Guide to the Human Genome
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Name: CARS Sequence: fasta or formatted (726aa) NCBI GI: 21269877
Description:

cysteinyl-tRNA synthetase isoform a

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [748aa] cysteinyl-tRNA synthetase isoform b
alt prot [831aa] cysteinyl-tRNA synthetase isoform c
alt prot [738aa] cysteinyl-tRNA synthetase isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         52           2
 C cysteine            1.8         13           2
 D aspartate           6.2         45           2
 E glutamate           8.5         62           3
 F phenylalanine       4.3         31           2
 G glycine             5.4         39           3
 H histidine           2.6         19           2
 I isoleucine          3.6         26           2
 K lysine              8.4         61           3
 L leucine             9.6         70           2
 M methionine          2.6         19           1
 N asparagine          3.7         27           1
 P proline             4.7         34           2
 Q glutamine           3.9         28           2
 R arginine            5.8         42           2
 S serine              6.9         50           2
 T threonine           4.1         30           2
 V valine              6.2         45           2
 W tryptophan          1.7         12           1
 Y tyrosine            2.9         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteinyl-tRNA synthetase isoform a 
CARS                  0.968   cysteinyl-tRNA synthetase isoform b 
CARS                  0.957   cysteinyl-tRNA synthetase isoform c 
CARS                  0.912   cysteinyl-tRNA synthetase isoform d 
CARS2                 0.149   cysteinyl-tRNA synthetase 2, mitochondrial 
UPF2                  0.014   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.014   UPF2 regulator of nonsense transcripts homolog [Homo...
TAF3                  0.011   RNA polymerase II transcription factor TAFII140 [Ho...
MAP4K4                0.011   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.011   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.011   mitogen-activated protein kinase kinase kinase kinas...
GIGYF2                0.011   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.011   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.011   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.011   GRB10 interacting GYF protein 2 isoform b 
LARS                  0.010   leucyl-tRNA synthetase 
ACBD3                 0.010   acyl-Coenzyme A binding domain containing 3 
WNK1                  0.009   WNK lysine deficient protein kinase 1 
BRD4                  0.009   bromodomain-containing protein 4 isoform short 
BRD4                  0.009   bromodomain-containing protein 4 isoform long 
CALD1                 0.009   caldesmon 1 isoform 5 
CALD1                 0.009   caldesmon 1 isoform 4 
CALD1                 0.009   caldesmon 1 isoform 3 
CALD1                 0.009   caldesmon 1 isoform 2 
CALD1                 0.009   caldesmon 1 isoform 1 
ZFC3H1                0.009   proline/serine-rich coiled-coil 2 
LOC283685             0.008   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC283685             0.008   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYO6                  0.008   myosin VI 
FYB                   0.008   FYN binding protein (FYB-120/130) isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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