Guide to the Human Genome
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Name: CARS Sequence: fasta or formatted (738aa) NCBI GI: 62240994
Description:

cysteinyl-tRNA synthetase isoform d

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [748aa] cysteinyl-tRNA synthetase isoform b
alt prot [726aa] cysteinyl-tRNA synthetase isoform a
alt prot [831aa] cysteinyl-tRNA synthetase isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         52           2
 C cysteine            1.5         11           2
 D aspartate           6.1         45           2
 E glutamate           9.2         68           3
 F phenylalanine       4.9         36           2
 G glycine             5.1         38           3
 H histidine           2.6         19           2
 I isoleucine          3.8         28           2
 K lysine              8.8         65           3
 L leucine            10.4         77           2
 M methionine          2.6         19           1
 N asparagine          3.5         26           1
 P proline             4.5         33           2
 Q glutamine           4.5         33           2
 R arginine            4.9         36           2
 S serine              6.1         45           2
 T threonine           4.1         30           2
 V valine              6.1         45           2
 W tryptophan          1.4         10           1
 Y tyrosine            3.0         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteinyl-tRNA synthetase isoform d 
CARS                  0.962   cysteinyl-tRNA synthetase isoform c 
CARS                  0.962   cysteinyl-tRNA synthetase isoform b 
CARS                  0.902   cysteinyl-tRNA synthetase isoform a 
CARS2                 0.147   cysteinyl-tRNA synthetase 2, mitochondrial 
UPF2                  0.014   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.014   UPF2 regulator of nonsense transcripts homolog [Homo...
LOC283685             0.012   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.012   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CALD1                 0.012   caldesmon 1 isoform 5 
CALD1                 0.012   caldesmon 1 isoform 4 
CALD1                 0.012   caldesmon 1 isoform 3 
CALD1                 0.012   caldesmon 1 isoform 2 
CALD1                 0.012   caldesmon 1 isoform 1 
LOC645202             0.011   PREDICTED: hypothetical protein LOC645202 
TAF3                  0.011   RNA polymerase II transcription factor TAFII140 [Ho...
CENPE                 0.011   centromere protein E 
MAP4K4                0.011   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.011   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.011   mitogen-activated protein kinase kinase kinase kinas...
LOC100294088          0.011   PREDICTED: hypothetical protein, partial 
UPF3A                 0.010   UPF3 regulator of nonsense transcripts homolog A iso...
UPF3A                 0.010   UPF3 regulator of nonsense transcripts homolog A iso...
ACBD3                 0.010   acyl-Coenzyme A binding domain containing 3 
INCENP                0.010   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.010   inner centromere protein antigens 135/155kDa isofor...
LARS                  0.010   leucyl-tRNA synthetase 
CHAF1A                0.010   chromatin assembly factor 1, subunit A (p150) 
LOC727832             0.010   golgi autoantigen, golgin subfamily a-like 
GOLGA6D               0.009   golgi autoantigen, golgin subfamily a, 6D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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