COBLL1 34242

Name: COBLL1	Sequence: fasta or formatted (1166aa)		NCBI GI: 62821787
Description: COBL-like 1		Referenced in: Planar Cell Polarity Stem Cells and Early Development
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 77 3 C cysteine 1.0 12 1 D aspartate 5.7 67 3 E glutamate 7.5 87 2 F phenylalanine 2.2 26 2 G glycine 3.2 37 1 H histidine 2.4 28 1 I isoleucine 5.1 59 2 K lysine 8.1 94 3 L leucine 6.6 77 3 M methionine 2.2 26 2 N asparagine 5.5 64 3 P proline 9.6 112 3 Q glutamine 4.9 57 1 R arginine 3.6 42 2 S serine 12.1 141 3 T threonine 6.5 76 2 V valine 5.5 64 2 W tryptophan 0.1 1 1 Y tyrosine 1.6 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 COBL-like 1 COBL 0.090 cordon-bleu homolog TXNDC2 0.014 thioredoxin domain-containing 2 isoform 1 TXNDC2 0.014 thioredoxin domain-containing 2 isoform 2 TXNDC2 0.014 thioredoxin domain-containing 2 isoform 1 SRRM2 0.014 splicing coactivator subunit SRm300 PCLO 0.011 piccolo isoform 2 PCLO 0.011 piccolo isoform 1 RBBP6 0.011 retinoblastoma-binding protein 6 isoform 2 RBBP6 0.011 retinoblastoma-binding protein 6 isoform 1 DSPP 0.010 dentin sialophosphoprotein preproprotein MUC17 0.010 mucin 17 PRG4 0.010 proteoglycan 4 isoform B PRG4 0.010 proteoglycan 4 isoform A NOLC1 0.009 nucleolar and coiled-body phosphoprotein 1 PRDM2 0.009 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.009 retinoblastoma protein-binding zinc finger protein i... PRDM2 0.009 retinoblastoma protein-binding zinc finger protein i... NEFH 0.009 neurofilament, heavy polypeptide 200kDa MDC1 0.008 mediator of DNA-damage checkpoint 1 LOC100134663 0.008 PREDICTED: hypothetical protein, partial LOC284297 0.008 hypothetical protein LOC284297 SYNJ1 0.008 synaptojanin 1 isoform d JMJD1C 0.008 jumonji domain containing 1C isoform a JMJD1C 0.008 jumonji domain containing 1C isoform b AFF4 0.008 ALL1 fused gene from 5q31 PRG4 0.008 proteoglycan 4 isoform D PRG4 0.008 proteoglycan 4 isoform C NEFM 0.008 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.008 neurofilament, medium polypeptide 150kDa isoform 2 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.