Guide to the Human Genome
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Name: LARS Sequence: fasta or formatted (1176aa) NCBI GI: 108773810
Description:

leucyl-tRNA synthetase

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         68           3
 C cysteine            1.8         21           2
 D aspartate           5.8         68           2
 E glutamate           7.9         93           7
 F phenylalanine       4.4         52           2
 G glycine             6.0         71           2
 H histidine           2.1         25           1
 I isoleucine          5.3         62           3
 K lysine              9.4        111           3
 L leucine             9.5        112           3
 M methionine          3.4         40           2
 N asparagine          3.7         43           2
 P proline             5.1         60           2
 Q glutamine           3.7         44           2
 R arginine            4.1         48           2
 S serine              5.4         63           2
 T threonine           4.9         58           2
 V valine              6.3         74           2
 W tryptophan          1.8         21           1
 Y tyrosine            3.6         42           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   leucyl-tRNA synthetase 
IARS2                 0.010   mitochondrial isoleucine tRNA synthetase 
LARS2                 0.010   leucyl-tRNA synthetase 2, mitochondrial precursor [Ho...
VARS                  0.008   valyl-tRNA synthetase 
MARS2                 0.008   methionine-tRNA synthetase 2 precursor 
IARS                  0.006   isoleucine tRNA synthetase 
IARS                  0.006   isoleucine tRNA synthetase 
CARS                  0.006   cysteinyl-tRNA synthetase isoform a 
CARS                  0.006   cysteinyl-tRNA synthetase isoform d 
CARS                  0.006   cysteinyl-tRNA synthetase isoform c 
CARS                  0.006   cysteinyl-tRNA synthetase isoform b 
VARS2                 0.003   valyl-tRNA synthetase 2, mitochondrial 
CARS2                 0.003   cysteinyl-tRNA synthetase 2, mitochondrial 
CHD4                  0.003   chromodomain helicase DNA binding protein 4 
SPARCL1               0.003   SPARC-like 1 
SPARCL1               0.003   SPARC-like 1 
PRKCSH                0.003   protein kinase C substrate 80K-H isoform 2 
PCM1                  0.003   pericentriolar material 1 
TULP1                 0.003   tubby like protein 1 
CENPF                 0.003   centromere protein F 
FAM161A               0.003   hypothetical protein LOC84140 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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