Guide to the Human Genome
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Name: CHAF1A Sequence: fasta or formatted (956aa) NCBI GI: 50513245
Description:

chromatin assembly factor 1, subunit A (p150)

Referenced in:

Histones, Related Proteins, and Modifying Enzymes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         63           2
 C cysteine            2.2         21           1
 D aspartate           6.7         64           5
 E glutamate          11.2        107           7
 F phenylalanine       3.1         30           2
 G glycine             6.9         66           3
 H histidine           1.9         18           1
 I isoleucine          3.0         29           2
 K lysine              9.0         86           4
 L leucine             8.1         77           2
 M methionine          1.5         14           1
 N asparagine          2.3         22           2
 P proline             7.0         67           2
 Q glutamine           5.1         49           3
 R arginine            6.9         66           3
 S serine              7.8         75           2
 T threonine           4.5         43           2
 V valine              4.5         43           2
 W tryptophan          0.9          9           1
 Y tyrosine            0.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   chromatin assembly factor 1, subunit A (p150) 
LOC100133599          0.031   PREDICTED: hypothetical protein 
LOC100133599          0.030   PREDICTED: hypothetical protein 
LOC100294088          0.029   PREDICTED: hypothetical protein, partial 
MAP7D1                0.028   MAP7 domain containing 1 
CALD1                 0.028   caldesmon 1 isoform 1 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.027   GRB10 interacting GYF protein 2 isoform b 
TCHH                  0.027   trichohyalin 
MAP7                  0.027   microtubule-associated protein 7 
LOC645202             0.025   PREDICTED: hypothetical protein LOC645202 
EIF5B                 0.025   eukaryotic translation initiation factor 5B 
INCENP                0.025   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.025   inner centromere protein antigens 135/155kDa isofor...
LOC283685             0.025   PREDICTED: golgi autoantigen, golgin subfamily a-li...
BAT2D1                0.025   HBxAg transactivated protein 2 
MAP7D2                0.025   MAP7 domain containing 2 
LOC283685             0.024   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MAP1B                 0.024   microtubule-associated protein 1B 
SFRS12                0.023   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.023   splicing factor, arginine/serine-rich 12 isoform b [...
ENAH                  0.023   enabled homolog isoform a 
ENAH                  0.023   enabled homolog isoform b 
LOC440243             0.023   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC727832             0.023   golgi autoantigen, golgin subfamily a-like 
MAP4K4                0.023   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.023   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.023   mitogen-activated protein kinase kinase kinase kinas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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