVPQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMS 351
KRRA PP P S QD A + +V GS
Sbjct: 299 KRRA--PPPPGSGPPVQDKA-------------------------SEKVSLGS------- 324
Query: 352 AGNSSLRRTKRKAPSPPSKIPPHQS----------DENSRVTALQPVDGVPPDSASEAN- 400
L++ KR+AP+PP PP S +EN + T + +P S S +
Sbjct: 325 --QIDLQKKKRRAPAPPPPQPPPPSPLIPNRTEDKEENRKSTMV----SLPLGSGSHCSP 378
Query: 401 --SPEELS-SPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISS-DYSL 456
+P+ LS + ET G + T E++ V P + I SL S S Y
Sbjct: 379 DGAPQVLSEAEETVSVGSCFASEDTT----EDSGVMSSP----SDIVSLDSQQDSMKYKD 430
Query: 457 EEIDEKEELSEVPKVEAENISPKSQDI--------PFVSTDIINTLKNDPDSALGNGSGE 508
+ ++E+ S+ ++ P+ + + T+ T ND + L +GE
Sbjct: 431 KWATDQEDCSDQDLAGTPDLGPQKSPLWEKNGSENSHLRTEKAVTASNDEEDLL--IAGE 488
Query: 509 FSQ------NSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKSLGPNQENVQNEI 562
F + +EE +++ TD S ++ SN ++ P+ + +
Sbjct: 489 FRKTLAELDEDLEEMEDSYETDTSSLTSSIHGASNHCP-------QDAMIPHGDTDAIPV 541
Query: 563 IVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAISYKENHLA-- 620
E ++D + +G+ N G + + + + +A + +E A
Sbjct: 542 TFIGEVSDDPVDSGLFSNRNNNAGSFDSEGVASRRDSLAPLQAEHSQPHEKAREEVPALH 601
Query: 621 -ASSVPDQKLNQPSAEKTKDA-AIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNIST 678
AS + + + +KD ++T P SF NL ++KV++ V
Sbjct: 602 PASHDVGKGIRVALSNISKDGNLMETAPRVTSFASNLHTDNL-NAKVKDKV--------- 651
Query: 679 QHSCLSSQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASY 738
+ C + R+Q T ++S+ PV+ D N +
Sbjct: 652 -YGCADGE---------RTQATERVNSQ-------------------PVNEKDSNDKNAA 682
Query: 739 LKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSLE--ISKDWQSETIEYKDD 796
L +++ NP + Y K G+TTYKI+PPKS +D T K D
Sbjct: 683 LAPTSWHQRGQNP--------GKSYRLKHGLTTYKIIPPKSEMRCYDRDVSLSTGAIKID 734
Query: 797 Q-----DMHALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKP--KPNLRTEH----- 844
+ HA G + I + S++ E+ +P+ ++ + N +H
Sbjct: 735 ELGNLVSPHATGIR----------IISLSSSVPEAESQPIGKVREFWRCNSVEKHLGRPS 784
Query: 845 ----------QVPSSVSSPDDAMVS---PLKPAPKMTRDTGTAPFAPNLEEINNILESKF 891
VP+ +P+ + + P+ P K G P + +
Sbjct: 785 ESSARGPPSTPVPTQTQNPESRLQADPKPISPQQKSAHHEGRNPLGEGRNQPPTMGMGHV 844
Query: 892 KSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAER------D 945
+ A++ FL+ Q+R S YV SA AK + A A + AE+
Sbjct: 845 RVPAAHT---TEVTFLKPQRRTSSQYVASAIAKRIGAPKVHADVVRPHGYAEKGYAGKAP 901
Query: 946 MLPSPEQTL-SPLSKMPHSVPQ--------PLVEKTDDDVIGQAPAEASPPPIAPKPVTI 996
+L +P T+ + PHS Q P V T + G+ A +PP V
Sbjct: 902 VLAAPPVTVKDDRTSSPHSETQGWKDGAQWPCV--TPPNNHGEDLAVGAPP---RGEVIG 956
Query: 997 PASQVSTQNLKTLKTFGAPRPYSSSGPSPFAL--------AVVKRSQSFS-KERTESPSA 1047
P ++STQ+ RP + S F+L V +S FS K+ T S A
Sbjct: 957 PHRKLSTQD----------RPAAIHRSSCFSLVQSSQRDRVSVGQSCGFSGKQSTSSQEA 1006
Query: 1048 SALVQP---PANTEEGKTHS 1064
S+ +P P T+ H+
Sbjct: 1007 SSASEPRRAPDGTDPPPPHT 1026
>gi|148727245 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 57.0 bits (136), Expect = 1e-07
Identities = 78/278 (28%), Positives = 106/278 (38%), Gaps = 44/278 (15%)
Query: 288 DAPKKRRAPLPP----MPASQSVP--QDLAHIQERPASCIVKSMSVDETD--KSPCEAGR 339
D PK + P +P S + P L +I A VK E+D KSP E +
Sbjct: 126 DLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNI----AKTSVKPSQPKESDIPKSPEETIQ 181
Query: 340 VRAGSLQLSSMSA-----GNSSLRRTKRKAP-------SPPSKIPPHQSD-ENSRVTALQ 386
+ G + SS GN K P SP I P + D S A+Q
Sbjct: 182 PKEGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISKSPEEAIQPKEGDLPKSLEEAIQ 241
Query: 387 PVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEET---SVFECPGTPEAAI 443
P +G P S EA P+E P++ + +E PK EET + P +PE AI
Sbjct: 242 PKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEG-DIPKSPEETIQPKKGDIPKSPEEAI 300
Query: 444 TSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALG 503
I + I KE ++PK E I PK DIP + I ++D
Sbjct: 301 QPKEGDIPKSPK-QAIQPKE--GDIPKSLEEAIPPKEIDIPKSPEETIQPKEDD------ 351
Query: 504 NGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKV 541
S S+EE +K D +P + G KV
Sbjct: 352 ------SPKSLEEATPSKEGDILKPEEETMEFPEGDKV 383
Score = 37.4 bits (85), Expect = 0.084
Identities = 76/363 (20%), Positives = 138/363 (38%), Gaps = 34/363 (9%)
Query: 457 EEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEE 516
EE D +E ++PK A PK D P S + I + D A E + S +E
Sbjct: 11 EESDASQEGDDLPKSSANTSHPKQDDSPKSSEETIQPKEGDIPKA-----PEETIQSKKE 65
Query: 517 KQETKSTDGQEPHSVVYDTSNGKKVVDSIRNL--KSLGPNQENVQNEIIVYPENTEDNMK 574
S +P S+ K + + N+ S+ P+Q + +I PE T + K
Sbjct: 66 DLPKSSEKAIQPKESNIPKSSAKPIQPKLGNIPKASVKPSQPK-EGDIPKAPEETIQSKK 124
Query: 575 NGVKKTEINVEGV-AKNNNIDMEVERPSNSEAHETDTAISYKENHLAASSVP--DQKLNQ 631
+ K+ + E + K +I +P + S K + S +P ++ Q
Sbjct: 125 EDLPKS--SEEAIQPKEGDIPKSSAKPIQPKLGNI-AKTSVKPSQPKESDIPKSPEETIQ 181
Query: 632 P-------SAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNI--STQHSC 682
P S+ K + P + + ++ ++S S EE +Q ++ S + +
Sbjct: 182 PKEGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISKSP-EEAIQPKEGDLPKSLEEAI 240
Query: 683 LSSQDSVNTSREFRSQ---GTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYL 739
+ + S E Q G + E+ + K+ ++ + P S +
Sbjct: 241 QPKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAI 300
Query: 740 KNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDM 799
+ D PK + + IPK + + +PPK ++I K ETI+ K+D
Sbjct: 301 QP---KEGDIPKSPKQAIQPKEGDIPK---SLEEAIPPKEIDIPKS-PEETIQPKEDDSP 353
Query: 800 HAL 802
+L
Sbjct: 354 KSL 356
Score = 35.0 bits (79), Expect = 0.42
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 267 RPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQSVPQDLAHIQERPASCIVKSMS 326
+P+ + ISK P +A + + LP P++ I + P I
Sbjct: 208 KPSQPKEGDISKS------PEEAIQPKEGDLPKSLEEAIQPKE-GDIPKSPEEAIQPKEG 260
Query: 327 VDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAP-SPPSKIPPHQSD-ENSRVTA 384
+ KS EA + + G + S +++ K P SP I P + D S A
Sbjct: 261 --DIPKSLEEAIQPKEGDIPKSP----EETIQPKKGDIPKSPEEAIQPKEGDIPKSPKQA 314
Query: 385 LQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETS 431
+QP +G P S EA P+E+ P++ + +E +PK +EE +
Sbjct: 315 IQPKEGDIPKSLEEAIPPKEIDIPKSPEETIQPKED-DSPKSLEEAT 360
>gi|148727319 thioredoxin domain-containing 2 isoform 2 [Homo
sapiens]
Length = 553
Score = 57.0 bits (136), Expect = 1e-07
Identities = 78/278 (28%), Positives = 106/278 (38%), Gaps = 44/278 (15%)
Query: 288 DAPKKRRAPLPP----MPASQSVP--QDLAHIQERPASCIVKSMSVDETD--KSPCEAGR 339
D PK + P +P S + P L +I A VK E+D KSP E +
Sbjct: 193 DLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNI----AKTSVKPSQPKESDIPKSPEETIQ 248
Query: 340 VRAGSLQLSSMSA-----GNSSLRRTKRKAP-------SPPSKIPPHQSD-ENSRVTALQ 386
+ G + SS GN K P SP I P + D S A+Q
Sbjct: 249 PKEGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISKSPEEAIQPKEGDLPKSLEEAIQ 308
Query: 387 PVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEET---SVFECPGTPEAAI 443
P +G P S EA P+E P++ + +E PK EET + P +PE AI
Sbjct: 309 PKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEG-DIPKSPEETIQPKKGDIPKSPEEAI 367
Query: 444 TSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALG 503
I + I KE ++PK E I PK DIP + I ++D
Sbjct: 368 QPKEGDIPKSPK-QAIQPKE--GDIPKSLEEAIPPKEIDIPKSPEETIQPKEDD------ 418
Query: 504 NGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKV 541
S S+EE +K D +P + G KV
Sbjct: 419 ------SPKSLEEATPSKEGDILKPEEETMEFPEGDKV 450
Score = 37.4 bits (85), Expect = 0.084
Identities = 76/363 (20%), Positives = 138/363 (38%), Gaps = 34/363 (9%)
Query: 457 EEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEE 516
EE D +E ++PK A PK D P S + I + D A E + S +E
Sbjct: 78 EESDASQEGDDLPKSSANTSHPKQDDSPKSSEETIQPKEGDIPKA-----PEETIQSKKE 132
Query: 517 KQETKSTDGQEPHSVVYDTSNGKKVVDSIRNL--KSLGPNQENVQNEIIVYPENTEDNMK 574
S +P S+ K + + N+ S+ P+Q + +I PE T + K
Sbjct: 133 DLPKSSEKAIQPKESNIPKSSAKPIQPKLGNIPKASVKPSQPK-EGDIPKAPEETIQSKK 191
Query: 575 NGVKKTEINVEGV-AKNNNIDMEVERPSNSEAHETDTAISYKENHLAASSVP--DQKLNQ 631
+ K+ + E + K +I +P + S K + S +P ++ Q
Sbjct: 192 EDLPKS--SEEAIQPKEGDIPKSSAKPIQPKLGNI-AKTSVKPSQPKESDIPKSPEETIQ 248
Query: 632 P-------SAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNI--STQHSC 682
P S+ K + P + + ++ ++S S EE +Q ++ S + +
Sbjct: 249 PKEGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISKSP-EEAIQPKEGDLPKSLEEAI 307
Query: 683 LSSQDSVNTSREFRSQ---GTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYL 739
+ + S E Q G + E+ + K+ ++ + P S +
Sbjct: 308 QPKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAI 367
Query: 740 KNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDM 799
+ D PK + + IPK + + +PPK ++I K ETI+ K+D
Sbjct: 368 QP---KEGDIPKSPKQAIQPKEGDIPK---SLEEAIPPKEIDIPKS-PEETIQPKEDDSP 420
Query: 800 HAL 802
+L
Sbjct: 421 KSL 423
Score = 35.0 bits (79), Expect = 0.42
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 267 RPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQSVPQDLAHIQERPASCIVKSMS 326
+P+ + ISK P +A + + LP P++ I + P I
Sbjct: 275 KPSQPKEGDISKS------PEEAIQPKEGDLPKSLEEAIQPKE-GDIPKSPEEAIQPKEG 327
Query: 327 VDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAP-SPPSKIPPHQSD-ENSRVTA 384
+ KS EA + + G + S +++ K P SP I P + D S A
Sbjct: 328 --DIPKSLEEAIQPKEGDIPKSP----EETIQPKKGDIPKSPEEAIQPKEGDIPKSPKQA 381
Query: 385 LQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETS 431
+QP +G P S EA P+E+ P++ + +E +PK +EE +
Sbjct: 382 IQPKEGDIPKSLEEAIPPKEIDIPKSPEETIQPKED-DSPKSLEEAT 427
>gi|42516570 thioredoxin domain-containing 2 isoform 1 [Homo
sapiens]
Length = 486
Score = 57.0 bits (136), Expect = 1e-07
Identities = 78/278 (28%), Positives = 106/278 (38%), Gaps = 44/278 (15%)
Query: 288 DAPKKRRAPLPP----MPASQSVP--QDLAHIQERPASCIVKSMSVDETD--KSPCEAGR 339
D PK + P +P S + P L +I A VK E+D KSP E +
Sbjct: 126 DLPKSSEEAIQPKEGDIPKSSAKPIQPKLGNI----AKTSVKPSQPKESDIPKSPEETIQ 181
Query: 340 VRAGSLQLSSMSA-----GNSSLRRTKRKAP-------SPPSKIPPHQSD-ENSRVTALQ 386
+ G + SS GN K P SP I P + D S A+Q
Sbjct: 182 PKEGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISKSPEEAIQPKEGDLPKSLEEAIQ 241
Query: 387 PVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEET---SVFECPGTPEAAI 443
P +G P S EA P+E P++ + +E PK EET + P +PE AI
Sbjct: 242 PKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEG-DIPKSPEETIQPKKGDIPKSPEEAI 300
Query: 444 TSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALG 503
I + I KE ++PK E I PK DIP + I ++D
Sbjct: 301 QPKEGDIPKSPK-QAIQPKE--GDIPKSLEEAIPPKEIDIPKSPEETIQPKEDD------ 351
Query: 504 NGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKV 541
S S+EE +K D +P + G KV
Sbjct: 352 ------SPKSLEEATPSKEGDILKPEEETMEFPEGDKV 383
Score = 37.4 bits (85), Expect = 0.084
Identities = 76/363 (20%), Positives = 138/363 (38%), Gaps = 34/363 (9%)
Query: 457 EEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEE 516
EE D +E ++PK A PK D P S + I + D A E + S +E
Sbjct: 11 EESDASQEGDDLPKSSANTSHPKQDDSPKSSEETIQPKEGDIPKA-----PEETIQSKKE 65
Query: 517 KQETKSTDGQEPHSVVYDTSNGKKVVDSIRNL--KSLGPNQENVQNEIIVYPENTEDNMK 574
S +P S+ K + + N+ S+ P+Q + +I PE T + K
Sbjct: 66 DLPKSSEKAIQPKESNIPKSSAKPIQPKLGNIPKASVKPSQPK-EGDIPKAPEETIQSKK 124
Query: 575 NGVKKTEINVEGV-AKNNNIDMEVERPSNSEAHETDTAISYKENHLAASSVP--DQKLNQ 631
+ K+ + E + K +I +P + S K + S +P ++ Q
Sbjct: 125 EDLPKS--SEEAIQPKEGDIPKSSAKPIQPKLGNI-AKTSVKPSQPKESDIPKSPEETIQ 181
Query: 632 P-------SAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNI--STQHSC 682
P S+ K + P + + ++ ++S S EE +Q ++ S + +
Sbjct: 182 PKEGDIPKSSAKPIQPKLGNIPKASVKPSQPKEGDISKSP-EEAIQPKEGDLPKSLEEAI 240
Query: 683 LSSQDSVNTSREFRSQ---GTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYL 739
+ + S E Q G + E+ + K+ ++ + P S +
Sbjct: 241 QPKEGDIPKSPEEAIQPKEGDIPKSLEEAIQPKEGDIPKSPEETIQPKKGDIPKSPEEAI 300
Query: 740 KNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDM 799
+ D PK + + IPK + + +PPK ++I K ETI+ K+D
Sbjct: 301 QP---KEGDIPKSPKQAIQPKEGDIPK---SLEEAIPPKEIDIPKS-PEETIQPKEDDSP 353
Query: 800 HAL 802
+L
Sbjct: 354 KSL 356
Score = 35.0 bits (79), Expect = 0.42
Identities = 42/167 (25%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 267 RPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQSVPQDLAHIQERPASCIVKSMS 326
+P+ + ISK P +A + + LP P++ I + P I
Sbjct: 208 KPSQPKEGDISKS------PEEAIQPKEGDLPKSLEEAIQPKE-GDIPKSPEEAIQPKEG 260
Query: 327 VDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAP-SPPSKIPPHQSD-ENSRVTA 384
+ KS EA + + G + S +++ K P SP I P + D S A
Sbjct: 261 --DIPKSLEEAIQPKEGDIPKSP----EETIQPKKGDIPKSPEEAIQPKEGDIPKSPKQA 314
Query: 385 LQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETS 431
+QP +G P S EA P+E+ P++ + +E +PK +EE +
Sbjct: 315 IQPKEGDIPKSLEEAIPPKEIDIPKSPEETIQPKED-DSPKSLEEAT 360
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 56.6 bits (135), Expect = 1e-07
Identities = 162/832 (19%), Positives = 308/832 (37%), Gaps = 131/832 (15%)
Query: 247 SKKKRDQTASAPATPLVNKHRPTFTRSNTISK---------PYISNTLPSDAPKKRRAPL 297
S ++R + S+ +P R T RS ++S P S++ S K +
Sbjct: 924 SPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPET 983
Query: 298 PPMPA-SQSV-PQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQL-----SSM 350
PP + S S+ P Q P + S S +KS + GSL L SS
Sbjct: 984 PPRQSHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSST 1043
Query: 351 SAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPET 410
G S + + P H+SD +S P S + SP S +T
Sbjct: 1044 PPGESYFGVSSLQLKGQSQTSPDHRSDTSS-----------PEVRQSHSESPSLQSKSQT 1092
Query: 411 FHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPK 470
G S+ +L + + + G A+ L SG+S + S + D S P
Sbjct: 1093 SPKGGRSRSSSPVTELASRSPIRQDRGEFSAS-PMLKSGMSPEQSRFQSDS----SSYPT 1147
Query: 471 VEAENISPKSQDIPFVSTD-IINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPH 529
V++ ++ +S+ S + + + D ++ +FS ++++ E+
Sbjct: 1148 VDSNSLLGQSRLETAESKEKMALPPQEDATASPPRQKDKFSPFPVQDRPESSL------- 1200
Query: 530 SVVYDTSNGKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAK 589
V DT R G + E + + + ++ + V+K+E +
Sbjct: 1201 -VFKDTLRTPP-----RERSGAGSSPETKEQNSALPTSSQDEELMEVVEKSEEPAGQILS 1254
Query: 590 NNNIDMEVERPSNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTPSCN 649
+ + +++ SN E+ E A S DQ +Q S E A++ +
Sbjct: 1255 HLSSELKEMSTSNFESSPE------VEERPAVSLTLDQSQSQASLE-----AVEVPSMAS 1303
Query: 650 SFDGKHQDHNLSDSKVEECVQTSNNNISTQHSCLSS----QDSVNTSREFRSQGTLIIHS 705
S+ G H S +H LS+ ++S + EFR+ G L
Sbjct: 1304 SWGGPH--------------------FSPEHKELSNSPLRENSFGSPLEFRNSGPL---- 1339
Query: 706 EDPLTVKDPICAHGNDDLLPP-VDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYI 764
+ + +DL P +++++ + + + Q S+E++ + +
Sbjct: 1340 --GTEMNTGFSSEVKEDLNGPFLNQLETDPSLD------MKEQSTRSSGHSSSELSPDAV 1391
Query: 765 PKIGMTTYKIVP-------PKSLEISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQ 817
K GM++ + + P++ + + + E KD L + + + ++
Sbjct: 1392 EKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKD-----GLPRTPSRRSRSGSSPG 1446
Query: 818 TEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFA 877
D + + S + P ++ + PS S D+ P K P+ R +P +
Sbjct: 1447 LRDGSGTPSRHSLSGS---SPGMKDIPRTPSRGRSECDSSPEP-KALPQTPRPRSRSPSS 1502
Query: 878 PNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKEL 937
P E+NN + + R+ + + + + G S +++ + P+ +P+E
Sbjct: 1503 P---ELNNKCLTPQRERSGSESSVDQK---TVARTPLGQRSRSGSSQELDVKPSASPQER 1556
Query: 938 TNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIP 997
+ ++ D S +T +PL + S P V+ + + + S P + KP P
Sbjct: 1557 SESDSSPD---SKAKTRTPLRQRSRSGSSPEVD-SKSRLSPRRSRSGSSPEVKDKPRAAP 1612
Query: 998 ASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERTESPSASA 1049
+Q + + +P P P+P AL RS S SK R SP S+
Sbjct: 1613 RAQSGSDS--------SPEP---KAPAPRALPRRSRSGSSSKGRGPSPEGSS 1653
Score = 40.8 bits (94), Expect = 0.008
Identities = 69/372 (18%), Positives = 136/372 (36%), Gaps = 24/372 (6%)
Query: 809 ENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMT 868
E +E A Q SE E N + P + V ++ P M
Sbjct: 1243 EKSEEPAGQILSHLSSELKEMSTSNFESSPEVEERPAVSLTLDQSQSQASLEAVEVPSMA 1302
Query: 869 RDTGTAPFAPNLEEINN--ILESKFKSRASNAQAKP------SSFFLQMQKRVSGHYVTS 920
G F+P +E++N + E+ F S + P + F ++++ ++G ++
Sbjct: 1303 SSWGGPHFSPEHKELSNSPLRENSFGSPLEFRNSGPLGTEMNTGFSSEVKEDLNGPFLNQ 1362
Query: 921 AAAKSVHAAPNPAPKELTNKEAERDMLP-SPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQ 979
+ P+ KE + + + SP+ S+ P+++ +
Sbjct: 1363 -----LETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRE 1417
Query: 980 APAEASPPPIAPKPVTIPASQVSTQNLKTLKT-FGAPRPYSSSGPSPFALAVVKRSQSFS 1038
+ AS P + P+ + + + L+ G P +S SG SP + +
Sbjct: 1418 RSSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGR 1477
Query: 1039 KERTESPSASALVQPP-ANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTD 1097
E SP AL Q P + + +N PQ ++ + + +Q + TP
Sbjct: 1478 SECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQ---RERSGSESSVDQKTVARTPLG 1534
Query: 1098 GPSFTVMRQSSLTFQSSDPEQMRQSLLTAIRSGEAAAKLKRVTIPSNTISVNGRSRLS-- 1155
S + Q S+ P++ +S + + L++ + ++ V+ +SRLS
Sbjct: 1535 QRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPR 1594
Query: 1156 ---HSMSPDAQD 1164
SP+ +D
Sbjct: 1595 RSRSGSSPEVKD 1606
Score = 32.3 bits (72), Expect = 2.7
Identities = 49/204 (24%), Positives = 77/204 (37%), Gaps = 17/204 (8%)
Query: 869 RDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHA 928
R G APF+ ++ S A +PSS + K T + +
Sbjct: 303 RGEGDAPFSEP-----GTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERS 357
Query: 929 APNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPL-------VEKTDDDVIGQAP 981
+ P P T AER +PLS+ P + P K+ + + +
Sbjct: 358 STGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSS 417
Query: 982 AEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSP-FALAVVKRSQSFSKE 1040
+E+SPP P V+ AS S ++ K G+ R SSS S + KR +S S
Sbjct: 418 SESSPPSPQPTKVSRHASS-SPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHT 476
Query: 1041 RTESPSASALVQPPANTEEGKTHS 1064
+ S + PA + G++ S
Sbjct: 477 PSRRMGRS---RSPATAKRGRSRS 497
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 50.8 bits (120), Expect = 7e-06
Identities = 169/866 (19%), Positives = 294/866 (33%), Gaps = 135/866 (15%)
Query: 341 RAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEAN 400
R S + S +R + + +PPS + P + D P + +A
Sbjct: 1800 RKSSSKKSKKDKDELRAQRRRERPKTPPSNLSPIE-------------DASPTEELRQAA 1846
Query: 401 SPEEL--SSPETFHPGLSSQEQ---CTAPKLMEETSVFECPG-------TPEAAITSLTS 448
EEL SS + P + S + + K++E V++ P T E +I
Sbjct: 1847 EMEELHRSSCSEYSPSIESDPEGFEISPEKIIEVQKVYKLPTAVSLYSPTDEQSIMQKEG 1906
Query: 449 GISSDYSLEEIDEKEELSEVPKVEAENISPKSQDI---------PFVSTDIINTLKNDPD 499
+ S EE+ E E + + K +A + + ++ + I +L D
Sbjct: 1907 SQKALKSAEEMYE-EMMHKTHKYKAFPAANERDEVFEKEPLYGGMLIEDYIYESLVEDTY 1965
Query: 500 SALGNGS---------GEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKS 550
+ +GS G Q E+K ++P + D +K + +L S
Sbjct: 1966 NGSVDGSLLTRQEEENGFMQQKGREQKIRLSEQIYEDPMQKITDL---QKEFYELESLHS 2022
Query: 551 LGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDT 610
+ P ++ V + I+ + ++ V TE ER +
Sbjct: 2023 VVPQEDIVSSSFIIPESHEIVDLGTMVTSTE---------------EERKLLDADAAYEE 2067
Query: 611 AISYKENHLAASSVPDQK-LNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECV 669
+ ++ L S P Q + + E T D P + +L+DS +
Sbjct: 2068 LMKRQQMQLTPGSSPTQAPIGEDMTESTMD--FDRMPDASLTSSVLSGASLTDSTSSATL 2125
Query: 670 QTSNNNISTQHSCLSSQDSVNT--SREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPV 727
+ I+ S +D T +RE + +I H LT +P + +PP
Sbjct: 2126 SIPDVKITQHFSTEEIEDEYVTDYTREIQE---IIAHESLILTYSEP---SESATSVPPS 2179
Query: 728 DRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSLEISKDWQ 787
D S+ S + D + + IT Y + M T K + + S +
Sbjct: 2180 DTPSLTSSVS-----SVCTTDSSSPITTLDSITTVYTEPVDMIT-KFEDSEEISSSTYFP 2233
Query: 788 SETIEYKDD--QDMHALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQ 845
I+Y ++ + + I D A S + ++ PKP E
Sbjct: 2234 GSIIDYPEEISVSLDRTAPPDGRASADHIVISLSDMASSI-----IESVVPKP----EGP 2284
Query: 846 VPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAK---- 901
V +VS+ D ++S P K ++TG LE + E + + S+
Sbjct: 2285 VADTVST--DLLISEKDPVKKAKKETGNGIILEVLEAYRDKKELEAERTKSSLSETVFDH 2342
Query: 902 -PSSFF-LQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSK 959
PSS L M++++S Y TS E +E LPS ++S L
Sbjct: 2343 PPSSVIALPMKEQLSTTYFTSG--------------ETFGQEKPASQLPSGSPSVSSLP- 2387
Query: 960 MPHSVPQPLVEKTDDDVIGQAPAE------ASPPPIAPKPVTIPASQVSTQNLKTLKTFG 1013
+ P+P + D+ Q P PPP P P +P + K
Sbjct: 2388 ---AKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLT 2444
Query: 1014 APRPYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQ 1073
P +++ P A+ ++ + PP + S F P+
Sbjct: 2445 VASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPE 2504
Query: 1074 LGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQMRQSLLTAIRSGEAA 1133
+ A Q+PT T P+ + + L+ SS M +L+T+ A
Sbjct: 2505 ----PSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSS----MTLNLVTS-----AD 2551
Query: 1134 AKLKRVTIPSNTISVNGRSRLSHSMS 1159
KL T P + S R S S++
Sbjct: 2552 YKLPSPTSPLSPHSNKSSPRFSKSLT 2577
Score = 46.2 bits (108), Expect = 2e-04
Identities = 87/397 (21%), Positives = 139/397 (35%), Gaps = 61/397 (15%)
Query: 765 PKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGK----KHTHENVKETAIQTED 820
P+ + T + ++ S +T KD L K K VK+ +
Sbjct: 657 PQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSP 716
Query: 821 SAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPA-PKMTRDTGTAPFAPN 879
SA ++ P E KP P + PS S D A V+ KP PKM + T + +
Sbjct: 717 SAKAKQPPEADSLSKPAPP-----KEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSS 771
Query: 880 LEEINNILESKFKSRASNA--------QAKPSSFFLQMQKRVSGHYVTS----AAAKSVH 927
+I SK +S+A AKPS F ++VS + A+ +
Sbjct: 772 ATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKII 831
Query: 928 AAPNPAPKELTNKEAER-DMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASP 986
+ P P+ + K+ + P++ + +S P + P P T A
Sbjct: 832 SHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPT 891
Query: 987 PPIAPKP--------------VTIPASQVST------------------QNLKTLKTFGA 1014
P +PKP P SQ +T Q + T G
Sbjct: 892 PQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQ 951
Query: 1015 PRPYSSSGPSPFALAVVKRSQSFSKERT-ESPSASALVQPPANTEEGKTHSVNKFVDIPQ 1073
P P+S SGP A +K++ + S+ T + P S PPA + K +
Sbjct: 952 PGPHSQSGPG----APMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEK 1007
Query: 1074 LGVSDKENNSAHNEQNSQIPTP-TDGPSFTVMRQSSL 1109
L ++ + + + P P D S T Q ++
Sbjct: 1008 LEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAV 1044
Score = 32.0 bits (71), Expect = 3.5
Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 930 PNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASP--P 987
P ++ E+ + LPSP SK P + QP K G ++ P P
Sbjct: 281 PQTKQADIVRGESVKPSLPSP-------SKPP--IQQPTPGKPPAQQPGHEKSQPGPAKP 331
Query: 988 PIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFS-KERTESPS 1046
P P +T P +Q ++ G +P + P A Q+ S K +E P
Sbjct: 332 PAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQ----PLGPAKPPAQQTGSEKPSSEQPG 387
Query: 1047 ASALVQPP 1054
AL QPP
Sbjct: 388 PKALAQPP 395
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 50.8 bits (120), Expect = 7e-06
Identities = 169/866 (19%), Positives = 294/866 (33%), Gaps = 135/866 (15%)
Query: 341 RAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEAN 400
R S + S +R + + +PPS + P + D P + +A
Sbjct: 1800 RKSSSKKSKKDKDELRAQRRRERPKTPPSNLSPIE-------------DASPTEELRQAA 1846
Query: 401 SPEEL--SSPETFHPGLSSQEQ---CTAPKLMEETSVFECPG-------TPEAAITSLTS 448
EEL SS + P + S + + K++E V++ P T E +I
Sbjct: 1847 EMEELHRSSCSEYSPSIESDPEGFEISPEKIIEVQKVYKLPTAVSLYSPTDEQSIMQKEG 1906
Query: 449 GISSDYSLEEIDEKEELSEVPKVEAENISPKSQDI---------PFVSTDIINTLKNDPD 499
+ S EE+ E E + + K +A + + ++ + I +L D
Sbjct: 1907 SQKALKSAEEMYE-EMMHKTHKYKAFPAANERDEVFEKEPLYGGMLIEDYIYESLVEDTY 1965
Query: 500 SALGNGS---------GEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKS 550
+ +GS G Q E+K ++P + D +K + +L S
Sbjct: 1966 NGSVDGSLLTRQEEENGFMQQKGREQKIRLSEQIYEDPMQKITDL---QKEFYELESLHS 2022
Query: 551 LGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDT 610
+ P ++ V + I+ + ++ V TE ER +
Sbjct: 2023 VVPQEDIVSSSFIIPESHEIVDLGTMVTSTE---------------EERKLLDADAAYEE 2067
Query: 611 AISYKENHLAASSVPDQK-LNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECV 669
+ ++ L S P Q + + E T D P + +L+DS +
Sbjct: 2068 LMKRQQMQLTPGSSPTQAPIGEDMTESTMD--FDRMPDASLTSSVLSGASLTDSTSSATL 2125
Query: 670 QTSNNNISTQHSCLSSQDSVNT--SREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPV 727
+ I+ S +D T +RE + +I H LT +P + +PP
Sbjct: 2126 SIPDVKITQHFSTEEIEDEYVTDYTREIQE---IIAHESLILTYSEP---SESATSVPPS 2179
Query: 728 DRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSLEISKDWQ 787
D S+ S + D + + IT Y + M T K + + S +
Sbjct: 2180 DTPSLTSSVS-----SVCTTDSSSPITTLDSITTVYTEPVDMIT-KFEDSEEISSSTYFP 2233
Query: 788 SETIEYKDD--QDMHALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQ 845
I+Y ++ + + I D A S + ++ PKP E
Sbjct: 2234 GSIIDYPEEISVSLDRTAPPDGRASADHIVISLSDMASSI-----IESVVPKP----EGP 2284
Query: 846 VPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAK---- 901
V +VS+ D ++S P K ++TG LE + E + + S+
Sbjct: 2285 VADTVST--DLLISEKDPVKKAKKETGNGIILEVLEAYRDKKELEAERTKSSLSETVFDH 2342
Query: 902 -PSSFF-LQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSK 959
PSS L M++++S Y TS E +E LPS ++S L
Sbjct: 2343 PPSSVIALPMKEQLSTTYFTSG--------------ETFGQEKPASQLPSGSPSVSSLP- 2387
Query: 960 MPHSVPQPLVEKTDDDVIGQAPAE------ASPPPIAPKPVTIPASQVSTQNLKTLKTFG 1013
+ P+P + D+ Q P PPP P P +P + K
Sbjct: 2388 ---AKPRPFFRSSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLT 2444
Query: 1014 APRPYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQ 1073
P +++ P A+ ++ + PP + S F P+
Sbjct: 2445 VASPVTTATPLFDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPE 2504
Query: 1074 LGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQMRQSLLTAIRSGEAA 1133
+ A Q+PT T P+ + + L+ SS M +L+T+ A
Sbjct: 2505 ----PSKPPIAPKPVIPQLPTTTQKPTDIHPKPTGLSLTSS----MTLNLVTS-----AD 2551
Query: 1134 AKLKRVTIPSNTISVNGRSRLSHSMS 1159
KL T P + S R S S++
Sbjct: 2552 YKLPSPTSPLSPHSNKSSPRFSKSLT 2577
Score = 46.2 bits (108), Expect = 2e-04
Identities = 87/397 (21%), Positives = 139/397 (35%), Gaps = 61/397 (15%)
Query: 765 PKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGK----KHTHENVKETAIQTED 820
P+ + T + ++ S +T KD L K K VK+ +
Sbjct: 657 PQPKLKTAPVTTTSAVSKSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHGSP 716
Query: 821 SAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPA-PKMTRDTGTAPFAPN 879
SA ++ P E KP P + PS S D A V+ KP PKM + T + +
Sbjct: 717 SAKAKQPPEADSLSKPAPP-----KEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSS 771
Query: 880 LEEINNILESKFKSRASNA--------QAKPSSFFLQMQKRVSGHYVTS----AAAKSVH 927
+I SK +S+A AKPS F ++VS + A+ +
Sbjct: 772 ATTKPDIPSSKVQSQAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKII 831
Query: 928 AAPNPAPKELTNKEAER-DMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASP 986
+ P P+ + K+ + P++ + +S P + P P T A
Sbjct: 832 SHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMPKGSPTPPGPRPTAGQTVPT 891
Query: 987 PPIAPKP--------------VTIPASQVST------------------QNLKTLKTFGA 1014
P +PKP P SQ +T Q + T G
Sbjct: 892 PQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKLFGFGASIFSQASNLISTAGQ 951
Query: 1015 PRPYSSSGPSPFALAVVKRSQSFSKERT-ESPSASALVQPPANTEEGKTHSVNKFVDIPQ 1073
P P+S SGP A +K++ + S+ T + P S PPA + K +
Sbjct: 952 PGPHSQSGPG----APMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVKKETKAPAAEK 1007
Query: 1074 LGVSDKENNSAHNEQNSQIPTP-TDGPSFTVMRQSSL 1109
L ++ + + + P P D S T Q ++
Sbjct: 1008 LEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEPQKAV 1044
Score = 32.0 bits (71), Expect = 3.5
Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 930 PNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASP--P 987
P ++ E+ + LPSP SK P + QP K G ++ P P
Sbjct: 281 PQTKQADIVRGESVKPSLPSP-------SKPP--IQQPTPGKPPAQQPGHEKSQPGPAKP 331
Query: 988 PIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFS-KERTESPS 1046
P P +T P +Q ++ G +P + P A Q+ S K +E P
Sbjct: 332 PAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQ----PLGPAKPPAQQTGSEKPSSEQPG 387
Query: 1047 ASALVQPP 1054
AL QPP
Sbjct: 388 PKALAQPP 395
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 49.7 bits (117), Expect = 2e-05
Identities = 73/353 (20%), Positives = 144/353 (40%), Gaps = 29/353 (8%)
Query: 781 EISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQT----------EDSAISESPEEP 830
+ SKD +SE + K+++ K +N E + E S++ S E
Sbjct: 1079 DYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEV 1138
Query: 831 LPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESK 890
+KP P + E +P+ +S PA K+ + T + E I+N E
Sbjct: 1139 TEIVKPSPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPS 1198
Query: 891 FKSRASNAQAKPSSFFLQMQKRVSGHYVTSAA----AKSVHAAPNPAPKELTNKEAERDM 946
K +++++ K +++++V+G +S+ + +P K + +R +
Sbjct: 1199 EKLESTSSKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTV 1258
Query: 947 LPSPEQ----TLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPASQVS 1002
+ + E+ +P + + P + DD + S PI+ V PAS +
Sbjct: 1259 IKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQPIS--SVGKPASVI- 1315
Query: 1003 TQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKT 1062
+N+ T + P S PS + K ++ S E + S+ + A++E+GKT
Sbjct: 1316 -KNVSTKPSNIVKYPEKESEPSE---KIQKFTKDVSHEIIQHEVKSS--KNSASSEKGKT 1369
Query: 1063 HSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSD 1115
++ + + +K NS E+ S + + +F + QSS ++SD
Sbjct: 1370 K--DRDYSVLEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKEARTSD 1420
Score = 32.3 bits (72), Expect = 2.7
Identities = 141/757 (18%), Positives = 267/757 (35%), Gaps = 98/757 (12%)
Query: 188 LLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRESCQISQNLDIMKEKENKGFFSFFQRS 247
LL +S+EP + ++ D L+ + ++ + D + E+ F S ++
Sbjct: 919 LLETSRKSREPTGVEENKTD----SLFVLPSRDDATPVR---DEPMDAESITFKSVSEKD 971
Query: 248 KKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKR--RAPLPPMPASQS 305
K++RD+ + ++ I KP D ++R R+ P A +
Sbjct: 972 KRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEE 1031
Query: 306 VP-----------QDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGN 354
P Q I P KS + K P + +V+ + + +
Sbjct: 1032 TPKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETK-PVKEEKVKKDYSK--DVKSEK 1088
Query: 355 SSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPG 414
+ + K K P+ +K ++ ++ R T + GV D S + +L E P
Sbjct: 1089 LTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEK---GVDKDFESSSMKISKLEVTEIVKP- 1144
Query: 415 LSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAE 474
+PK E + TPE SL++ E +K +E
Sbjct: 1145 --------SPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTE----NIS 1192
Query: 475 NISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYD 534
N S+ + S+ + G+ E S +++ + T ST G
Sbjct: 1193 NTKEPSEKLESTSSKVKQEKVKGKVRRKVTGT-EGSSSTLVDYTSTSSTGGSPVRKSEEK 1251
Query: 535 TSNGKKVVDSIRNLKSLGPNQENVQNEIIV-------YPENTEDNMKNGVKKTEINVEGV 587
T + V+ ++ + N ++ II+ + ++ ++ + VK T+ + V
Sbjct: 1252 TDTKRTVIKTMEEYNN--DNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQ-PISSV 1308
Query: 588 AKNNNIDMEVE-RPSNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTP 646
K ++ V +PSN + Y E S + S E + +
Sbjct: 1309 GKPASVIKNVSTKPSN--------IVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKN 1360
Query: 647 SCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQHSCLSSQDSVNTSREFRS--QGTLIIH 704
S +S GK +D + S + E + N STQ S+ D +N F+S Q +
Sbjct: 1361 SASSEKGKTKDRDYSVLEKENPEKRKN---STQPEKESNLDRLNEQGNFKSLSQSSKEAR 1417
Query: 705 SEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYI 764
+ D D A N D P D+ T Y + R + N + + +R
Sbjct: 1418 TSDK---HDSTRASSNKDFTPNRDKKTDYDTREYSSSKR--RDEKNELTRRKDSPSRN-- 1470
Query: 765 PKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDS-AI 823
K + K P + ++ K ++ K + K H H+ +T E++ ++
Sbjct: 1471 -KDSASGQKNKPREERDLPKKGTGDS--KKSNSSPSRDRKPHDHKATYDTKRPNEETKSV 1527
Query: 824 SESP--EEPLPNLKPKPNLRTEHQVPSSVSSPDDAMV-----------SPLKPAPKM--- 867
++P + L+ + N + + +P + V S +KP P++
Sbjct: 1528 DKNPCKDREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSHS 1587
Query: 868 -------TRDTGTAPFAPNLEEINNILESKFKSRASN 897
TR+T A F P+ E ++ K S+
Sbjct: 1588 SRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEESS 1624
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 49.7 bits (117), Expect = 2e-05
Identities = 73/353 (20%), Positives = 144/353 (40%), Gaps = 29/353 (8%)
Query: 781 EISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQT----------EDSAISESPEEP 830
+ SKD +SE + K+++ K +N E + E S++ S E
Sbjct: 1113 DYSKDVKSEKLTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEKGVDKDFESSSMKISKLEV 1172
Query: 831 LPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESK 890
+KP P + E +P+ +S PA K+ + T + E I+N E
Sbjct: 1173 TEIVKPSPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTENISNTKEPS 1232
Query: 891 FKSRASNAQAKPSSFFLQMQKRVSGHYVTSAA----AKSVHAAPNPAPKELTNKEAERDM 946
K +++++ K +++++V+G +S+ + +P K + +R +
Sbjct: 1233 EKLESTSSKVKQEKVKGKVRRKVTGTEGSSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTV 1292
Query: 947 LPSPEQ----TLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPASQVS 1002
+ + E+ +P + + P + DD + S PI+ V PAS +
Sbjct: 1293 IKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQPIS--SVGKPASVI- 1349
Query: 1003 TQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKT 1062
+N+ T + P S PS + K ++ S E + S+ + A++E+GKT
Sbjct: 1350 -KNVSTKPSNIVKYPEKESEPSE---KIQKFTKDVSHEIIQHEVKSS--KNSASSEKGKT 1403
Query: 1063 HSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSD 1115
++ + + +K NS E+ S + + +F + QSS ++SD
Sbjct: 1404 K--DRDYSVLEKENPEKRKNSTQPEKESNLDRLNEQGNFKSLSQSSKEARTSD 1454
Score = 32.3 bits (72), Expect = 2.7
Identities = 141/757 (18%), Positives = 267/757 (35%), Gaps = 98/757 (12%)
Query: 188 LLLKDYQSQEPLDLTKSLNDLGLRELYAMDVNRESCQISQNLDIMKEKENKGFFSFFQRS 247
LL +S+EP + ++ D L+ + ++ + D + E+ F S ++
Sbjct: 953 LLETSRKSREPTGVEENKTD----SLFVLPSRDDATPVR---DEPMDAESITFKSVSEKD 1005
Query: 248 KKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKR--RAPLPPMPASQS 305
K++RD+ + ++ I KP D ++R R+ P A +
Sbjct: 1006 KRERDKPKAKGDKTKRKNDGSAVSKKENIVKPAKGPQEKVDGERERSPRSEPPIKKAKEE 1065
Query: 306 VP-----------QDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGN 354
P Q I P KS + K P + +V+ + + +
Sbjct: 1066 TPKTDNTKSSSSSQKDEKITGTPRKAHSKSAKEHQETK-PVKEEKVKKDYSK--DVKSEK 1122
Query: 355 SSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPG 414
+ + K K P+ +K ++ ++ R T + GV D S + +L E P
Sbjct: 1123 LTTKEEKAKKPNEKNKPLDNKGEKRKRKTEEK---GVDKDFESSSMKISKLEVTEIVKP- 1178
Query: 415 LSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAE 474
+PK E + TPE SL++ E +K +E
Sbjct: 1179 --------SPKRKMEPDTEKMDRTPEKDKISLSAPAKKIKLNRETGKKIGSTE----NIS 1226
Query: 475 NISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYD 534
N S+ + S+ + G+ E S +++ + T ST G
Sbjct: 1227 NTKEPSEKLESTSSKVKQEKVKGKVRRKVTGT-EGSSSTLVDYTSTSSTGGSPVRKSEEK 1285
Query: 535 TSNGKKVVDSIRNLKSLGPNQENVQNEIIV-------YPENTEDNMKNGVKKTEINVEGV 587
T + V+ ++ + N ++ II+ + ++ ++ + VK T+ + V
Sbjct: 1286 TDTKRTVIKTMEEYNN--DNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKSTQ-PISSV 1342
Query: 588 AKNNNIDMEVE-RPSNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTP 646
K ++ V +PSN + Y E S + S E + +
Sbjct: 1343 GKPASVIKNVSTKPSN--------IVKYPEKESEPSEKIQKFTKDVSHEIIQHEVKSSKN 1394
Query: 647 SCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQHSCLSSQDSVNTSREFRS--QGTLIIH 704
S +S GK +D + S + E + N STQ S+ D +N F+S Q +
Sbjct: 1395 SASSEKGKTKDRDYSVLEKENPEKRKN---STQPEKESNLDRLNEQGNFKSLSQSSKEAR 1451
Query: 705 SEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYI 764
+ D D A N D P D+ T Y + R + N + + +R
Sbjct: 1452 TSDK---HDSTRASSNKDFTPNRDKKTDYDTREYSSSKR--RDEKNELTRRKDSPSRN-- 1504
Query: 765 PKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDS-AI 823
K + K P + ++ K ++ K + K H H+ +T E++ ++
Sbjct: 1505 -KDSASGQKNKPREERDLPKKGTGDS--KKSNSSPSRDRKPHDHKATYDTKRPNEETKSV 1561
Query: 824 SESP--EEPLPNLKPKPNLRTEHQVPSSVSSPDDAMV-----------SPLKPAPKM--- 867
++P + L+ + N + + +P + V S +KP P++
Sbjct: 1562 DKNPCKDREKHVLEARNNKESSGNKLLYILNPPETQVEKEQITGQIDKSTVKPKPQLSHS 1621
Query: 868 -------TRDTGTAPFAPNLEEINNILESKFKSRASN 897
TR+T A F P+ E ++ K S+
Sbjct: 1622 SRLSSDLTRETDEAAFEPDYNESDSESNVSVKEEESS 1658
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 49.3 bits (116), Expect = 2e-05
Identities = 74/415 (17%), Positives = 151/415 (36%), Gaps = 22/415 (5%)
Query: 324 SMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVT 383
S S D +D S + S S S + S ++ S S S ++S
Sbjct: 663 SNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSN 722
Query: 384 ALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAI 443
+ DS+ +NS + S ++ + SS + + +++
Sbjct: 723 SSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSS-------------DSSNSSDSSD 769
Query: 444 TSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALG 503
+S +S S + + ++ S+ + S S D S + N DS+
Sbjct: 770 SSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNS 829
Query: 504 NGSGEFSQNSMEEKQETKSTDGQEPHSVVY-DTSNGKKVVDSIRNLKSLGPNQENVQNEI 562
+ S + S NS + + S+DG + S D+SN DS + S + + NE
Sbjct: 830 SDSSD-SSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNE- 887
Query: 563 IVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAISYKENHLAAS 622
N+ D+ + + + +++ D S+ ++ +D + S ++ + S
Sbjct: 888 ---SSNSSDSSDSSNSSDSDSSDSSNSSDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDS 944
Query: 623 SVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQHSC 682
S N + + D++ + S ++ N SDS S+++ + +S
Sbjct: 945 SDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSS 1004
Query: 683 LSSQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTAS 737
SS S ++ S + +S D D + + D D D + +++
Sbjct: 1005 DSSDSSDSSDSSNSSDSS---NSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSN 1056
Score = 43.5 bits (101), Expect = 0.001
Identities = 62/373 (16%), Positives = 140/373 (37%), Gaps = 9/373 (2%)
Query: 323 KSMSVDETDKSPCEAGRVRAGS-LQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSR 381
KSM D+ + S G A S +S S G++S + K S + D++
Sbjct: 458 KSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDS 517
Query: 382 VTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEA 441
+ D DS N+ + + G S + + + + +
Sbjct: 518 TS-----DTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSS 572
Query: 442 AITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQ--DIPFVSTDIINTLKNDPD 499
S + SSD + + + ++ + S S D S ++ K++ D
Sbjct: 573 DSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESD 632
Query: 500 SALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKSLGPNQENVQ 559
S+ + + S ++ + + + S D+S+ DS + S + +
Sbjct: 633 SSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDS 692
Query: 560 NEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAISYKENHL 619
++ E+++ + + ++ + + +++ D S+ ++ +D++ S ++
Sbjct: 693 SDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNS 752
Query: 620 AASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQ 679
+ SS N + + D++ ++ S NS D ++ S +SN++ S+
Sbjct: 753 SDSSDSSDSSNSSDSSDSSDSS-DSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSD 811
Query: 680 HSCLSSQDSVNTS 692
S S DS N+S
Sbjct: 812 SSDSSDSDSSNSS 824
Score = 37.0 bits (84), Expect = 0.11
Identities = 60/352 (17%), Positives = 135/352 (38%), Gaps = 31/352 (8%)
Query: 388 VDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPE--AAITS 445
+ G P+S+ E+N ++ +S + + + + + + G + + TS
Sbjct: 460 MQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTS 519
Query: 446 LTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALGNG 505
T+ S+ + ++ + S+ K ++++ S D N DS+ +
Sbjct: 520 DTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDS-----------SNSSDSSDSSD 568
Query: 506 SGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKSLGPNQENVQNEIIVY 565
S NS + + S S D+SN DS + S +
Sbjct: 569 SDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSS----------- 617
Query: 566 PENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAISYKENHLAASSVP 625
++ D+ + K + + +K+++ D S+ + +D++ S ++ + SS
Sbjct: 618 --DSSDSKSDSSKSESDSSDSDSKSDSSDSN----SSDSSDNSDSSDSSNSSNSSDSSDS 671
Query: 626 DQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHN-LSDSKVEECVQTSNNNISTQHSCLS 684
+ S+ + +++ + S +S + D + SDS + +SN+N S S S
Sbjct: 672 SDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNS 731
Query: 685 SQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTA 736
S S +++ S + +S D D + + D D D ++++
Sbjct: 732 SDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSS 783
Score = 36.6 bits (83), Expect = 0.14
Identities = 57/353 (16%), Positives = 130/353 (36%), Gaps = 8/353 (2%)
Query: 348 SSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSS 407
SS S+ +S+ + + S S NS ++ DS+ +NS + S
Sbjct: 950 SSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDS 1009
Query: 408 PETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSE 467
++ SS ++ S + + + + S S + D +
Sbjct: 1010 SDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDS 1069
Query: 468 VPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQE 527
++ + S S+ + + + DS+ + S + S +S + + S+D +
Sbjct: 1070 SDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSD-SSDSSDSSDSSNSSDSSD 1128
Query: 528 --PHSVVYDTSNGKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVE 585
S D+SN DS + S + + ++ ++++ + + + + +
Sbjct: 1129 SSDSSDSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSD 1188
Query: 586 GVAKNNNIDMEVERPSNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTT 645
+++ D S+ + +D++ S ++ ++ S N+ S + ++
Sbjct: 1189 SSDSSDSSDSSDSSDSSDSSDSSDSSDS-SDSSDSSDSSDSSDSNESSDSSDSSDSSDSS 1247
Query: 646 PSCNSFDGKHQDHNLSDSKVEECVQT----SNNNISTQHSCLSSQDSVNTSRE 694
S +S D + SDS E Q+ NNN S S DS +++ +
Sbjct: 1248 NSSDSSDSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSDSEGSDSNHSTSD 1300
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 48.1 bits (113), Expect = 5e-05
Identities = 172/918 (18%), Positives = 317/918 (34%), Gaps = 104/918 (11%)
Query: 255 ASAPATPLVNKHRPTFTRSNTISKPYISN--TLPSDAPKKRRAPLPPMPASQSV--PQDL 310
AS +T V+ P T + S P ++ ++P+ P + PL MP S+++ +
Sbjct: 705 ASTLSTTPVDTSTPVTTSTEASSSPTTADGASMPTSTPSEGSTPLTSMPVSKTLLTSSEA 764
Query: 311 AHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSK 370
+ + P + S + + ++ C S+ +S+ S G+ L S P
Sbjct: 765 STLSTTP---LDTSTHITTSTEASCSPTTTEGTSMPISTPSEGSPLL-------TSIPVS 814
Query: 371 IPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEET 430
I P S E S ++ P DS S + E+SS T G S T
Sbjct: 815 ITPVTSPEASTLST------TPVDSNSPVTTSTEVSSSPTPAEGTSM-----------PT 857
Query: 431 SVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDI 490
S + TP ++ T+ +++ +S + + +P + S+
Sbjct: 858 STYSEGRTPLTSMPVSTTLVAT----------SAISTLSTTPVDTSTPVTNSTEARSSPT 907
Query: 491 INTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKS 550
+ + P S G GS + + + S++ + + DTS V + S
Sbjct: 908 TSEGTSMPTSTPGEGSTPLT-SMPDSTTPVVSSEARTLSATPVDTST---PVTTSTEATS 963
Query: 551 LGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDT 610
E P +T + T ++ VA + + ++ T T
Sbjct: 964 SPTTAEGTS-----IPTSTPSEGTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTST 1018
Query: 611 AISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQ 670
S +S+P ++ S T+ + TT +S + LS + +
Sbjct: 1019 EASSPPPTAEGTSMPTSTPSEGSTPLTR-MPVSTTMVASS-----ETSTLSTTPADTSTP 1072
Query: 671 TSNNNISTQHSCLSSQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPVDRI 730
+ + ++ S + S+ TS S+G+ + S P++ + + + + PVD
Sbjct: 1073 VTTYSQASSSSTTADGTSMPTST--YSEGSTPLTSV-PVSTRLVVSSEASTLSTTPVDTS 1129
Query: 731 DKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSLEISKDWQSET 790
+T++ + P + + P +E T P M P S + ++ T
Sbjct: 1130 IPVTTSTEASSSPTTAEGTSIPTSPPSEGT---TPLASM-------PVSTTLVVSSEANT 1179
Query: 791 IEYKDDQDMHALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSV 850
+ + + TA T S + +P E L P T P +
Sbjct: 1180 LSTTPVDSKTQVATSTEASSPPPTAEVT--SMPTSTPGERSTPLTSMPVRHT----PVAS 1233
Query: 851 SSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQ 910
S SP+ + +T T+ +P E ++ S ++ + P S L
Sbjct: 1234 SEASTLSTSPVDTSTPVTTSAETSS-SPTTAEGTSLPTSTTSEGSTLLTSIPVSTTLVTS 1292
Query: 911 KRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVE 970
S T K N T E + + +PL+ +P V LV
Sbjct: 1293 PEASTLLTTPVDTKGPVVTSNEVSSSPTPAEGTSMPTSTYSEGRTPLTSIP--VNTTLVA 1350
Query: 971 KTDDDVIGQAPAEASPP----------PIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSS 1020
+ ++ P + S P P + ++P S S + P S
Sbjct: 1351 SSAISILSTTPVDNSTPVTTSTEACSSPTTSEGTSMPNSNPSEGTTPLTSIPVSTTPVVS 1410
Query: 1021 SGPSPFALAVVKRSQ--SFSKERTESPSASALVQPPANT-EEGKTHSVNKFVDIPQLGVS 1077
S S + V S + S E T SP+ + + P +T EGKT P +
Sbjct: 1411 SEASTLSATPVDTSTPGTTSAEATSSPTTAEGISIPTSTPSEGKT---------PLKSIP 1461
Query: 1078 DKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQMRQSLLTAIRSGEAAAKLK 1137
A++E ++ TP D S V + T SS P + + E + L
Sbjct: 1462 VSNTPVANSEASTLSTTPVDSNSPVV----TSTAVSSSPTPAEGTSIAISTPSEGSTALT 1517
Query: 1138 RVTIPSNTISVNGRSRLS 1155
+ + + T++ + + LS
Sbjct: 1518 SIPVSTTTVASSEINSLS 1535
Score = 41.6 bits (96), Expect = 0.004
Identities = 64/325 (19%), Positives = 116/325 (35%), Gaps = 42/325 (12%)
Query: 846 VPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFA-PNLEEINNILESKFKSRASNAQAKPSS 904
+P + S ++P+ + +T T T P + P E ++L S ++ P S
Sbjct: 344 MPVATSEMSTLSITPVDTSTLVT--TSTEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVS 401
Query: 905 FFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSV 964
L S +K+ + A T E +P + +PL+ MP S
Sbjct: 402 TILVASSEASTTSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVST 461
Query: 965 PQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPS 1024
V + S P+ K + S ++ + T + P S G +
Sbjct: 462 ---------TPVASSEASNLSTTPVDSK-TQVTTSTEASSSPPTAEVNSMPTSTPSEGST 511
Query: 1025 PFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSA 1084
P S S S S AS L P +T T S + ++S+
Sbjct: 512 PLT------SMSVSTMPVASSEASTLSTTPVDTSTPVT-------------TSSEASSSS 552
Query: 1085 HNEQNSQIP--TPTDGP--------SFTVMRQSSLTFQSSDPEQMRQSLLTAIRSGEAAA 1134
+ + IP TP++G S ++ S + S+ P + T+ + ++
Sbjct: 553 TTPEGTSIPTSTPSEGSTPLTNMPVSTRLVVSSEASTTSTTPADSNTFVTTSSEASSSST 612
Query: 1135 KLKRVTIPSNTISVNGRSRLSHSMS 1159
+ ++P++T S G + S S+S
Sbjct: 613 TAEGTSMPTSTYSERGTTITSMSVS 637
Score = 40.4 bits (93), Expect = 0.010
Identities = 169/930 (18%), Positives = 307/930 (33%), Gaps = 106/930 (11%)
Query: 253 QTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQS--VPQDL 310
+ ++ ATP+ T + T S ++P+ P + PL +P S + +
Sbjct: 3180 EDSTLSATPVDTSTPVTTSTEATSSTTAEGTSIPTSTPSEGMTPLTSVPVSNTPVASSEA 3239
Query: 311 AHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLR----RTKRKAPS 366
+ + P + E SP A S+ S+ S G++ L T A S
Sbjct: 3240 SILSTTPVDSNTPLTTSTEASSSPPTA---EGTSMPTSTPSEGSTPLTSMPVSTTTVASS 3296
Query: 367 PPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKL 426
S + +D ++ VT PP + + S T L++ T P +
Sbjct: 3297 ETSTLSTTPADTSTPVTTYSQASSSPPIADGTSMPTSTYSEGST---PLTNMSFSTTPVV 3353
Query: 427 MEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKS----QD 482
E S TP T +T+ + S + + P +E +P +
Sbjct: 3354 SSEASTLST--TPVDTSTPVTTSTEASLSPTTAEGTSIPTSSP---SEGTTPLASMPVST 3408
Query: 483 IPFVSTDIINTLKNDP--DSALGNGSGEFSQNSM----EEKQETKSTDGQEPHSVV---- 532
P VS++ +NTL P + L S E S + + +++G P S++
Sbjct: 3409 TPVVSSE-VNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLST 3467
Query: 533 -------YDTSNGKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVE 585
T + V S S N E+ P +T + ++
Sbjct: 3468 TPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTTAEVTSMPTSTAGEGSTPLTNMPVSTT 3527
Query: 586 GVAKN-------NNIDMEVERPSNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTK 638
VA + +D S+S+A + + ++ S L T
Sbjct: 3528 PVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGSSSLTTMLLSSTY 3587
Query: 639 DAAIQ-TTPSCNSFD-------GKHQDHNLSDSKVEECVQTSNNNISTQHSCLSSQDSVN 690
+ + +TPS S D + + +V ++ + +ST + + +
Sbjct: 3588 VTSSEASTPSTPSVDRSTPVTTSTQSNSTPTPPEVITLPMSTPSEVSTPLTIMPVSTTSV 3647
Query: 691 TSREFRSQGTLIIHSEDPLTV-----KDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLY 745
T E + TL + + P+ P+ G P+ + ST PL
Sbjct: 3648 TISEAGTASTLPVDTSTPVITSTQVSSSPVTPEGT---TMPIWTPSEGST-------PLT 3697
Query: 746 RQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGKK 805
+ S+E + P + +T +++ S S T+ ++ LG
Sbjct: 3698 TMPVSTTRVTSSEGSTLSTPSVVTSTPVTTSTEAISSSATLDSTTMSVSMPMEISTLG-- 3755
Query: 806 HTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAP 865
T I + ++ PE P+ +PS +S S +P
Sbjct: 3756 --------TTILVSTTPVTRFPESSTPS------------IPSVYTSMSMTTASEGSSSP 3795
Query: 866 KMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKS 925
T T P + E + +L + S S +S S +TS A S
Sbjct: 3796 TTLEGTTTMPMSTTSER-STLLTTVLISPISVMSPSEASTLSTPPGDTSTPLLTSTKAGS 3854
Query: 926 VHAAPNPAPKELTN-KEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKT---DDDVIGQAP 981
P E+T + + +P TL + +P S P + T D
Sbjct: 3855 F-----SIPAEVTTIRISITSERSTPLTTLLVSTTLPTSFPGASIASTPPLDTSTTFTPS 3909
Query: 982 AEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFAL---AVVKRSQSFS 1038
+ + P P TI S ++ + F P +SS F AV + +
Sbjct: 3910 TDTASTPTIPVATTISVSVITEGSTPGTTIFIPSTPVTSSTADVFPATTGAVSTPVITST 3969
Query: 1039 KERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDG 1098
+ T S S+S+ + T+E T ++ + + +S + + T
Sbjct: 3970 ELNTPSTSSSSTTTSFSTTKEFTTPAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLS 4029
Query: 1099 PSFTVMRQSSLTFQSSDP--EQMRQSLLTA 1126
+ T +S+T + P E R S +T+
Sbjct: 4030 ATSTPHTSTSVTTRPVTPSSESSRPSTITS 4059
Score = 40.0 bits (92), Expect = 0.013
Identities = 73/343 (21%), Positives = 122/343 (35%), Gaps = 54/343 (15%)
Query: 830 PLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPA----PKMTRDTGTAPFAPNLEEINN 885
PLP+ + +L + + + +++ A SP P PK T G+ P + +
Sbjct: 168 PLPSFEAYTSLTYKVDMSTPLTTSTQASSSPTTPESTTIPKSTNSEGSTP-------LTS 220
Query: 886 ILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERD 945
+ S K +S A L +S SA A S +P A + A
Sbjct: 221 MPASTMKVASSEAIT-----LLTTPVEISTPVTISAQASS---SPTTAEGPSLSNSA--- 269
Query: 946 MLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPA----------EASPPPIAPKPVT 995
P +PL++MP SV LV ++ + PA EAS P + +
Sbjct: 270 ----PSGGSTPLTRMPLSVM--LVVSSEASTLSTTPAATNIPVITSTEASSSPTTAEGTS 323
Query: 996 IPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQ--SFSKERTESP-SASALVQ 1052
IP S + + T + P ++S S ++ V S + S E + P +A A
Sbjct: 324 IPTSTYTEGSTPLTSTPASTMPVATSEMSTLSITPVDTSTLVTTSTEPSSLPTTAEATSM 383
Query: 1053 PPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQ 1112
+ EG T N V + S+ S P D +F +
Sbjct: 384 LTSTLSEGSTPLTNMPVSTILVASSEASTTST---------IPVDSKTFVTTASEA---- 430
Query: 1113 SSDPEQMRQSLLTAIRSGEAAAKLKRVTIPSNTISVNGRSRLS 1155
SS P + + E + L + + + ++ + S LS
Sbjct: 431 SSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVASSEASNLS 473
Score = 39.7 bits (91), Expect = 0.017
Identities = 174/926 (18%), Positives = 298/926 (32%), Gaps = 144/926 (15%)
Query: 255 ASAPATPLVNKHRPTFTRSNTISKPYISN--TLPSDAPKKRRAPLPPMPASQSVPQDLAH 312
AS +T V+ P T + S P + ++P+ P + PL MP
Sbjct: 2768 ASTVSTTAVDTSIPVTTSTEASSSPTTAEVTSMPTSTPSETSTPLTSMP----------- 2816
Query: 313 IQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSK-- 370
V+ T + EAG LS+ S+ T KA S P+
Sbjct: 2817 --------------VNHTPVASSEAGT-------LSTTPVDTSTPVTTSTKASSSPTTAE 2855
Query: 371 ---IPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLM 427
+P + E S + PV P AS S + +T P +S E ++P
Sbjct: 2856 GIVVPISTASEGSTLLTSIPVSTTPV--ASSEASTLSTTPVDTSIPVTTSTEGSSSPTTA 2913
Query: 428 EETSVFECP-GTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFV 486
E TS+ P TP T LTS + S + E LS P ++ ++
Sbjct: 2914 EGTSM---PISTPSEVSTPLTSILVSTVPVAG-SEASTLSTTPVDTRTPVTTSAEASSSP 2969
Query: 487 STDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKKVVDSIR 546
+T ++ S ++M ST + P + + S
Sbjct: 2970 TTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTPVTTSTEASSSPT 3029
Query: 547 NLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAH 606
+ G P +T + ++ VA + ++
Sbjct: 3030 TAEGTG------------IPISTPSEGSTPLTSIPVSTTPVAIPEASTLSTTPVDSNSPV 3077
Query: 607 ETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVE 666
T T +S +S+P ++ S T + TTP +S LS + V+
Sbjct: 3078 VTSTEVSSSPTPAEGTSMPISTYSEGSTPLT-GVPVSTTPVTSSAIS-----TLSTTPVD 3131
Query: 667 ECVQTSNNNISTQHSCLSSQDSVNTSREFRSQGTLIIHSEDPLT---VKDPICAHGNDDL 723
+ + + HS ++ + + S+G+ PLT V + D
Sbjct: 3132 TSTPVTTS--TEAHSSPTTSEGTSMPTSTPSEGST------PLTYMPVSTMLVVSSEDST 3183
Query: 724 LP--PVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKSLE 781
L PVD +T++ + P PS GMT VP +
Sbjct: 3184 LSATPVDTSTPVTTSTEATSSTTAEGTSIPTSTPSE----------GMTPLTSVPVSNTP 3233
Query: 782 ISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLR 841
++ S D + T + T A S P ++
Sbjct: 3234 VASSEASILSTTPVDSN---------------TPLTTSTEASSSPPTAEGTSMPTS---- 3274
Query: 842 TEHQVPSSVSSPDDAM-VSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQA 900
PS S+P +M VS A T T P A + ++ ++ +
Sbjct: 3275 ----TPSEGSTPLTSMPVSTTTVASSETSTLSTTP-ADTSTPVTTYSQASSSPPIADGTS 3329
Query: 901 KPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKM 960
P+S + + ++ ++ S A+ T + + S E +LSP +
Sbjct: 3330 MPTSTYSEGSTPLTNMSFSTTPVVSSEAST----LSTTPVDTSTPVTTSTEASLSPTTAE 3385
Query: 961 PHSVPQPLVEKTDDDVIGQAPAEASP----PPIAPKPVTIPASQVSTQNLKTLKTFGAPR 1016
S+P T G P + P P ++ + T+ + V + L T T +
Sbjct: 3386 GTSIP------TSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEASSS 3439
Query: 1017 PYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGV 1076
P + G S S + E + S L P + E T S +
Sbjct: 3440 PTIAEGTS--------LPTSTTSEGSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVTT 3491
Query: 1077 SDKENNSAHNEQNSQIPTPTDGP----------SFTVMRQSSLTFQSSDPEQMRQSLLTA 1126
S N+S + + +PT T G S T + S + S+ P + ++
Sbjct: 3492 SSPTNSSPTTAEVTSMPTSTAGEGSTPLTNMPVSTTPVASSEASTLSTTPVDSNTFVTSS 3551
Query: 1127 IRSGEAAAKLKRVTIPSNTISVNGRS 1152
++ + A L+ T+ +T S S
Sbjct: 3552 SQASSSPATLQVTTMRMSTPSEGSSS 3577
Score = 35.8 bits (81), Expect = 0.24
Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 34/217 (15%)
Query: 255 ASAPATPLVNKHRPTFTRSNTISKPYISN--TLPSDAPKKRRAPLPPMPASQSVPQDLAH 312
AS +T V+ + P T + S P + ++ + RR PL MP S +V
Sbjct: 2119 ASTLSTTPVDSNSPVITSTEVSSSPIPTEGTSMQTSTYSDRRTPLTSMPVSTTV------ 2172
Query: 313 IQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIP 372
AS + ++S D S A S + S G S T + +P + +P
Sbjct: 2173 ----VASSAISTLSTTPVDTSTPVTNSTEARS--SPTTSEGTSMPTSTPSEGSTPFTSMP 2226
Query: 373 PHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETSV 432
+ PV V ++++ + +P + S+P T +S E ++P E TS+
Sbjct: 2227 ----------VSTMPV--VTSEASTLSATPVDTSTPVT-----TSTEATSSPTTAEGTSI 2269
Query: 433 FECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVP 469
T T LTS I ++L E LS P
Sbjct: 2270 --PTSTLSEGTTPLTS-IPVSHTLVANSEVSTLSTTP 2303
Score = 33.5 bits (75), Expect = 1.2
Identities = 62/327 (18%), Positives = 111/327 (33%), Gaps = 30/327 (9%)
Query: 845 QVPSSVSSPDDAMVSPLKPAPKMTRDTGT----APFAPNLEEINNILESKFKSRASNAQA 900
++P S + S L P T T A +P + ++ S + ++ +
Sbjct: 2342 RMPVSTTMVASFETSTLSTTPADTSTPVTTYSQAGSSPTTADDTSMPTSTYSEGSTPLTS 2401
Query: 901 KPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKM 960
P S + S H T + A T E P + +PL+ M
Sbjct: 2402 VPVSTMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASM 2461
Query: 961 PHSVPQPLVEK---------TDDDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKTLKT 1011
P S P+V D EAS P + + +P S S +
Sbjct: 2462 PVST-TPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVVPISTASEGSTLLTSI 2520
Query: 1012 FGAPRPYSSSGPSPFALAVVKRSQ---SFSKERTESPSASALVQPPANTEEGKTHSVNKF 1068
+ P +S S + V + + ++ + + SA P + EG T
Sbjct: 2521 PVSTTPVASPEASTLSTTPVDSNSPVVTSTEISSSATSAEGTSMPTSTYSEGST------ 2574
Query: 1069 VDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQMRQSLLTAIR 1128
+ + VS K A +E ++ TP D T + ++ T SS P + + +
Sbjct: 2575 -PLRSMPVSTKP--LASSEASTLSTTPVD----TSIPVTTSTETSSSPTTAKDTSMPIST 2627
Query: 1129 SGEAAAKLKRVTIPSNTISVNGRSRLS 1155
E + L + + + ++ + S LS
Sbjct: 2628 PSEVSTSLTSILVSTMPVASSEASTLS 2654
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 46.6 bits (109), Expect = 1e-04
Identities = 113/593 (19%), Positives = 196/593 (33%), Gaps = 64/593 (10%)
Query: 457 EEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEE 516
+++ E EE++E V +EN S S+ I +K+ +SA + + +
Sbjct: 105 KKVIESEEITEEHSV-SENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNK 163
Query: 517 KQETKSTDGQEPHSVVYDTSNGKKVVD----------SIRNLKSLGPNQENVQ--NEIIV 564
K TK +P VV + +G D + N S P + N
Sbjct: 164 KNRTKKKPTPKP-PVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPS 222
Query: 565 YPENTEDNMKNGV---KKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAISYKENHLAA 621
P N++ + + + K+T + + N + + A ET + LA
Sbjct: 223 LPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAP 282
Query: 622 SSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQHS 681
+S K P AE T TTP + + + + + S + +
Sbjct: 283 TSKVLAKPT-PKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPA 341
Query: 682 CLSSQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKN 741
+++ + T +E P T K+P + P K + K+
Sbjct: 342 PTTTKSAPTTPKE-----------PAPTTTKEPAPTTPKE----PAPTTTKEPAPTTTKS 386
Query: 742 YPLYRQDYNPKP--KPSNEITREYIPKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDM 799
P ++ P KP+ +E P TT K P + + E +
Sbjct: 387 APTTPKEPAPTTPKKPAPTTPKEPAP----TTPKEPTPTTPKEPAPTTKEPAPTTPKEPA 442
Query: 800 HALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSP-----D 854
KK KE A T + +EP P +P T P++ P
Sbjct: 443 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 502
Query: 855 DAMVSPLKPAPKMTRDTG-TAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRV 913
A +P +P+P T++ T P P + K A +P+
Sbjct: 503 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAP--------- 553
Query: 914 SGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTD 973
T A + P P + T + + P+ + L+P + P+ T
Sbjct: 554 ---TTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAP------TTPEKPAPTTP 604
Query: 974 DDVIGQAPAEASP-PPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSP 1025
+++ P E +P P P P T A+ +T T P P + P+P
Sbjct: 605 EELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 657
Score = 42.7 bits (99), Expect = 0.002
Identities = 95/495 (19%), Positives = 164/495 (33%), Gaps = 79/495 (15%)
Query: 656 QDHNLSDSKVEECVQTSNNNISTQHSCLSSQDSV---NTSREFRSQGTLIIHSEDPLTVK 712
++H++S+++ +S+++ ST SS++S ++ + + ++ T K
Sbjct: 115 EEHSVSENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPK 174
Query: 713 DPICAHGNDDL--------LPPVDRIDKNSTASYLKNYPLYRQDYNPKPK--PSNEITRE 762
P+ L P N ++ K + NP+P P+++ ++E
Sbjct: 175 PPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTA--KPINPRPSLPPNSDTSKE 232
Query: 763 YIPKIGMTTY---KIVPPKSLEISKDWQSETIEYKDDQDMHALGKKH------------- 806
+ T K + + S D + +T K+ Q + K
Sbjct: 233 TSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTP 292
Query: 807 -THENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAP 865
K A+ T +P+EP +P P+++ S A +P +PAP
Sbjct: 293 KAETTTKGPALTTPKEPTPTTPKEPASTTPKEP-------TPTTIKS---APTTPKEPAP 342
Query: 866 KMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKS 925
T+ T P P + K A +P+ T+ +A +
Sbjct: 343 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-------------TTTKSAPT 389
Query: 926 VHAAPNPA----PKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAP 981
P P P T KE P+P P P P P T + P
Sbjct: 390 TPKEPAPTTPKKPAPTTPKE------PAPTTPKEPTPTTPKE-PAP----TTKEPAPTTP 438
Query: 982 AEASP-PPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKE 1040
E +P P P P T +T T P P + P+P K + + +KE
Sbjct: 439 KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAP---TTTKSAPTTTKE 495
Query: 1041 RTESPSASALVQP----PANTEE-GKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTP 1095
+ + SA P P T+E T P+ A PT
Sbjct: 496 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTT 555
Query: 1096 TDGPSFTVMRQSSLT 1110
T P+ T ++ + T
Sbjct: 556 TKKPAPTTPKEPAPT 570
Score = 39.7 bits (91), Expect = 0.017
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 43/274 (15%)
Query: 251 RDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPK--KRRAPLPPMPASQSVPQ 308
++ + P P + PT T+ T S T AP K AP P + + P+
Sbjct: 677 KEPAPTTPKKPAPKELAPTTTKEPT------STTCDKPAPTTPKGTAPTTPKEPAPTTPK 730
Query: 309 DLAHIQERPASCIVKSMSVDETDKSPCE---AGRVRAGSLQLSSMSAGNSSLRRT----- 360
+ A + + T K P A G +S ++ + T
Sbjct: 731 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 790
Query: 361 --------KRKAPSPPSKIPPHQSDENSRVTALQPV------DGVPPDSASEA------N 400
K+ AP+ P PP S+ ++ T +P D P+ ++E N
Sbjct: 791 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 850
Query: 401 SPEELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEID 460
SP+E P T P + E T K ++T+ + TPE + T+
Sbjct: 851 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPE----TTTAAPKMTKETATTT 904
Query: 461 EKEELSEVPKVEAENISPKSQD-IPFVSTDIINT 493
EK S++ + S +QD PF T + T
Sbjct: 905 EKTTESKITATTTQVTSTTTQDTTPFKITTLKTT 938
Score = 38.9 bits (89), Expect = 0.029
Identities = 162/862 (18%), Positives = 284/862 (32%), Gaps = 115/862 (13%)
Query: 351 SAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPET 410
S + +++ T +++P PP+K + E+ +T V S+S ++S SS T
Sbjct: 82 SGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSENQESSSSSSSS----SSSST 137
Query: 411 FHPGLSSQEQCTAPKLMEETSVFE--------CPGTPEAAITSLTSGI-SSDYSLEEID- 460
SS+ +L ++ V + P + SG+ + D+ + D
Sbjct: 138 IRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDT 197
Query: 461 ---EKEELSEVPKV-EAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEE 516
+ ++S PK+ A+ I+P+ P T +L + ++ + E + +
Sbjct: 198 STTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTV-----ETKETTTTN 252
Query: 517 KQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNG 576
KQ STDG+E + +T + +K + K L P ++++ P + G
Sbjct: 253 KQ--TSTDGKEKTTSAKETQSIEKT-----SAKDLAPT-----SKVLAKPTPKAETTTKG 300
Query: 577 VKKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAI-----SYKENHLAASSVPDQKLNQ 631
T K E S + T T I + KE + +
Sbjct: 301 PALT------TPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKE 354
Query: 632 PSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQHSCLSSQDSVNT 691
P+ TK+ A T K + S + + + + T
Sbjct: 355 PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTT 414
Query: 692 SREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNP 751
+E T E T K+P + P K + K P P
Sbjct: 415 PKE----PTPTTPKEPAPTTKEPAPTTPKE----PAPTAPKKPAPTTPKE-PAPTTPKEP 465
Query: 752 KP----KPSNEITREYIP---KIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGK 804
P +PS +E P K TT K P + + + E + K
Sbjct: 466 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPK 525
Query: 805 KHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSV-------------- 850
+ K+ A T +P+EP P KP T + +
Sbjct: 526 EPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTP 585
Query: 851 SSPDD-AMVSPLKPAPKMTRD---------TGTAP----------FAPNLEEINNILESK 890
++P+ A +P KPAP + T T P APN + K
Sbjct: 586 TTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 645
Query: 891 FKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKEL--------TNKEA 942
+ + + P++ G T+ + PAPKEL T+
Sbjct: 646 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTC 705
Query: 943 ERDMLPSPEQTLSPLSKMPHSV----PQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPA 998
++ +P+ T K P P P K + PA +P APK +
Sbjct: 706 DKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTT 765
Query: 999 SQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTE 1058
++ T P+ + + P A K+ + E P ++ V P T+
Sbjct: 766 TKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPE--TPPPTTSEVSTPTTTK 823
Query: 1059 EGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQ 1118
E T + P+L ++ + +PT T P+ T + +T + D +
Sbjct: 824 EPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPT-TKTPAAT---KPEMTTTAKD-KT 878
Query: 1119 MRQSLLTAIRSGEAAAKLKRVT 1140
+ L T + AA K+ + T
Sbjct: 879 TERDLRTTPETTTAAPKMTKET 900
Score = 37.0 bits (84), Expect = 0.11
Identities = 53/262 (20%), Positives = 87/262 (33%), Gaps = 27/262 (10%)
Query: 807 THENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPK 866
T V E + I +SP+E P L +P + P P + KP
Sbjct: 812 TTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMT 871
Query: 867 MT-RDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKS 925
T +D T E K A+ + S +V+
Sbjct: 872 TTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFK 931
Query: 926 VHAAPNP--APKELTNKE--AERDMLPSPEQTLSPLSKMPHS---VPQPLVEKTDDDVIG 978
+ APK T K+ +++ PE+T P + +S P+P
Sbjct: 932 ITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKP----------- 980
Query: 979 QAPAEASPPPIA-PKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSF 1037
Q P +A P + KP T+P ++ KT PR +S+ P + + +
Sbjct: 981 QKPTKAPKKPTSTKKPKTMP-------RVRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQ 1033
Query: 1038 SKERTESPSASALVQPPANTEE 1059
+ R S LV+ +E+
Sbjct: 1034 TTTRPNQTPNSKLVEVNPKSED 1055
Score = 36.2 bits (82), Expect = 0.19
Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 6/196 (3%)
Query: 247 SKKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQSV 306
+K+ T PA K PT + + P P+ K +P P + +
Sbjct: 430 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP----KEPAPTTTKEPSPTTPKEPAPTT 485
Query: 307 PQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT-KRKAP 365
+ + PA KS + SP + + + + T K AP
Sbjct: 486 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 545
Query: 366 SPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPK 425
+ P + P + + + T +P P ++A ++PE P + T P+
Sbjct: 546 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPE 605
Query: 426 LMEETSVFE-CPGTPE 440
+ T+ E P TPE
Sbjct: 606 ELAPTTPEEPTPTTPE 621
Score = 35.8 bits (81), Expect = 0.24
Identities = 48/202 (23%), Positives = 73/202 (36%), Gaps = 10/202 (4%)
Query: 247 SKKKRDQTASAPATPLVNKHRPTFTR----SNTISKPYISNTLPSDAPKKRRAPLPPMPA 302
+K+ T PA P K PT T+ + T S P PS K AP P
Sbjct: 470 TKEPSPTTPKEPA-PTTTKSAPTTTKEPAPTTTKSAPTTPKE-PSPTTTKEPAPTTPKEP 527
Query: 303 SQSVPQDLAHIQER-PASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT- 360
+ + P+ A + PA K + T K + A + + L T
Sbjct: 528 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 587
Query: 361 -KRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQE 419
++ AP+ P K P +E + T +P P + A ++P+ P +
Sbjct: 588 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 647
Query: 420 QCTAPKLMEETSVFE-CPGTPE 440
T PK T+ E P TP+
Sbjct: 648 APTTPKEPAPTTPKETAPTTPK 669
Score = 35.8 bits (81), Expect = 0.24
Identities = 58/266 (21%), Positives = 94/266 (35%), Gaps = 37/266 (13%)
Query: 257 APATPLVNKHRPTFTRSNTISKPY--ISNTLPSDAPK--KRRAPLPPMPASQSVPQDLAH 312
AP TP + PT T + P T + AP K AP P + + P++ A
Sbjct: 600 APTTP--EELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 657
Query: 313 IQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIP 372
+ + + T K P + +L+ + + + AP+ P
Sbjct: 658 TTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTA 717
Query: 373 PHQSDENSRVTALQPVDGVPPDSA-----------SEANSPEELSSPETFHPGLSSQEQ- 420
P E + T +P P +A + +P+EL+ T P ++ ++
Sbjct: 718 PTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKP 777
Query: 421 -CTAPKLMEETSVFE---------CPGTPEAAITSLTSGISSDYSLEE--------IDEK 462
T PK T+ E P TPE TS +S+ + +E +
Sbjct: 778 APTTPKETAPTTPKEPAPTTPKKPAPTTPETP-PPTTSEVSTPTTTKEPTTIHKSPDEST 836
Query: 463 EELSEVPKVEAENISPKSQDIPFVST 488
ELS P +A SPK +P T
Sbjct: 837 PELSAEPTPKALENSPKEPGVPTTKT 862
Score = 30.8 bits (68), Expect = 7.9
Identities = 47/230 (20%), Positives = 76/230 (33%), Gaps = 28/230 (12%)
Query: 222 SCQISQNLDIMKEKENKGFFSFFQRSKKKRDQTASAPATPLVNKHRPTFTR--SNTISKP 279
S + +Q+++ K+ + K + T PA + PT + ++T K
Sbjct: 265 SAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKE 324
Query: 280 YISNTLPSDAPKKRRAPLPPMPASQ-SVPQDLAHIQERPASCIVKSMSVDETDKSPCEAG 338
T+ S AP + P P S + P++ A + + T K P
Sbjct: 325 PTPTTIKS-APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-- 381
Query: 339 RVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASE 398
+ S+ K AP+ P K P E + T +P P + A
Sbjct: 382 ------------TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 429
Query: 399 ANSPEELSSPETFHPGLSSQEQCTAPKLMEETSVFE-CPGTPEAAITSLT 447
P P + TAPK T+ E P TP+ + T
Sbjct: 430 TKEPA---------PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 470
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 46.6 bits (109), Expect = 1e-04
Identities = 113/593 (19%), Positives = 196/593 (33%), Gaps = 64/593 (10%)
Query: 457 EEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEE 516
+++ E EE++E V +EN S S+ I +K+ +SA + + +
Sbjct: 146 KKVIESEEITEEHSV-SENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNK 204
Query: 517 KQETKSTDGQEPHSVVYDTSNGKKVVD----------SIRNLKSLGPNQENVQ--NEIIV 564
K TK +P VV + +G D + N S P + N
Sbjct: 205 KNRTKKKPTPKP-PVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTAKPINPRPS 263
Query: 565 YPENTEDNMKNGV---KKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAISYKENHLAA 621
P N++ + + + K+T + + N + + A ET + LA
Sbjct: 264 LPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAP 323
Query: 622 SSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQHS 681
+S K P AE T TTP + + + + + S + +
Sbjct: 324 TSKVLAKPT-PKAETTTKGPALTTPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPA 382
Query: 682 CLSSQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKN 741
+++ + T +E P T K+P + P K + K+
Sbjct: 383 PTTTKSAPTTPKE-----------PAPTTTKEPAPTTPKE----PAPTTTKEPAPTTTKS 427
Query: 742 YPLYRQDYNPKP--KPSNEITREYIPKIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDM 799
P ++ P KP+ +E P TT K P + + E +
Sbjct: 428 APTTPKEPAPTTPKKPAPTTPKEPAP----TTPKEPTPTTPKEPAPTTKEPAPTTPKEPA 483
Query: 800 HALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSP-----D 854
KK KE A T + +EP P +P T P++ P
Sbjct: 484 PTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTK 543
Query: 855 DAMVSPLKPAPKMTRDTG-TAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRV 913
A +P +P+P T++ T P P + K A +P+
Sbjct: 544 SAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAP--------- 594
Query: 914 SGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTD 973
T A + P P + T + + P+ + L+P + P+ T
Sbjct: 595 ---TTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAP------TTPEKPAPTTP 645
Query: 974 DDVIGQAPAEASP-PPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSP 1025
+++ P E +P P P P T A+ +T T P P + P+P
Sbjct: 646 EELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 698
Score = 42.7 bits (99), Expect = 0.002
Identities = 95/495 (19%), Positives = 164/495 (33%), Gaps = 79/495 (15%)
Query: 656 QDHNLSDSKVEECVQTSNNNISTQHSCLSSQDSV---NTSREFRSQGTLIIHSEDPLTVK 712
++H++S+++ +S+++ ST SS++S ++ + + ++ T K
Sbjct: 156 EEHSVSENQESSSSSSSSSSSSTIRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPK 215
Query: 713 DPICAHGNDDL--------LPPVDRIDKNSTASYLKNYPLYRQDYNPKPK--PSNEITRE 762
P+ L P N ++ K + NP+P P+++ ++E
Sbjct: 216 PPVVDEAGSGLDNGDFKVTTPDTSTTQHNKVSTSPKITTA--KPINPRPSLPPNSDTSKE 273
Query: 763 YIPKIGMTTY---KIVPPKSLEISKDWQSETIEYKDDQDMHALGKKH------------- 806
+ T K + + S D + +T K+ Q + K
Sbjct: 274 TSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSAKDLAPTSKVLAKPTP 333
Query: 807 -THENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAP 865
K A+ T +P+EP +P P+++ S A +P +PAP
Sbjct: 334 KAETTTKGPALTTPKEPTPTTPKEPASTTPKEP-------TPTTIKS---APTTPKEPAP 383
Query: 866 KMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKS 925
T+ T P P + K A +P+ T+ +A +
Sbjct: 384 TTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-------------TTTKSAPT 430
Query: 926 VHAAPNPA----PKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAP 981
P P P T KE P+P P P P P T + P
Sbjct: 431 TPKEPAPTTPKKPAPTTPKE------PAPTTPKEPTPTTPKE-PAP----TTKEPAPTTP 479
Query: 982 AEASP-PPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKE 1040
E +P P P P T +T T P P + P+P K + + +KE
Sbjct: 480 KEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAP---TTTKSAPTTTKE 536
Query: 1041 RTESPSASALVQP----PANTEE-GKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTP 1095
+ + SA P P T+E T P+ A PT
Sbjct: 537 PAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPAPTT 596
Query: 1096 TDGPSFTVMRQSSLT 1110
T P+ T ++ + T
Sbjct: 597 TKKPAPTTPKEPAPT 611
Score = 39.7 bits (91), Expect = 0.017
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 43/274 (15%)
Query: 251 RDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPK--KRRAPLPPMPASQSVPQ 308
++ + P P + PT T+ T S T AP K AP P + + P+
Sbjct: 718 KEPAPTTPKKPAPKELAPTTTKEPT------STTCDKPAPTTPKGTAPTTPKEPAPTTPK 771
Query: 309 DLAHIQERPASCIVKSMSVDETDKSPCE---AGRVRAGSLQLSSMSAGNSSLRRT----- 360
+ A + + T K P A G +S ++ + T
Sbjct: 772 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 831
Query: 361 --------KRKAPSPPSKIPPHQSDENSRVTALQPV------DGVPPDSASEA------N 400
K+ AP+ P PP S+ ++ T +P D P+ ++E N
Sbjct: 832 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 891
Query: 401 SPEELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEID 460
SP+E P T P + E T K ++T+ + TPE + T+
Sbjct: 892 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPE----TTTAAPKMTKETATTT 945
Query: 461 EKEELSEVPKVEAENISPKSQD-IPFVSTDIINT 493
EK S++ + S +QD PF T + T
Sbjct: 946 EKTTESKITATTTQVTSTTTQDTTPFKITTLKTT 979
Score = 38.9 bits (89), Expect = 0.029
Identities = 162/862 (18%), Positives = 284/862 (32%), Gaps = 115/862 (13%)
Query: 351 SAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPET 410
S + +++ T +++P PP+K + E+ +T V S+S ++S SS T
Sbjct: 123 SGASQTIKSTTKRSPKPPNKKKTKKVIESEEITEEHSVSENQESSSSSSSS----SSSST 178
Query: 411 FHPGLSSQEQCTAPKLMEETSVFE--------CPGTPEAAITSLTSGI-SSDYSLEEID- 460
SS+ +L ++ V + P + SG+ + D+ + D
Sbjct: 179 IRKIKSSKNSAANRELQKKLKVKDNKKNRTKKKPTPKPPVVDEAGSGLDNGDFKVTTPDT 238
Query: 461 ---EKEELSEVPKV-EAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEE 516
+ ++S PK+ A+ I+P+ P T +L + ++ + E + +
Sbjct: 239 STTQHNKVSTSPKITTAKPINPRPSLPPNSDTSKETSLTVNKETTV-----ETKETTTTN 293
Query: 517 KQETKSTDGQEPHSVVYDTSNGKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNG 576
KQ STDG+E + +T + +K + K L P ++++ P + G
Sbjct: 294 KQ--TSTDGKEKTTSAKETQSIEKT-----SAKDLAPT-----SKVLAKPTPKAETTTKG 341
Query: 577 VKKTEINVEGVAKNNNIDMEVERPSNSEAHETDTAI-----SYKENHLAASSVPDQKLNQ 631
T K E S + T T I + KE + +
Sbjct: 342 PALT------TPKEPTPTTPKEPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKE 395
Query: 632 PSAEKTKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNISTQHSCLSSQDSVNT 691
P+ TK+ A T K + S + + + + T
Sbjct: 396 PAPTTTKEPAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTT 455
Query: 692 SREFRSQGTLIIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNP 751
+E T E T K+P + P K + K P P
Sbjct: 456 PKE----PTPTTPKEPAPTTKEPAPTTPKE----PAPTAPKKPAPTTPKE-PAPTTPKEP 506
Query: 752 KP----KPSNEITREYIP---KIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGK 804
P +PS +E P K TT K P + + + E + K
Sbjct: 507 APTTTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPK 566
Query: 805 KHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSV-------------- 850
+ K+ A T +P+EP P KP T + +
Sbjct: 567 EPAPTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTP 626
Query: 851 SSPDD-AMVSPLKPAPKMTRD---------TGTAP----------FAPNLEEINNILESK 890
++P+ A +P KPAP + T T P APN + K
Sbjct: 627 TTPEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPK 686
Query: 891 FKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKEL--------TNKEA 942
+ + + P++ G T+ + PAPKEL T+
Sbjct: 687 EPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTC 746
Query: 943 ERDMLPSPEQTLSPLSKMPHSV----PQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPA 998
++ +P+ T K P P P K + PA +P APK +
Sbjct: 747 DKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTT 806
Query: 999 SQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTE 1058
++ T P+ + + P A K+ + E P ++ V P T+
Sbjct: 807 TKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPE--TPPPTTSEVSTPTTTK 864
Query: 1059 EGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQ 1118
E T + P+L ++ + +PT T P+ T + +T + D +
Sbjct: 865 EPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPT-TKTPAAT---KPEMTTTAKD-KT 919
Query: 1119 MRQSLLTAIRSGEAAAKLKRVT 1140
+ L T + AA K+ + T
Sbjct: 920 TERDLRTTPETTTAAPKMTKET 941
Score = 37.0 bits (84), Expect = 0.11
Identities = 53/262 (20%), Positives = 87/262 (33%), Gaps = 27/262 (10%)
Query: 807 THENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPK 866
T V E + I +SP+E P L +P + P P + KP
Sbjct: 853 TTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMT 912
Query: 867 MT-RDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKS 925
T +D T E K A+ + S +V+
Sbjct: 913 TTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFK 972
Query: 926 VHAAPNP--APKELTNKE--AERDMLPSPEQTLSPLSKMPHS---VPQPLVEKTDDDVIG 978
+ APK T K+ +++ PE+T P + +S P+P
Sbjct: 973 ITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKP----------- 1021
Query: 979 QAPAEASPPPIA-PKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSF 1037
Q P +A P + KP T+P ++ KT PR +S+ P + + +
Sbjct: 1022 QKPTKAPKKPTSTKKPKTMP-------RVRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQ 1074
Query: 1038 SKERTESPSASALVQPPANTEE 1059
+ R S LV+ +E+
Sbjct: 1075 TTTRPNQTPNSKLVEVNPKSED 1096
Score = 36.2 bits (82), Expect = 0.19
Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 6/196 (3%)
Query: 247 SKKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQSV 306
+K+ T PA K PT + + P P+ K +P P + +
Sbjct: 471 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP----KEPAPTTTKEPSPTTPKEPAPTT 526
Query: 307 PQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT-KRKAP 365
+ + PA KS + SP + + + + T K AP
Sbjct: 527 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 586
Query: 366 SPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPK 425
+ P + P + + + T +P P ++A ++PE P + T P+
Sbjct: 587 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPE 646
Query: 426 LMEETSVFE-CPGTPE 440
+ T+ E P TPE
Sbjct: 647 ELAPTTPEEPTPTTPE 662
Score = 35.8 bits (81), Expect = 0.24
Identities = 48/202 (23%), Positives = 73/202 (36%), Gaps = 10/202 (4%)
Query: 247 SKKKRDQTASAPATPLVNKHRPTFTR----SNTISKPYISNTLPSDAPKKRRAPLPPMPA 302
+K+ T PA P K PT T+ + T S P PS K AP P
Sbjct: 511 TKEPSPTTPKEPA-PTTTKSAPTTTKEPAPTTTKSAPTTPKE-PSPTTTKEPAPTTPKEP 568
Query: 303 SQSVPQDLAHIQER-PASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT- 360
+ + P+ A + PA K + T K + A + + L T
Sbjct: 569 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 628
Query: 361 -KRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQE 419
++ AP+ P K P +E + T +P P + A ++P+ P +
Sbjct: 629 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 688
Query: 420 QCTAPKLMEETSVFE-CPGTPE 440
T PK T+ E P TP+
Sbjct: 689 APTTPKEPAPTTPKETAPTTPK 710
Score = 35.8 bits (81), Expect = 0.24
Identities = 58/266 (21%), Positives = 94/266 (35%), Gaps = 37/266 (13%)
Query: 257 APATPLVNKHRPTFTRSNTISKPY--ISNTLPSDAPK--KRRAPLPPMPASQSVPQDLAH 312
AP TP + PT T + P T + AP K AP P + + P++ A
Sbjct: 641 APTTP--EELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 698
Query: 313 IQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIP 372
+ + + T K P + +L+ + + + AP+ P
Sbjct: 699 TTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTA 758
Query: 373 PHQSDENSRVTALQPVDGVPPDSA-----------SEANSPEELSSPETFHPGLSSQEQ- 420
P E + T +P P +A + +P+EL+ T P ++ ++
Sbjct: 759 PTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKP 818
Query: 421 -CTAPKLMEETSVFE---------CPGTPEAAITSLTSGISSDYSLEE--------IDEK 462
T PK T+ E P TPE TS +S+ + +E +
Sbjct: 819 APTTPKETAPTTPKEPAPTTPKKPAPTTPETP-PPTTSEVSTPTTTKEPTTIHKSPDEST 877
Query: 463 EELSEVPKVEAENISPKSQDIPFVST 488
ELS P +A SPK +P T
Sbjct: 878 PELSAEPTPKALENSPKEPGVPTTKT 903
Score = 30.8 bits (68), Expect = 7.9
Identities = 47/230 (20%), Positives = 76/230 (33%), Gaps = 28/230 (12%)
Query: 222 SCQISQNLDIMKEKENKGFFSFFQRSKKKRDQTASAPATPLVNKHRPTFTR--SNTISKP 279
S + +Q+++ K+ + K + T PA + PT + ++T K
Sbjct: 306 SAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKE 365
Query: 280 YISNTLPSDAPKKRRAPLPPMPASQ-SVPQDLAHIQERPASCIVKSMSVDETDKSPCEAG 338
T+ S AP + P P S + P++ A + + T K P
Sbjct: 366 PTPTTIKS-APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-- 422
Query: 339 RVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASE 398
+ S+ K AP+ P K P E + T +P P + A
Sbjct: 423 ------------TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 470
Query: 399 ANSPEELSSPETFHPGLSSQEQCTAPKLMEETSVFE-CPGTPEAAITSLT 447
P P + TAPK T+ E P TP+ + T
Sbjct: 471 TKEPA---------PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 511
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 45.1 bits (105), Expect = 4e-04
Identities = 94/460 (20%), Positives = 164/460 (35%), Gaps = 55/460 (11%)
Query: 248 KKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPK--KRRAPLPPMPASQS 305
K + Q +A A P K + + S++ +P N P P K + PP PA ++
Sbjct: 148 KGVKPQAKAAKAPPKKAKSSDSDSDSSSEDEPP-KNQKPKITPVTVKAQTKAPPKPA-RA 205
Query: 306 VPQDLAHIQERPASCIVKSMSVDETD-------------------KSPCEAGRV--RAGS 344
P+ +S S S D+++ K+P +A R S
Sbjct: 206 APKIANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSS 265
Query: 345 LQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEE 404
S S ++ + P P S +PP + + QP P A E P E
Sbjct: 266 SSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQP-----PKKAVEKQQPVE 320
Query: 405 LSSPETFHPGLSSQEQCTAP-KLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKE 463
S + SS+E+ P K + + + P +AA + SSD S + E +
Sbjct: 321 SSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAES------SSDSSDSDSSEDD 374
Query: 464 ELSEVPKVEAENISPKSQDIPFVSTDIINTL-KNDPDSALGNGSGEFSQ--NSMEEKQET 520
E P +N S K P V+T P +G G ++ +S ++E+
Sbjct: 375 EAPSKPAGTTKNSSNK----PAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEES 430
Query: 521 KSTDGQEPHSVVYDT---SNGKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGV 577
S++ ++ +V T + K + G + ++ E E K+ V
Sbjct: 431 SSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAV 490
Query: 578 KKTEINVE-GVAKNNNIDMEVERPSNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEK 636
KK V G A + + + +S + +D + +E L P +P A K
Sbjct: 491 KKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSP-----RPQAPK 545
Query: 637 TKDAAIQTTPSCNSFDGKHQDHNLSDSKVEECVQTSNNNI 676
+ T N K+ + + K V + + ++
Sbjct: 546 ANGTSALTAQ--NGKAAKNSEEEEEEKKKAAVVVSKSGSL 583
Score = 42.4 bits (98), Expect = 0.003
Identities = 61/319 (19%), Positives = 114/319 (35%), Gaps = 10/319 (3%)
Query: 818 TEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFA 877
+EDS+ E E+ P +K KP + PS+ P K A + + ++ +
Sbjct: 267 SEDSSSDEEEEQKKP-MKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDS 325
Query: 878 PNLEEINNILESKFKSRA--SNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPK 935
+ + ++ E K ++A S A KP + S+ + P K
Sbjct: 326 SDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTK 385
Query: 936 ELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPVT 995
+NK A P+ + +P K P Q L+ + D + + +S K V
Sbjct: 386 NSSNKPAVTTKSPAVKPAAAP--KQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVA 443
Query: 996 IPASQVSTQNLKTLKTFGAPR----PYSSSGPSPFALAVVKRSQSFSKERTESPSASALV 1051
+ + + +L AP+ S S S K S+S K++ + + A
Sbjct: 444 TTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAP 503
Query: 1052 QPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTF 1111
PA+ ++GK S N ++E Q P + T +
Sbjct: 504 SKPASAKKGKAESSNS-SSSDDSSEEEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKN 562
Query: 1112 QSSDPEQMRQSLLTAIRSG 1130
+ E+ +++ + +SG
Sbjct: 563 SEEEEEEKKKAAVVVSKSG 581
>gi|55953110 retinoblastoma protein-binding zinc finger protein
isoform c [Homo sapiens]
Length = 1481
Score = 45.1 bits (105), Expect = 4e-04
Identities = 69/296 (23%), Positives = 109/296 (36%), Gaps = 36/296 (12%)
Query: 804 KKHTHEN----VKET-AIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMV 858
KKH ++ KE+ ++Q SA+ + +P + K L + + V +P D
Sbjct: 653 KKHCSDSEGKEFKESHSVQPTCSAVKK--RKPTTCMLQKVLLNEYNGIDLPVENPADGTR 710
Query: 859 SP-----LKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRV 913
SP L+ P G+ AP +E ++ PSS LQ
Sbjct: 711 SPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVC--------------PSSPALQTPSLS 756
Query: 914 SGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTD 973
SG + + ++P P P LT +LP+ S PH P PL T
Sbjct: 757 SGQ-LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNAT- 814
Query: 974 DDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKR 1033
Q+P P ++P P IP + L + + G P SSS S + +
Sbjct: 815 ----AQSPLPILSPTVSPSPSPIP----PVEPLMSAASPGPPTLSSSSSSSSSSSSFSSS 866
Query: 1034 SQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQN 1089
S S S + S++V N E K ++ G+ +E + EQ+
Sbjct: 867 SSSSSPSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQD 922
Score = 30.8 bits (68), Expect = 7.9
Identities = 46/213 (21%), Positives = 72/213 (33%), Gaps = 11/213 (5%)
Query: 931 NPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIA 990
+P+P + + + D+ P + P P +T GQ P P +
Sbjct: 711 SPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPS 770
Query: 991 PKPVTIPASQVSTQNLKTLKTFGAPRPYSSSG----PSPFALAVVKRSQSFSKERTESPS 1046
P P V+T L T P P SS+ PSP + A + T SPS
Sbjct: 771 SPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSP-TVSPS 829
Query: 1047 ASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMR- 1105
S + PP + S + S+ + +S P P S V
Sbjct: 830 PSPI--PPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSG 887
Query: 1106 ---QSSLTFQSSDPEQMRQSLLTAIRSGEAAAK 1135
++SL S E++ L ++AA+
Sbjct: 888 DNLEASLPMISFKQEELENEGLKPREEPQSAAE 920
>gi|20336260 retinoblastoma protein-binding zinc finger protein
isoform b [Homo sapiens]
Length = 1682
Score = 45.1 bits (105), Expect = 4e-04
Identities = 69/296 (23%), Positives = 109/296 (36%), Gaps = 36/296 (12%)
Query: 804 KKHTHEN----VKET-AIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMV 858
KKH ++ KE+ ++Q SA+ + +P + K L + + V +P D
Sbjct: 854 KKHCSDSEGKEFKESHSVQPTCSAVKK--RKPTTCMLQKVLLNEYNGIDLPVENPADGTR 911
Query: 859 SP-----LKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRV 913
SP L+ P G+ AP +E ++ PSS LQ
Sbjct: 912 SPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVC--------------PSSPALQTPSLS 957
Query: 914 SGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTD 973
SG + + ++P P P LT +LP+ S PH P PL T
Sbjct: 958 SGQ-LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNAT- 1015
Query: 974 DDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKR 1033
Q+P P ++P P IP + L + + G P SSS S + +
Sbjct: 1016 ----AQSPLPILSPTVSPSPSPIP----PVEPLMSAASPGPPTLSSSSSSSSSSSSFSSS 1067
Query: 1034 SQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQN 1089
S S S + S++V N E K ++ G+ +E + EQ+
Sbjct: 1068 SSSSSPSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQD 1123
Score = 30.8 bits (68), Expect = 7.9
Identities = 46/213 (21%), Positives = 72/213 (33%), Gaps = 11/213 (5%)
Query: 931 NPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIA 990
+P+P + + + D+ P + P P +T GQ P P +
Sbjct: 912 SPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPS 971
Query: 991 PKPVTIPASQVSTQNLKTLKTFGAPRPYSSSG----PSPFALAVVKRSQSFSKERTESPS 1046
P P V+T L T P P SS+ PSP + A + T SPS
Sbjct: 972 SPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSP-TVSPS 1030
Query: 1047 ASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMR- 1105
S + PP + S + S+ + +S P P S V
Sbjct: 1031 PSPI--PPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSG 1088
Query: 1106 ---QSSLTFQSSDPEQMRQSLLTAIRSGEAAAK 1135
++SL S E++ L ++AA+
Sbjct: 1089 DNLEASLPMISFKQEELENEGLKPREEPQSAAE 1121
>gi|20336258 retinoblastoma protein-binding zinc finger protein
isoform a [Homo sapiens]
Length = 1718
Score = 45.1 bits (105), Expect = 4e-04
Identities = 69/296 (23%), Positives = 109/296 (36%), Gaps = 36/296 (12%)
Query: 804 KKHTHEN----VKET-AIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMV 858
KKH ++ KE+ ++Q SA+ + +P + K L + + V +P D
Sbjct: 854 KKHCSDSEGKEFKESHSVQPTCSAVKK--RKPTTCMLQKVLLNEYNGIDLPVENPADGTR 911
Query: 859 SP-----LKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRV 913
SP L+ P G+ AP +E ++ PSS LQ
Sbjct: 912 SPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVC--------------PSSPALQTPSLS 957
Query: 914 SGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTD 973
SG + + ++P P P LT +LP+ S PH P PL T
Sbjct: 958 SGQ-LPPLLIPTDPSSPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNAT- 1015
Query: 974 DDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKR 1033
Q+P P ++P P IP + L + + G P SSS S + +
Sbjct: 1016 ----AQSPLPILSPTVSPSPSPIP----PVEPLMSAASPGPPTLSSSSSSSSSSSSFSSS 1067
Query: 1034 SQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQN 1089
S S S + S++V N E K ++ G+ +E + EQ+
Sbjct: 1068 SSSSSPSPPPLSAISSVVSSGDNLEASLPMISFKQEELENEGLKPREEPQSAAEQD 1123
Score = 30.8 bits (68), Expect = 7.9
Identities = 46/213 (21%), Positives = 72/213 (33%), Gaps = 11/213 (5%)
Query: 931 NPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIA 990
+P+P + + + D+ P + P P +T GQ P P +
Sbjct: 912 SPSPCKSLEAQPDPDLGPGSGFPAPTVESTPDVCPSSPALQTPSLSSGQLPPLLIPTDPS 971
Query: 991 PKPVTIPASQVSTQNLKTLKTFGAPRPYSSSG----PSPFALAVVKRSQSFSKERTESPS 1046
P P V+T L T P P SS+ PSP + A + T SPS
Sbjct: 972 SPPPCPPVLTVATPPPPLLPTVPLPAPSSSASPHPCPSPLSNATAQSPLPILSP-TVSPS 1030
Query: 1047 ASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMR- 1105
S + PP + S + S+ + +S P P S V
Sbjct: 1031 PSPI--PPVEPLMSAASPGPPTLSSSSSSSSSSSSFSSSSSSSSPSPPPLSAISSVVSSG 1088
Query: 1106 ---QSSLTFQSSDPEQMRQSLLTAIRSGEAAAK 1135
++SL S E++ L ++AA+
Sbjct: 1089 DNLEASLPMISFKQEELENEGLKPREEPQSAAE 1121
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 44.7 bits (104), Expect = 5e-04
Identities = 63/311 (20%), Positives = 110/311 (35%), Gaps = 22/311 (7%)
Query: 794 KDDQDMHALGKKHTHENVKETA-IQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSS 852
K++ A K E K A +++ + A S + EE K K + E + P S
Sbjct: 609 KEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKS 668
Query: 853 PDDAMVSPLKPAPKMTRDTGTAPF---APNLEEINNILESK--FKSRASNAQAKPSSFFL 907
P A + A + +P +P EE + ++K K A + + S
Sbjct: 669 PVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKE 728
Query: 908 QMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQP 967
+ + AKS A +P + + ++ P+ E+ SP K P P
Sbjct: 729 EAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSP 788
Query: 968 LVEKTDDDVIGQAPAE---ASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPS 1024
+ E+ ++P + +P PK + + + + +K P+
Sbjct: 789 VKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPK----KAEE 844
Query: 1025 PFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSA 1084
A A K + ++ E+P A P EE K +V K + S E
Sbjct: 845 EKAPATPKTEEKKDSKKEEAPKKEA---PKPKVEEKKEPAVEKPKE------SKVEAKKE 895
Query: 1085 HNEQNSQIPTP 1095
E ++PTP
Sbjct: 896 EAEDKKKVPTP 906
Score = 39.3 bits (90), Expect = 0.022
Identities = 58/261 (22%), Positives = 95/261 (36%), Gaps = 23/261 (8%)
Query: 888 ESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERDML 947
E + KS + A P + + V + A AKS +P E+ K E+
Sbjct: 498 EEETKSPPAEEAASPEK---EAKSPVKEEAKSPAEAKSPEKEEAKSPAEV--KSPEKAKS 552
Query: 948 PSPEQTLSPL---------SKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPV---- 994
P+ E+ SP +K P V P K+ ++PAEA P A PV
Sbjct: 553 PAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEA 612
Query: 995 TIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERTESP-SASALVQP 1053
PA S + P + P+ ++++S KE +SP A + V+
Sbjct: 613 KSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKA 672
Query: 1054 PANTEEGKTHSVNKFVDIPQLGVSD-KENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQ 1112
A + E V P+ S KE + + S + P +S + +
Sbjct: 673 EAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPE---KAKSPVKEE 729
Query: 1113 SSDPEQMRQSLLTAIRSGEAA 1133
+ PE+ + + +S E A
Sbjct: 730 AKTPEKAKSPVKEEAKSPEKA 750
Score = 33.9 bits (76), Expect = 0.93
Identities = 95/509 (18%), Positives = 166/509 (32%), Gaps = 85/509 (16%)
Query: 361 KRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQ 420
K +A SP P + + S P P + EA SP E SPE +E+
Sbjct: 521 KEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSP-AKEEAKSPPEAKSPE--------KEE 571
Query: 421 CTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKEELSEVPKVEAENISPKS 480
+P ++ + P EA + S + + K V+ E SP
Sbjct: 572 AKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAE 631
Query: 481 QDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDTSNGKK 540
P + P+ A EK+E KS + + V + + +K
Sbjct: 632 VKSPEKAKSPTKEEAKSPEKA-----------KSPEKEEAKSPE-KAKSPVKAEAKSPEK 679
Query: 541 VVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERP 600
++ ++ E PE + +K K E V + + + P
Sbjct: 680 AKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSP 739
Query: 601 SNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHNL 660
EA + A S ++ P+ K P+ E+ + A + F K
Sbjct: 740 VKEEAKSPEKAKSPEKAKTLDVKSPEAK--TPAKEEARSPA-------DKFPEK------ 784
Query: 661 SDSKVEECVQTSNNNIS-TQHSCLSSQDSVNTSREFRSQGTLIIHSEDPLTVKDPICAHG 719
+ S V+E V++ S + + + + E +S + E P VK
Sbjct: 785 AKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSP---VKEEEKPQEVKVK----- 836
Query: 720 NDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIPKIGMTTYKIVPPKS 779
PP ++ + A+ PK + + +E PK K+ K
Sbjct: 837 ----EPPKKAEEEKAPAT-------------PKTEEKKDSKKEEAPKKEAPKPKVEEKKE 879
Query: 780 LEISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISESPEEPLP-NLKPKP 838
+ K +S+ K+ + ED +PE+ P ++ K
Sbjct: 880 PAVEKPKESKVEAKKE---------------------EAEDKKKVPTPEKEAPAKVEVKE 918
Query: 839 NLRTEHQVPSSVSSPDDAMV-SPLKPAPK 866
+ + + + + PDDA P KPA K
Sbjct: 919 DAKPKEKTEVAKKEPDDAKAKEPSKPAEK 947
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 44.3 bits (103), Expect = 7e-04
Identities = 51/216 (23%), Positives = 80/216 (37%), Gaps = 29/216 (13%)
Query: 827 PEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGT--APFAPNLEEIN 884
PE P P KP + +H P + SP ++ +KP + TR G+ AP AP E+
Sbjct: 1043 PEAPAPPQKPLNSQSQKHLAPPPLLSP---LLPSIKPTVRKTRQDGSQEAPEAPLSSELE 1099
Query: 885 NI-LESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAE 943
+ K ++R S+ F H TS A + A + TN+ +
Sbjct: 1100 PFHPKPKIRTRKSSRMTP----FPATSAAPEPHPSTSTAQPVTPKPTSQATRSRTNRSSV 1155
Query: 944 RDMLPSPEQTLSPLSKMPHSVPQPLVE----------------KTDDDVIGQAPAEASPP 987
+ P P +P + S QP+ KT + V+ A E P
Sbjct: 1156 K--TPEPVVPTAPELQPSTSTDQPVTSEPTSQVTRGRKSRSSVKTPETVVPTA-LELQPS 1212
Query: 988 PIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGP 1023
+PVT + +T+ K + P P + P
Sbjct: 1213 TSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAP 1248
Score = 36.6 bits (83), Expect = 0.14
Identities = 50/222 (22%), Positives = 78/222 (35%), Gaps = 13/222 (5%)
Query: 810 NVKETAIQTEDSAISESPEEPLPN----LKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAP 865
++K T +T E+PE PL + PKP +RT SS +P A + +P P
Sbjct: 1073 SIKPTVRKTRQDGSQEAPEAPLSSELEPFHPKPKIRTR---KSSRMTPFPATSAAPEPHP 1129
Query: 866 KMTRDTGTAPFAPNLEEINNILESKFKSR----ASNAQAKPSSFFLQMQKRVSGHYVTSA 921
+ P + + S K+ + + +PS+ Q VT
Sbjct: 1130 STSTAQPVTPKPTSQATRSRTNRSSVKTPEPVVPTAPELQPSTSTDQPVTSEPTSQVT-R 1188
Query: 922 AAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAP 981
KS + P T E + T P S+ KT + V+ AP
Sbjct: 1189 GRKSRSSVKTPETVVPTALELQPSTSTDRPVTSEPTSQATRGRKNRSSVKTPEPVVPTAP 1248
Query: 982 AEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGP 1023
E P +PVT + +T+ K + P P + P
Sbjct: 1249 -ELQPSTSTDQPVTSEPTYQATRGRKNRSSVKTPEPVVPTAP 1289
>gi|239508790 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 490
Score = 43.9 bits (102), Expect = 9e-04
Identities = 55/235 (23%), Positives = 85/235 (36%), Gaps = 42/235 (17%)
Query: 273 SNTISKPYISNTLPSDAPKKRRAPLPPMPASQSVPQDLAHIQERPASCIVKSMSVDETDK 332
S+ S P +LPSD P P PP VP L+ + P+ S
Sbjct: 222 SDVPSPPSDVPSLPSDVPSLSGVPSPP----SDVPSLLSGVPSPPSDISPPSDVPSLLSD 277
Query: 333 SPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVP 392
P V + LS + + S + PSPPS +P SD + + GVP
Sbjct: 278 VPSLPSDVPS---LLSGVPSPPSDVPSLLSDVPSPPSDVPSPPSD-------IPLLSGVP 327
Query: 393 PDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSG--- 449
+ + P ++ SP + P LS P + + + +P + + SL
Sbjct: 328 SPPSDVPSPPSDVPSPPSDVPLLSG-----VPSPLSDVPLLSGVPSPPSDVPSLLMSPHR 382
Query: 450 -ISSDYSLEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALG 503
+ S YSL +SP D+P + +D+ + L P S G
Sbjct: 383 LLMSHYSL-------------------VSPHRLDVPSLLSDVPSLLSGVPSSPSG 418
Score = 38.9 bits (89), Expect = 0.029
Identities = 62/255 (24%), Positives = 96/255 (37%), Gaps = 33/255 (12%)
Query: 257 APATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQSVPQ-----DLA 311
+P PLV+ H P + P+ S P +P PL S P L
Sbjct: 59 SPHFPLVSPHHP-------LMSPHYSLVSPQYSPVSPHCPLVSPHYSLVSPHRPLVSPLL 111
Query: 312 HIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKI 371
P S + +S + S + SL LS + + S + PSPPS +
Sbjct: 112 SGVPSPPSDVPSLLSGVPSLPSDVSSPPSDVPSL-LSDVPSLLSGVPSPPSDVPSPPSDV 170
Query: 372 PPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPKLMEETS 431
P SD S ++ GVP + + P ++ SP + P LS P +
Sbjct: 171 PSPPSDVPSLLS------GVPSPPSDVPSPPSDVPSPPSDVPLLSD-----VPSPPSDVP 219
Query: 432 VFECPGTPEAAITSLTSGISSDYSLEE--IDEKEELSEVPKVEAENISPKS------QDI 483
+ +P + + SL S + S + D LS VP ++ ISP S D+
Sbjct: 220 LLSDVPSPPSDVPSLPSDVPSLSGVPSPPSDVPSLLSGVPSPPSD-ISPPSDVPSLLSDV 278
Query: 484 PFVSTDIINTLKNDP 498
P + +D+ + L P
Sbjct: 279 PSLPSDVPSLLSGVP 293
>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
Length = 1573
Score = 43.5 bits (101), Expect = 0.001
Identities = 75/348 (21%), Positives = 109/348 (31%), Gaps = 46/348 (13%)
Query: 777 PKSLEISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISESPE---EPLPN 833
PK L SE + + + T ++ T + S S SP+ P P
Sbjct: 1095 PKELTSDPSTPSEVTSLSPTSEQ--VPESDTTPDLDTTPYSSTVSEYSRSPDPSPSPHPT 1152
Query: 834 LKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKS 893
P P + + P + +P P P P T T + + + +
Sbjct: 1153 TTPDPTMAPD---PITTLNPTVTPHFPTTPHPTTTPHPTTITHSTMIPDPTTTPQPFTTI 1209
Query: 894 RASNAQAKPSSF---FLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERD--MLP 948
S P++ F MQ + H T H P P +T+ D P
Sbjct: 1210 THSTMIPDPTTTPQPFTTMQPTTTPHSTTP------HPTTTPHPTTITHSTMIPDPTTTP 1263
Query: 949 SPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPASQVSTQNLKT 1008
P T+ P + MPH P T P P + P P T P + T
Sbjct: 1264 QPFTTMQPTT-MPHPTTTPHPTTTPHPTTTPHPTTTPHPTMTPDPTTTPYPTTTPDPTTT 1322
Query: 1009 LKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSVNKF 1068
P P + S + V S E + SP+ + V+P +
Sbjct: 1323 ------PHPTTPDPSSTPVITTVSLPTSLGTELS-SPTLAPTVKPSLH------------ 1363
Query: 1069 VDIPQLGVSDKENNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDP 1116
PQL + A + SQIPT P+ S T S DP
Sbjct: 1364 ---PQLTFTAP----APHTSTSQIPTLEPSPALESSPSRSSTATSMDP 1404
Score = 38.1 bits (87), Expect = 0.049
Identities = 71/347 (20%), Positives = 117/347 (33%), Gaps = 48/347 (13%)
Query: 801 ALGKKHTHENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQV-----PSSVSSPDD 855
AL + E +A+ +E A S++P+ P P P RT + ++S+PD
Sbjct: 1021 ALTSDSSRELTPHSALTSE--ATSDAPDTSPPT--PDPASRTNPDLILTSPDFALSTPDS 1076
Query: 856 AMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSG 915
++V L P P T P P + S+ S + ++ P S
Sbjct: 1077 SVVPALTPEPSPT----PLPTLPKELTSDPSTPSEVTSLSPTSEQVPESDTTPDLDTTPY 1132
Query: 916 HYVTSAAAKSVHAAPNPAPKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDD 975
S ++S P+P+P + M P P TL+P + PH P T
Sbjct: 1133 SSTVSEYSRS----PDPSPSPHPTTTPDPTMAPDPITTLNP-TVTPHFPTTPHPTTTPHP 1187
Query: 976 VIGQAPAEASPPPIAPKPVT-------IPASQVSTQNLKTLKTFGAPR---PYSSSGPSP 1025
P P+P T IP + Q T++ P P+ ++ P P
Sbjct: 1188 TTITHSTMIPDPTTTPQPFTTITHSTMIPDPTTTPQPFTTMQPTTTPHSTTPHPTTTPHP 1247
Query: 1026 FALAVVKRSQSFSKERTESPSASALVQP-----PANTEEGKTHSVNKFVDIPQLGVSDKE 1080
+ + + T +P +QP P T T P +
Sbjct: 1248 TTIT----HSTMIPDPTTTPQPFTTMQPTTMPHPTTTPHPTT--------TPHPTTTPHP 1295
Query: 1081 NNSAHNEQNSQIPTPTDGPSFTVMRQSSLTFQSSDPEQMRQSLLTAI 1127
+ H + P PT P T + T + P+ ++T +
Sbjct: 1296 TTTPH---PTMTPDPTTTPYPTTTPDPTTTPHPTTPDPSSTPVITTV 1339
Score = 32.7 bits (73), Expect = 2.1
Identities = 57/288 (19%), Positives = 90/288 (31%), Gaps = 61/288 (21%)
Query: 826 SPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINN 885
SP +P P +P T P+ P SP P P +T D+ + P+ +
Sbjct: 984 SPRKPWPERRPPRPAATRTAPPTPSPGPS---ASPGPPGPALTSDS-SRELTPH-----S 1034
Query: 886 ILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTNKEAERD 945
L S+ S A + + P P P TN +
Sbjct: 1035 ALTSEATSDAPDT-----------------------------SPPTPDPASRTNPDL--- 1062
Query: 946 MLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASPPPIAPKPVTIPASQVSTQN 1005
+L SP+ LS D V+ E SP P+ P + + +
Sbjct: 1063 ILTSPDFALST---------------PDSSVVPALTPEPSPTPLPTLPKELTSDPSTPSE 1107
Query: 1006 LKTLKTFGAPRPYSSSGPSPFALAVVKRSQSFSKERTESPSASALVQPPANTEEGKTHSV 1065
+ +L P S + P +S+ SPS P ++
Sbjct: 1108 VTSLSPTSEQVPESDTTPDLDTTPYSSTVSEYSRSPDPSPSPHPTTTPDPTMAPDPITTL 1167
Query: 1066 NKFVDIPQLGVSDKENNSAHN---EQNSQIPTPTDGPS-FTVMRQSSL 1109
N V P + + H ++ IP PT P FT + S++
Sbjct: 1168 NPTV-TPHFPTTPHPTTTPHPTTITHSTMIPDPTTTPQPFTTITHSTM 1214
>gi|237757326 synaptojanin 1 isoform d [Homo sapiens]
Length = 1526
Score = 43.5 bits (101), Expect = 0.001
Identities = 65/296 (21%), Positives = 97/296 (32%), Gaps = 50/296 (16%)
Query: 819 EDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRD-------- 870
+ S I P PLP P L + P +P P +P P R
Sbjct: 1077 QSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQRPPPPSGRSQPSPQAGL 1136
Query: 871 -----TGTAPFAPNLEEINNILES-KFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAK 924
G + P + ++ + + +RAS + P S TS +K
Sbjct: 1137 AGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPES-----------QSKTSETSK 1185
Query: 925 SVHAAPNPAPKELTNKEAERDMLPSPEQTL-SPL----SKMPHSVPQPLVEKTDDDVIGQ 979
P P + + LP P Q L PL + MP S PQP +E
Sbjct: 1186 GSTFLPEPLKPQAA--FPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLE--------- 1234
Query: 980 APAEASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPF------ALAVVKR 1033
PPP + ++P+ S +KT R S PF LAV K
Sbjct: 1235 --TPPQPPPRSRSSHSLPSEASSQPQVKTNGISDGKRE-SPLKIDPFEDLSFNLLAVSKA 1291
Query: 1034 SQSFSKERTESPSASALVQPPANTEEGKTHSVNKFVDIPQLGVSDKENNSAHNEQN 1089
S +P L+Q P+ T+ SV+ +P + + + + N
Sbjct: 1292 QLSVQTSPVPTPDPKRLIQLPSATQSNVLSSVSCMPTMPPIPARSQSQENMRSSPN 1347
>gi|118600981 jumonji domain containing 1C isoform a [Homo sapiens]
Length = 2540
Score = 43.1 bits (100), Expect = 0.002
Identities = 87/434 (20%), Positives = 160/434 (36%), Gaps = 58/434 (13%)
Query: 471 VEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHS 530
+E +N+ P + F+ + + LK + +QN P
Sbjct: 228 LEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRANQNVNAVHSHYTRAQANSPRP 287
Query: 531 VVYDTSN-GKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAK 589
+ + K+ + +S+ PN+ + I E ++ + + + E N +G K
Sbjct: 288 AMNSQAAVPKQNTHQQQQQRSIRPNKRKGSDSSIPDEEKMKEEKYDYISRGE-NPKGKNK 346
Query: 590 N----NNIDMEVERPSNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQT- 644
+ E E+ N + TD + E+ + +S ++++ S+E+ + ++
Sbjct: 347 HLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENS--NKRIIDNSSEQKPENELKNK 404
Query: 645 -TPSCNSFDGKHQDHNLSDSKVEECVQTSNNNIST--QHSCLSSQDSVNTSREFRSQGTL 701
T N +GK ++ + + + Q + I +H + SV+T + Q +
Sbjct: 405 NTSKINGEEGKPHNNEKAGEETLKNSQPPWDQIQEDKKHEEAEKRKSVDT----QLQEDM 460
Query: 702 IIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEIT- 760
IIHS + TV D H ++DLLP +DK T L + P PK +IT
Sbjct: 461 IIHSSEQSTVSD----HNSNDLLPQECNMDKTHTMELLPKEKFVSRP--PTPKCVIDITN 514
Query: 761 --------------------REYIPKIGMTTYKIVPPKSLEISK-----DWQSETIEYKD 795
++ P + + + I K LE +K W S+ ++
Sbjct: 515 DTNLEKVAQENSSTFGLQTLQKMDPNVSDSKHSIANAKFLETAKKDSDQSWVSDVVKVDL 574
Query: 796 DQDM---HALGKKHTH-ENVKETAIQTEDSAISESPEEPLPNLKPKP-----NLRTEHQV 846
Q + G H + E K + + SA+S E+ L P P L T
Sbjct: 575 TQSSVTNASSGNDHLNMEKEKYVSYISPLSAVSVM-EDKLHKRSPPPETIKSKLNTSVDT 633
Query: 847 PSSVSSPDDAMVSP 860
SSP +V P
Sbjct: 634 HKIKSSPSPEVVKP 647
>gi|68342036 jumonji domain containing 1C isoform b [Homo sapiens]
Length = 2303
Score = 43.1 bits (100), Expect = 0.002
Identities = 87/434 (20%), Positives = 160/434 (36%), Gaps = 58/434 (13%)
Query: 471 VEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKSTDGQEPHS 530
+E +N+ P + F+ + + LK + +QN P
Sbjct: 9 LEPQNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRANQNVNAVHSHYTRAQANSPRP 68
Query: 531 VVYDTSN-GKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAK 589
+ + K+ + +S+ PN+ + I E ++ + + + E N +G K
Sbjct: 69 AMNSQAAVPKQNTHQQQQQRSIRPNKRKGSDSSIPDEEKMKEEKYDYISRGE-NPKGKNK 127
Query: 590 N----NNIDMEVERPSNSEAHETDTAISYKENHLAASSVPDQKLNQPSAEKTKDAAIQT- 644
+ E E+ N + TD + E+ + +S ++++ S+E+ + ++
Sbjct: 128 HLMNKRRKPEEDEKKLNMKRLRTDNVSDFSESSDSENS--NKRIIDNSSEQKPENELKNK 185
Query: 645 -TPSCNSFDGKHQDHNLSDSKVEECVQTSNNNIST--QHSCLSSQDSVNTSREFRSQGTL 701
T N +GK ++ + + + Q + I +H + SV+T + Q +
Sbjct: 186 NTSKINGEEGKPHNNEKAGEETLKNSQPPWDQIQEDKKHEEAEKRKSVDT----QLQEDM 241
Query: 702 IIHSEDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEIT- 760
IIHS + TV D H ++DLLP +DK T L + P PK +IT
Sbjct: 242 IIHSSEQSTVSD----HNSNDLLPQECNMDKTHTMELLPKEKFVSRP--PTPKCVIDITN 295
Query: 761 --------------------REYIPKIGMTTYKIVPPKSLEISK-----DWQSETIEYKD 795
++ P + + + I K LE +K W S+ ++
Sbjct: 296 DTNLEKVAQENSSTFGLQTLQKMDPNVSDSKHSIANAKFLETAKKDSDQSWVSDVVKVDL 355
Query: 796 DQDM---HALGKKHTH-ENVKETAIQTEDSAISESPEEPLPNLKPKP-----NLRTEHQV 846
Q + G H + E K + + SA+S E+ L P P L T
Sbjct: 356 TQSSVTNASSGNDHLNMEKEKYVSYISPLSAVSVM-EDKLHKRSPPPETIKSKLNTSVDT 414
Query: 847 PSSVSSPDDAMVSP 860
SSP +V P
Sbjct: 415 HKIKSSPSPEVVKP 428
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 43.1 bits (100), Expect = 0.002
Identities = 121/678 (17%), Positives = 233/678 (34%), Gaps = 109/678 (16%)
Query: 338 GRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRV---TALQPVDGVPPD 394
G+ +A S SS S + + +K S + P D SRV + PP
Sbjct: 182 GKPQAVSSLNSSHSRSHGNDHHSKEHQRSKSPRDPDANWDSPSRVPFSSGQHSTQSFPPS 241
Query: 395 SASEANSPEELSSPETFHPGLSSQEQCTAPKLMEE--------TSVFECPGTPEAAITSL 446
S++NS L P + + QE PKL E S+ E + +A +T L
Sbjct: 242 LMSKSNSM--LQKPTAYVRPMDGQESME-PKLSSEHYSSQSHGNSMTELKPSSKAHLTKL 298
Query: 447 T-------SGISSDYS-LEEIDEKEELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDP 498
+ S D S ++EI ++ S P + A + K++ F P
Sbjct: 299 KIPSQPLDASASGDVSCVDEILKEMTHSWPPPLTAIHTPCKTEPSKF------------P 346
Query: 499 DSALGNGSGEFSQNSMEEKQETKSTDGQEPHSVVYDT--------SNGKKVVDSIRNLKS 550
+ F + +K+++G + S++ D S+G++ D +
Sbjct: 347 FPTKESQQSNFGTGEQKRYNPSKTSNGHQSKSMLKDDLKLSSSEDSDGEQDCDKTMPRST 406
Query: 551 LGPNQENVQNEIIVYPENTEDNMKNGVKKTEINVEGVAKNNNIDMEVERPSNSEAHETDT 610
G N E + + +D+ + ++ + +++++ D E PS S + E +
Sbjct: 407 PGSNSEPSHHNSEGADNSRDDSSSHSGSESSSGSDSESESSSSDSEANEPSQSASPEPEP 466
Query: 611 AISYK-----------ENHLAASSVPDQKLNQPSAEKTKDAAIQTTPSCNSFDGKHQDHN 659
+ K + ++ +S D + K + T S G + +
Sbjct: 467 PPTNKWQLDNWLNKVNPHKVSPASSVDSNIPSSQGYKKEGREQGTGNSYTDTSGPKETSS 526
Query: 660 LSDSKVEECVQTSNNNISTQHSCLSSQDSVNTSREF--------------RSQGTLIIHS 705
+ + + +Q + + + + DS R +G L I S
Sbjct: 527 ATPGRDSKTIQKGSESGRGRQKSPAQSDSTTQRRTVGKKQPKKAEKAAAEEPRGGLKIES 586
Query: 706 EDPLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKPKPSNEITREYIP 765
E P+ + + + ++ A+ P +++ P+P+ E
Sbjct: 587 ETPVDLASSMPS-------------SRHKAATKGSRKPNIKKESKSSPRPTAE------K 627
Query: 766 KIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGKKHTHEN---VKETAIQTEDSA 822
K +T K I D S + + + K+ N VK ++++ EDS
Sbjct: 628 KKYKSTSKSSQKSREIIETDTSSSDSDESESLPPSSQTPKYPESNRTPVKPSSVEEEDSF 687
Query: 823 ISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDTGTAPF---APN 879
+ P+ E ++ S +S PDD +K + P+ P
Sbjct: 688 FRQRMFSPM----------EEKELLSPLSEPDDRYPLIVKIDLNLLTRIPGKPYKETEPP 737
Query: 880 LEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTN 939
E N+ E + A K S+ + K + + + + K +N
Sbjct: 738 KGEKKNVPEKHTREAQKQASEKVSNKGKRKHKNEDDNRASESKKPKTEDKNSAGHKPSSN 797
Query: 940 KEA-------ERDMLPSP 950
+E+ E+D+LPSP
Sbjct: 798 RESSKQSAAKEKDLLPSP 815
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 42.7 bits (99), Expect = 0.002
Identities = 66/327 (20%), Positives = 107/327 (32%), Gaps = 35/327 (10%)
Query: 708 PLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKP--KPSNEITREYIP 765
P T K+P + P K + K+ P ++ P KP+ +E P
Sbjct: 264 PTTTKEPAPTTPKE----PAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAP 319
Query: 766 KIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISE 825
TT K P + + E + KK KE A T
Sbjct: 320 ----TTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 375
Query: 826 SPEEPLPNLKPKPNLRTEHQVPSSVSSP-----DDAMVSPLKPAPKMTRDTG-TAPFAPN 879
+ +EP P +P T P++ P A +P +P+P T++ T P P
Sbjct: 376 TTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 435
Query: 880 LEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTN 939
+ K A +P+ T A + P P + T
Sbjct: 436 PTTPKKPAPTTPKEPAPTTPKEPAP------------TTTKKPAPTTPKEPAPTTPKETA 483
Query: 940 KEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASP-PPIAPKPVTIPA 998
+ + P+ + L+P + P+ T +++ P E +P P P P T A
Sbjct: 484 PTTPKKLTPTTPEKLAP------TTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKA 537
Query: 999 SQVSTQNLKTLKTFGAPRPYSSSGPSP 1025
+ +T T P P + P+P
Sbjct: 538 AAPNTPKEPAPTTPKEPAPTTPKEPAP 564
Score = 41.2 bits (95), Expect = 0.006
Identities = 80/390 (20%), Positives = 126/390 (32%), Gaps = 66/390 (16%)
Query: 750 NPKPK--PSNEITREYIPKIGMTTY---KIVPPKSLEISKDWQSETIEYKDDQDMHALGK 804
NP+P P+++ ++E + T K + + S D + +T K+ Q +
Sbjct: 125 NPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSA 184
Query: 805 KH--------------THENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSV 850
K K A+ T +P+EP +P P+++
Sbjct: 185 KDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEP-------TPTTI 237
Query: 851 SSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQ 910
S A +P +PAP T+ T P P + K A +P+
Sbjct: 238 KS---APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP------ 288
Query: 911 KRVSGHYVTSAAAKSVHAAPNPA----PKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQ 966
T+ +A + P P P T KE P+P P P P
Sbjct: 289 -------TTTKSAPTTPKEPAPTTPKKPAPTTPKE------PAPTTPKEPTPTTPKE-PA 334
Query: 967 PLVEKTDDDVIGQAPAEASP-PPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSP 1025
P T + P E +P P P P T +T T P P + P+P
Sbjct: 335 P----TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAP 390
Query: 1026 FALAVVKRSQSFSKERTESPSASALVQP----PANTEE-GKTHSVNKFVDIPQLGVSDKE 1080
K + + +KE + + SA P P T+E T P+
Sbjct: 391 ---TTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 447
Query: 1081 NNSAHNEQNSQIPTPTDGPSFTVMRQSSLT 1110
A PT T P+ T ++ + T
Sbjct: 448 KEPAPTTPKEPAPTTTKKPAPTTPKEPAPT 477
Score = 39.7 bits (91), Expect = 0.017
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 43/274 (15%)
Query: 251 RDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPK--KRRAPLPPMPASQSVPQ 308
++ + P P + PT T+ T S T AP K AP P + + P+
Sbjct: 584 KEPAPTTPKKPAPKELAPTTTKEPT------STTCDKPAPTTPKGTAPTTPKEPAPTTPK 637
Query: 309 DLAHIQERPASCIVKSMSVDETDKSPCE---AGRVRAGSLQLSSMSAGNSSLRRT----- 360
+ A + + T K P A G +S ++ + T
Sbjct: 638 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 697
Query: 361 --------KRKAPSPPSKIPPHQSDENSRVTALQPV------DGVPPDSASEA------N 400
K+ AP+ P PP S+ ++ T +P D P+ ++E N
Sbjct: 698 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 757
Query: 401 SPEELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEID 460
SP+E P T P + E T K ++T+ + TPE + T+
Sbjct: 758 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPE----TTTAAPKMTKETATTT 811
Query: 461 EKEELSEVPKVEAENISPKSQD-IPFVSTDIINT 493
EK S++ + S +QD PF T + T
Sbjct: 812 EKTTESKITATTTQVTSTTTQDTTPFKITTLKTT 845
Score = 37.0 bits (84), Expect = 0.11
Identities = 53/262 (20%), Positives = 87/262 (33%), Gaps = 27/262 (10%)
Query: 807 THENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPK 866
T V E + I +SP+E P L +P + P P + KP
Sbjct: 719 TTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMT 778
Query: 867 MT-RDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKS 925
T +D T E K A+ + S +V+
Sbjct: 779 TTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFK 838
Query: 926 VHAAPNP--APKELTNKE--AERDMLPSPEQTLSPLSKMPHS---VPQPLVEKTDDDVIG 978
+ APK T K+ +++ PE+T P + +S P+P
Sbjct: 839 ITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKP----------- 887
Query: 979 QAPAEASPPPIA-PKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSF 1037
Q P +A P + KP T+P ++ KT PR +S+ P + + +
Sbjct: 888 QKPTKAPKKPTSTKKPKTMP-------RVRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQ 940
Query: 1038 SKERTESPSASALVQPPANTEE 1059
+ R S LV+ +E+
Sbjct: 941 TTTRPNQTPNSKLVEVNPKSED 962
Score = 36.2 bits (82), Expect = 0.19
Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 6/196 (3%)
Query: 247 SKKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQSV 306
+K+ T PA K PT + + P P+ K +P P + +
Sbjct: 337 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP----KEPAPTTTKEPSPTTPKEPAPTT 392
Query: 307 PQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT-KRKAP 365
+ + PA KS + SP + + + + T K AP
Sbjct: 393 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 452
Query: 366 SPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPK 425
+ P + P + + + T +P P ++A ++PE P + T P+
Sbjct: 453 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPE 512
Query: 426 LMEETSVFE-CPGTPE 440
+ T+ E P TPE
Sbjct: 513 ELAPTTPEEPTPTTPE 528
Score = 36.2 bits (82), Expect = 0.19
Identities = 69/315 (21%), Positives = 99/315 (31%), Gaps = 31/315 (9%)
Query: 812 KETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDT 871
KE A T +P+EP P PK T + + + A +P KPAP +
Sbjct: 456 KEPAPTTTKKPAPTTPKEPAPTT-PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEEL 514
Query: 872 G-TAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAP 930
T P P + K+ A N +P+ + + K A
Sbjct: 515 APTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKET-APT 573
Query: 931 NP---APKELTNKEAERDMLPSPEQTLSPLSKMPHSV----PQPLVEKTDDDVIGQAPAE 983
P AP L P+P++ +K P S P P K + PA
Sbjct: 574 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 633
Query: 984 ASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVV----KRSQSFSK 1039
+P AP T P T T P P + P+P LA S + K
Sbjct: 634 TTPKEPAP---TTPKGTAPT-------TLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDK 683
Query: 1040 ERTESPSASALVQP--PANTEEGKTHSVNKFVDIPQLG-----VSDKENNSAHNEQNSQI 1092
+P +A P PA T K P + KE + H +
Sbjct: 684 PAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDEST 743
Query: 1093 PTPTDGPSFTVMRQS 1107
P + P+ + S
Sbjct: 744 PELSAEPTPKALENS 758
Score = 35.8 bits (81), Expect = 0.24
Identities = 48/202 (23%), Positives = 73/202 (36%), Gaps = 10/202 (4%)
Query: 247 SKKKRDQTASAPATPLVNKHRPTFTR----SNTISKPYISNTLPSDAPKKRRAPLPPMPA 302
+K+ T PA P K PT T+ + T S P PS K AP P
Sbjct: 377 TKEPSPTTPKEPA-PTTTKSAPTTTKEPAPTTTKSAPTTPKE-PSPTTTKEPAPTTPKEP 434
Query: 303 SQSVPQDLAHIQER-PASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT- 360
+ + P+ A + PA K + T K + A + + L T
Sbjct: 435 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 494
Query: 361 -KRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQE 419
++ AP+ P K P +E + T +P P + A ++P+ P +
Sbjct: 495 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 554
Query: 420 QCTAPKLMEETSVFE-CPGTPE 440
T PK T+ E P TP+
Sbjct: 555 APTTPKEPAPTTPKETAPTTPK 576
Score = 35.8 bits (81), Expect = 0.24
Identities = 58/266 (21%), Positives = 94/266 (35%), Gaps = 37/266 (13%)
Query: 257 APATPLVNKHRPTFTRSNTISKPY--ISNTLPSDAPK--KRRAPLPPMPASQSVPQDLAH 312
AP TP + PT T + P T + AP K AP P + + P++ A
Sbjct: 507 APTTP--EELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 564
Query: 313 IQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIP 372
+ + + T K P + +L+ + + + AP+ P
Sbjct: 565 TTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTA 624
Query: 373 PHQSDENSRVTALQPVDGVPPDSA-----------SEANSPEELSSPETFHPGLSSQEQ- 420
P E + T +P P +A + +P+EL+ T P ++ ++
Sbjct: 625 PTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKP 684
Query: 421 -CTAPKLMEETSVFE---------CPGTPEAAITSLTSGISSDYSLEE--------IDEK 462
T PK T+ E P TPE TS +S+ + +E +
Sbjct: 685 APTTPKETAPTTPKEPAPTTPKKPAPTTPETP-PPTTSEVSTPTTTKEPTTIHKSPDEST 743
Query: 463 EELSEVPKVEAENISPKSQDIPFVST 488
ELS P +A SPK +P T
Sbjct: 744 PELSAEPTPKALENSPKEPGVPTTKT 769
Score = 30.8 bits (68), Expect = 7.9
Identities = 47/230 (20%), Positives = 76/230 (33%), Gaps = 28/230 (12%)
Query: 222 SCQISQNLDIMKEKENKGFFSFFQRSKKKRDQTASAPATPLVNKHRPTFTR--SNTISKP 279
S + +Q+++ K+ + K + T PA + PT + ++T K
Sbjct: 172 SAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKE 231
Query: 280 YISNTLPSDAPKKRRAPLPPMPASQ-SVPQDLAHIQERPASCIVKSMSVDETDKSPCEAG 338
T+ S AP + P P S + P++ A + + T K P
Sbjct: 232 PTPTTIKS-APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-- 288
Query: 339 RVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASE 398
+ S+ K AP+ P K P E + T +P P + A
Sbjct: 289 ------------TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 336
Query: 399 ANSPEELSSPETFHPGLSSQEQCTAPKLMEETSVFE-CPGTPEAAITSLT 447
P P + TAPK T+ E P TP+ + T
Sbjct: 337 TKEPA---------PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 377
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 42.7 bits (99), Expect = 0.002
Identities = 66/327 (20%), Positives = 107/327 (32%), Gaps = 35/327 (10%)
Query: 708 PLTVKDPICAHGNDDLLPPVDRIDKNSTASYLKNYPLYRQDYNPKP--KPSNEITREYIP 765
P T K+P + P K + K+ P ++ P KP+ +E P
Sbjct: 305 PTTTKEPAPTTPKE----PAPTTTKEPAPTTTKSAPTTPKEPAPTTPKKPAPTTPKEPAP 360
Query: 766 KIGMTTYKIVPPKSLEISKDWQSETIEYKDDQDMHALGKKHTHENVKETAIQTEDSAISE 825
TT K P + + E + KK KE A T
Sbjct: 361 ----TTPKEPTPTTPKEPAPTTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPT 416
Query: 826 SPEEPLPNLKPKPNLRTEHQVPSSVSSP-----DDAMVSPLKPAPKMTRDTG-TAPFAPN 879
+ +EP P +P T P++ P A +P +P+P T++ T P P
Sbjct: 417 TTKEPSPTTPKEPAPTTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPA 476
Query: 880 LEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAPNPAPKELTN 939
+ K A +P+ T A + P P + T
Sbjct: 477 PTTPKKPAPTTPKEPAPTTPKEPAP------------TTTKKPAPTTPKEPAPTTPKETA 524
Query: 940 KEAERDMLPSPEQTLSPLSKMPHSVPQPLVEKTDDDVIGQAPAEASP-PPIAPKPVTIPA 998
+ + P+ + L+P + P+ T +++ P E +P P P P T A
Sbjct: 525 PTTPKKLTPTTPEKLAP------TTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKA 578
Query: 999 SQVSTQNLKTLKTFGAPRPYSSSGPSP 1025
+ +T T P P + P+P
Sbjct: 579 AAPNTPKEPAPTTPKEPAPTTPKEPAP 605
Score = 41.2 bits (95), Expect = 0.006
Identities = 80/390 (20%), Positives = 126/390 (32%), Gaps = 66/390 (16%)
Query: 750 NPKPK--PSNEITREYIPKIGMTTY---KIVPPKSLEISKDWQSETIEYKDDQDMHALGK 804
NP+P P+++ ++E + T K + + S D + +T K+ Q +
Sbjct: 166 NPRPSLPPNSDTSKETSLTVNKETTVETKETTTTNKQTSTDGKEKTTSAKETQSIEKTSA 225
Query: 805 KH--------------THENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSV 850
K K A+ T +P+EP +P P+++
Sbjct: 226 KDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKEP-------TPTTI 278
Query: 851 SSPDDAMVSPLKPAPKMTRDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQ 910
S A +P +PAP T+ T P P + K A +P+
Sbjct: 279 KS---APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP------ 329
Query: 911 KRVSGHYVTSAAAKSVHAAPNPA----PKELTNKEAERDMLPSPEQTLSPLSKMPHSVPQ 966
T+ +A + P P P T KE P+P P P P
Sbjct: 330 -------TTTKSAPTTPKEPAPTTPKKPAPTTPKE------PAPTTPKEPTPTTPKE-PA 375
Query: 967 PLVEKTDDDVIGQAPAEASP-PPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSP 1025
P T + P E +P P P P T +T T P P + P+P
Sbjct: 376 P----TTKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTTKEPSPTTPKEPAP 431
Query: 1026 FALAVVKRSQSFSKERTESPSASALVQP----PANTEE-GKTHSVNKFVDIPQLGVSDKE 1080
K + + +KE + + SA P P T+E T P+
Sbjct: 432 ---TTTKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTP 488
Query: 1081 NNSAHNEQNSQIPTPTDGPSFTVMRQSSLT 1110
A PT T P+ T ++ + T
Sbjct: 489 KEPAPTTPKEPAPTTTKKPAPTTPKEPAPT 518
Score = 39.7 bits (91), Expect = 0.017
Identities = 60/274 (21%), Positives = 97/274 (35%), Gaps = 43/274 (15%)
Query: 251 RDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPK--KRRAPLPPMPASQSVPQ 308
++ + P P + PT T+ T S T AP K AP P + + P+
Sbjct: 625 KEPAPTTPKKPAPKELAPTTTKEPT------STTCDKPAPTTPKGTAPTTPKEPAPTTPK 678
Query: 309 DLAHIQERPASCIVKSMSVDETDKSPCE---AGRVRAGSLQLSSMSAGNSSLRRT----- 360
+ A + + T K P A G +S ++ + T
Sbjct: 679 EPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTP 738
Query: 361 --------KRKAPSPPSKIPPHQSDENSRVTALQPV------DGVPPDSASEA------N 400
K+ AP+ P PP S+ ++ T +P D P+ ++E N
Sbjct: 739 KEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALEN 798
Query: 401 SPEELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEID 460
SP+E P T P + E T K ++T+ + TPE + T+
Sbjct: 799 SPKEPGVPTTKTPAATKPEMTTTAK--DKTTERDLRTTPE----TTTAAPKMTKETATTT 852
Query: 461 EKEELSEVPKVEAENISPKSQD-IPFVSTDIINT 493
EK S++ + S +QD PF T + T
Sbjct: 853 EKTTESKITATTTQVTSTTTQDTTPFKITTLKTT 886
Score = 37.0 bits (84), Expect = 0.11
Identities = 53/262 (20%), Positives = 87/262 (33%), Gaps = 27/262 (10%)
Query: 807 THENVKETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPK 866
T V E + I +SP+E P L +P + P P + KP
Sbjct: 760 TTSEVSTPTTTKEPTTIHKSPDESTPELSAEPTPKALENSPKEPGVPTTKTPAATKPEMT 819
Query: 867 MT-RDTGTAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKS 925
T +D T E K A+ + S +V+
Sbjct: 820 TTAKDKTTERDLRTTPETTTAAPKMTKETATTTEKTTESKITATTTQVTSTTTQDTTPFK 879
Query: 926 VHAAPNP--APKELTNKE--AERDMLPSPEQTLSPLSKMPHS---VPQPLVEKTDDDVIG 978
+ APK T K+ +++ PE+T P + +S P+P
Sbjct: 880 ITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPKP----------- 928
Query: 979 QAPAEASPPPIA-PKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVVKRSQSF 1037
Q P +A P + KP T+P ++ KT PR +S+ P + + +
Sbjct: 929 QKPTKAPKKPTSTKKPKTMP-------RVRKPKTTPTPRKMTSTMPELNPTSRIAEAMLQ 981
Query: 1038 SKERTESPSASALVQPPANTEE 1059
+ R S LV+ +E+
Sbjct: 982 TTTRPNQTPNSKLVEVNPKSED 1003
Score = 36.2 bits (82), Expect = 0.19
Identities = 39/196 (19%), Positives = 68/196 (34%), Gaps = 6/196 (3%)
Query: 247 SKKKRDQTASAPATPLVNKHRPTFTRSNTISKPYISNTLPSDAPKKRRAPLPPMPASQSV 306
+K+ T PA K PT + + P P+ K +P P + +
Sbjct: 378 TKEPAPTTPKEPAPTAPKKPAPTTPKEPAPTTP----KEPAPTTTKEPSPTTPKEPAPTT 433
Query: 307 PQDLAHIQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT-KRKAP 365
+ + PA KS + SP + + + + T K AP
Sbjct: 434 TKSAPTTTKEPAPTTTKSAPTTPKEPSPTTTKEPAPTTPKEPAPTTPKKPAPTTPKEPAP 493
Query: 366 SPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQEQCTAPK 425
+ P + P + + + T +P P ++A ++PE P + T P+
Sbjct: 494 TTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPE 553
Query: 426 LMEETSVFE-CPGTPE 440
+ T+ E P TPE
Sbjct: 554 ELAPTTPEEPTPTTPE 569
Score = 36.2 bits (82), Expect = 0.19
Identities = 69/315 (21%), Positives = 99/315 (31%), Gaps = 31/315 (9%)
Query: 812 KETAIQTEDSAISESPEEPLPNLKPKPNLRTEHQVPSSVSSPDDAMVSPLKPAPKMTRDT 871
KE A T +P+EP P PK T + + + A +P KPAP +
Sbjct: 497 KEPAPTTTKKPAPTTPKEPAPTT-PKETAPTTPKKLTPTTPEKLAPTTPEKPAPTTPEEL 555
Query: 872 G-TAPFAPNLEEINNILESKFKSRASNAQAKPSSFFLQMQKRVSGHYVTSAAAKSVHAAP 930
T P P + K+ A N +P+ + + K A
Sbjct: 556 APTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKET-APT 614
Query: 931 NP---APKELTNKEAERDMLPSPEQTLSPLSKMPHSV----PQPLVEKTDDDVIGQAPAE 983
P AP L P+P++ +K P S P P K + PA
Sbjct: 615 TPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 674
Query: 984 ASPPPIAPKPVTIPASQVSTQNLKTLKTFGAPRPYSSSGPSPFALAVV----KRSQSFSK 1039
+P AP T P T T P P + P+P LA S + K
Sbjct: 675 TTPKEPAP---TTPKGTAPT-------TLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDK 724
Query: 1040 ERTESPSASALVQP--PANTEEGKTHSVNKFVDIPQLG-----VSDKENNSAHNEQNSQI 1092
+P +A P PA T K P + KE + H +
Sbjct: 725 PAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTIHKSPDEST 784
Query: 1093 PTPTDGPSFTVMRQS 1107
P + P+ + S
Sbjct: 785 PELSAEPTPKALENS 799
Score = 35.8 bits (81), Expect = 0.24
Identities = 48/202 (23%), Positives = 73/202 (36%), Gaps = 10/202 (4%)
Query: 247 SKKKRDQTASAPATPLVNKHRPTFTR----SNTISKPYISNTLPSDAPKKRRAPLPPMPA 302
+K+ T PA P K PT T+ + T S P PS K AP P
Sbjct: 418 TKEPSPTTPKEPA-PTTTKSAPTTTKEPAPTTTKSAPTTPKE-PSPTTTKEPAPTTPKEP 475
Query: 303 SQSVPQDLAHIQER-PASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRT- 360
+ + P+ A + PA K + T K + A + + L T
Sbjct: 476 APTTPKKPAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTT 535
Query: 361 -KRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASEANSPEELSSPETFHPGLSSQE 419
++ AP+ P K P +E + T +P P + A ++P+ P +
Sbjct: 536 PEKLAPTTPEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEP 595
Query: 420 QCTAPKLMEETSVFE-CPGTPE 440
T PK T+ E P TP+
Sbjct: 596 APTTPKEPAPTTPKETAPTTPK 617
Score = 35.8 bits (81), Expect = 0.24
Identities = 58/266 (21%), Positives = 94/266 (35%), Gaps = 37/266 (13%)
Query: 257 APATPLVNKHRPTFTRSNTISKPY--ISNTLPSDAPK--KRRAPLPPMPASQSVPQDLAH 312
AP TP + PT T + P T + AP K AP P + + P++ A
Sbjct: 548 APTTP--EELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAP 605
Query: 313 IQERPASCIVKSMSVDETDKSPCEAGRVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIP 372
+ + + T K P + +L+ + + + AP+ P
Sbjct: 606 TTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKEPTSTTCDKPAPTTPKGTA 665
Query: 373 PHQSDENSRVTALQPVDGVPPDSA-----------SEANSPEELSSPETFHPGLSSQEQ- 420
P E + T +P P +A + +P+EL+ T P ++ ++
Sbjct: 666 PTTPKEPAPTTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKP 725
Query: 421 -CTAPKLMEETSVFE---------CPGTPEAAITSLTSGISSDYSLEE--------IDEK 462
T PK T+ E P TPE TS +S+ + +E +
Sbjct: 726 APTTPKETAPTTPKEPAPTTPKKPAPTTPETP-PPTTSEVSTPTTTKEPTTIHKSPDEST 784
Query: 463 EELSEVPKVEAENISPKSQDIPFVST 488
ELS P +A SPK +P T
Sbjct: 785 PELSAEPTPKALENSPKEPGVPTTKT 810
Score = 30.8 bits (68), Expect = 7.9
Identities = 47/230 (20%), Positives = 76/230 (33%), Gaps = 28/230 (12%)
Query: 222 SCQISQNLDIMKEKENKGFFSFFQRSKKKRDQTASAPATPLVNKHRPTFTR--SNTISKP 279
S + +Q+++ K+ + K + T PA + PT + ++T K
Sbjct: 213 SAKETQSIEKTSAKDLAPTSKVLAKPTPKAETTTKGPALTTPKEPTPTTPKEPASTTPKE 272
Query: 280 YISNTLPSDAPKKRRAPLPPMPASQ-SVPQDLAHIQERPASCIVKSMSVDETDKSPCEAG 338
T+ S AP + P P S + P++ A + + T K P
Sbjct: 273 PTPTTIKS-APTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTTTKEPAP-- 329
Query: 339 RVRAGSLQLSSMSAGNSSLRRTKRKAPSPPSKIPPHQSDENSRVTALQPVDGVPPDSASE 398
+ S+ K AP+ P K P E + T +P P + A
Sbjct: 330 ------------TTTKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPT 377
Query: 399 ANSPEELSSPETFHPGLSSQEQCTAPKLMEETSVFE-CPGTPEAAITSLT 447
P P + TAPK T+ E P TP+ + T
Sbjct: 378 TKEPA---------PTTPKEPAPTAPKKPAPTTPKEPAPTTPKEPAPTTT 418
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 42.7 bits (99), Expect = 0.002
Identities = 49/231 (21%), Positives = 87/231 (37%), Gaps = 25/231 (10%)
Query: 404 ELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKE 463
++ P+ P L Q + +++EET V + E A+T++T ++ E+ + E
Sbjct: 435 KIQKPKVEAPKLKVQHKFVE-EIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAE 493
Query: 464 ELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKST 523
E E P+ E E ++ K + + ++ G E Q EE+ E +
Sbjct: 494 EKEEEPEAEEEEVAAKKSPVKATAPEV--------KEEEGEKEEEEGQEEEEEEDEGAKS 545
Query: 524 DGQEPHSVVYDTSNGKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEIN 583
D E + S+ K+ E + E E E K KK E
Sbjct: 546 DQAEEGGSEKEGSSEKE-------------EGEQEEGETEAEAEGEEAEAKE-EKKVEEK 591
Query: 584 VEGVAKNNNI--DMEVERPSNSEAHETDTAISYKENHLAASSVPDQKLNQP 632
E VA + D +VE+P +++ + + K S ++K P
Sbjct: 592 SEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSP 642
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 42.7 bits (99), Expect = 0.002
Identities = 49/231 (21%), Positives = 87/231 (37%), Gaps = 25/231 (10%)
Query: 404 ELSSPETFHPGLSSQEQCTAPKLMEETSVFECPGTPEAAITSLTSGISSDYSLEEIDEKE 463
++ P+ P L Q + +++EET V + E A+T++T ++ E+ + E
Sbjct: 59 KIQKPKVEAPKLKVQHKFVE-EIIEETKVEDEKSEMEEALTAITEELAVSMKEEKKEAAE 117
Query: 464 ELSEVPKVEAENISPKSQDIPFVSTDIINTLKNDPDSALGNGSGEFSQNSMEEKQETKST 523
E E P+ E E ++ K + + ++ G E Q EE+ E +
Sbjct: 118 EKEEEPEAEEEEVAAKKSPVKATAPEV--------KEEEGEKEEEEGQEEEEEEDEGAKS 169
Query: 524 DGQEPHSVVYDTSNGKKVVDSIRNLKSLGPNQENVQNEIIVYPENTEDNMKNGVKKTEIN 583
D E + S+ K+ E + E E E K KK E
Sbjct: 170 DQAEEGGSEKEGSSEKE-------------EGEQEEGETEAEAEGEEAEAKE-EKKVEEK 215
Query: 584 VEGVAKNNNI--DMEVERPSNSEAHETDTAISYKENHLAASSVPDQKLNQP 632
E VA + D +VE+P +++ + + K S ++K P
Sbjct: 216 SEEVATKEELVADAKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSP 266
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.124 0.346
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,643,883
Number of Sequences: 37866
Number of extensions: 2633682
Number of successful extensions: 13051
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 534
Number of HSP's that attempted gapping in prelim test: 11171
Number of HSP's gapped (non-prelim): 2137
length of query: 1166
length of database: 18,247,518
effective HSP length: 113
effective length of query: 1053
effective length of database: 13,968,660
effective search space: 14708998980
effective search space used: 14708998980
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.