Guide to the Human Genome
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Name: CARS2 Sequence: fasta or formatted (564aa) NCBI GI: 13375695
Description:

cysteinyl-tRNA synthetase 2, mitochondrial

Referenced in:

tRNA Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         57           2
 C cysteine            1.6          9           1
 D aspartate           5.3         30           2
 E glutamate           5.3         30           2
 F phenylalanine       4.3         24           2
 G glycine             9.0         51           2
 H histidine           3.2         18           2
 I isoleucine          5.1         29           2
 K lysine              5.0         28           1
 L leucine             9.2         52           3
 M methionine          2.0         11           1
 N asparagine          2.1         12           1
 P proline             4.6         26           2
 Q glutamine           4.4         25           2
 R arginine            6.6         37           2
 S serine              7.4         42           2
 T threonine           4.3         24           2
 V valine              5.7         32           2
 W tryptophan          2.0         11           1
 Y tyrosine            2.8         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cysteinyl-tRNA synthetase 2, mitochondrial 
CARS                  0.193   cysteinyl-tRNA synthetase isoform a 
CARS                  0.193   cysteinyl-tRNA synthetase isoform d 
CARS                  0.193   cysteinyl-tRNA synthetase isoform c 
CARS                  0.193   cysteinyl-tRNA synthetase isoform b 
LARS                  0.006   leucyl-tRNA synthetase 
LARS2                 0.006   leucyl-tRNA synthetase 2, mitochondrial precursor [Ho...
MARS2                 0.006   methionine-tRNA synthetase 2 precursor 
LOC100293516          0.004   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.004   PREDICTED: similar to zinc finger protein 587 [Homo...
LOC100288322          0.004   PREDICTED: hypothetical protein XP_002343703 
ZNF814                0.004   zinc finger protein 814 
MEPE                  0.004   matrix, extracellular phosphoglycoprotein with ASARM ...
PEX7                  0.004   peroxisomal biogenesis factor 7 
ZNF828                0.004   zinc finger protein 828 
ZNF552                0.004   zinc finger protein 552 
PLXDC2                0.004   plexin domain containing 2 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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