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Search of human proteins with 62240992
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62240992 cysteinyl-tRNA synthetase isoform c [Homo sapiens]
(831 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62240992 cysteinyl-tRNA synthetase isoform c [Homo sapiens] 1682 0.0
gi|10835051 cysteinyl-tRNA synthetase isoform b [Homo sapiens] 1501 0.0
gi|62240994 cysteinyl-tRNA synthetase isoform d [Homo sapiens] 1436 0.0
gi|21269877 cysteinyl-tRNA synthetase isoform a [Homo sapiens] 1414 0.0
gi|13375695 cysteinyl-tRNA synthetase 2, mitochondrial [Homo sap... 241 2e-63
gi|11136628 eukaryotic translation elongation factor 1 beta 2 [H... 52 2e-06
gi|4503477 eukaryotic translation elongation factor 1 beta 2 [Ho... 52 2e-06
gi|83376130 eukaryotic translation elongation factor 1 beta 2 [H... 52 2e-06
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo... 45 3e-04
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo... 45 3e-04
gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-li... 43 0.001
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 42 0.002
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens] 42 0.003
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 42 0.003
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 42 0.003
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens] 42 0.003
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 42 0.003
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 41 0.004
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 41 0.004
gi|71061468 centromere protein E [Homo sapiens] 41 0.004
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 41 0.004
gi|22035602 mitogen-activated protein kinase kinase kinase kinas... 41 0.004
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 41 0.004
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 41 0.005
gi|12711676 UPF3 regulator of nonsense transcripts homolog A iso... 40 0.012
gi|18375525 UPF3 regulator of nonsense transcripts homolog A iso... 40 0.012
gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo sa... 39 0.015
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 39 0.015
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 39 0.015
gi|108773810 leucyl-tRNA synthetase [Homo sapiens] 39 0.020
>gi|62240992 cysteinyl-tRNA synthetase isoform c [Homo sapiens]
Length = 831
Score = 1682 bits (4357), Expect = 0.0
Identities = 831/831 (100%), Positives = 831/831 (100%)
Query: 1 MADSSGQQAPDYRSILSISDEAARAQALNEHLSTRSYVQGYSLSQADVDAFRQLSAPPAD 60
MADSSGQQAPDYRSILSISDEAARAQALNEHLSTRSYVQGYSLSQADVDAFRQLSAPPAD
Sbjct: 1 MADSSGQQAPDYRSILSISDEAARAQALNEHLSTRSYVQGYSLSQADVDAFRQLSAPPAD 60
Query: 61 PQLFHVARWFRHIEALLGSPCGKGQPCRLQASKGRRVQPQWSPPAGTQPCRLHLYNSLTR 120
PQLFHVARWFRHIEALLGSPCGKGQPCRLQASKGRRVQPQWSPPAGTQPCRLHLYNSLTR
Sbjct: 61 PQLFHVARWFRHIEALLGSPCGKGQPCRLQASKGRRVQPQWSPPAGTQPCRLHLYNSLTR 120
Query: 121 NKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITD 180
NKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITD
Sbjct: 121 NKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITD 180
Query: 181 IDDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQH 240
IDDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQH
Sbjct: 181 IDDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQH 240
Query: 241 AVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPK 300
AVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPK
Sbjct: 241 AVQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPK 300
Query: 301 FWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFAS 360
FWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFAS
Sbjct: 301 FWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFAS 360
Query: 361 SEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPW 420
SEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPW
Sbjct: 361 SEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPW 420
Query: 421 GKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHT 480
GKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHT
Sbjct: 421 GKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHT 480
Query: 481 GHLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEK 540
GHLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEK
Sbjct: 481 GHLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEK 540
Query: 541 FLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEE 600
FLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEE
Sbjct: 541 FLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEE 600
Query: 601 MRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTS 660
MRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTS
Sbjct: 601 MRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTS 660
Query: 661 LSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPT 720
LSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPT
Sbjct: 661 LSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPT 720
Query: 721 VVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDK 780
VVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDK
Sbjct: 721 VVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDK 780
Query: 781 YSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 831
YSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ
Sbjct: 781 YSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 831
>gi|10835051 cysteinyl-tRNA synthetase isoform b [Homo sapiens]
Length = 748
Score = 1501 bits (3885), Expect = 0.0
Identities = 740/742 (99%), Positives = 740/742 (99%)
Query: 90 QASKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMG 149
Q KGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMG
Sbjct: 7 QQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMG 66
Query: 150 HARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLL 209
HARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLL
Sbjct: 67 HARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLL 126
Query: 210 EDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVL 269
EDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVL
Sbjct: 127 EDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVL 186
Query: 270 LEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVP 329
LEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVP
Sbjct: 187 LEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVP 246
Query: 330 EIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSI 389
EIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSI
Sbjct: 247 EIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSI 306
Query: 390 SADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGG 449
SADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGG
Sbjct: 307 SADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGG 366
Query: 450 FDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHSA 509
FDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHSA
Sbjct: 367 FDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHSA 426
Query: 510 RQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEE 569
RQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEE
Sbjct: 427 RQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEE 486
Query: 570 EAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLEN 629
EAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLEN
Sbjct: 487 EAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLEN 546
Query: 630 IALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQK 689
IALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQK
Sbjct: 547 IALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQK 606
Query: 690 VPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKE 749
VPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKE
Sbjct: 607 VPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKE 666
Query: 750 EAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKK 809
EAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKK
Sbjct: 667 EAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKK 726
Query: 810 LFEAQEKLYKEYLQMAQNGSFQ 831
LFEAQEKLYKEYLQMAQNGSFQ
Sbjct: 727 LFEAQEKLYKEYLQMAQNGSFQ 748
>gi|62240994 cysteinyl-tRNA synthetase isoform d [Homo sapiens]
Length = 738
Score = 1436 bits (3716), Expect = 0.0
Identities = 710/710 (100%), Positives = 710/710 (100%)
Query: 122 KEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDI 181
KEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDI
Sbjct: 29 KEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDI 88
Query: 182 DDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHA 241
DDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHA
Sbjct: 89 DDKIIKRARQNHLFEQYREKRPEAAQLLEDVQAALKPFSVKLNETTDPDKKQMLERIQHA 148
Query: 242 VQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKF 301
VQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKF
Sbjct: 149 VQLATEPLEKAVQSRLTGEEVNSCVEVLLEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKF 208
Query: 302 WEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASS 361
WEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASS
Sbjct: 209 WEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASS 268
Query: 362 EKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWG 421
EKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWG
Sbjct: 269 EKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWG 328
Query: 422 KGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTG 481
KGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTG
Sbjct: 329 KGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTG 388
Query: 482 HLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKF 541
HLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKF
Sbjct: 389 HLTIAGCKMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEKF 448
Query: 542 LNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEM 601
LNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEM
Sbjct: 449 LNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALCDNVDTRTVMEEM 508
Query: 602 RALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSL 661
RALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSL
Sbjct: 509 RALVSQCNLYMAARKAVRKRPNQALLENIALYLTHMLKIFGAVEEDSSLGFPVGGPGTSL 568
Query: 662 SLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTV 721
SLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTV
Sbjct: 569 SLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTV 628
Query: 722 VKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKY 781
VKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKY
Sbjct: 629 VKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKY 688
Query: 782 SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 831
SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ
Sbjct: 689 SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 738
>gi|21269877 cysteinyl-tRNA synthetase isoform a [Homo sapiens]
Length = 726
Score = 1414 bits (3659), Expect = 0.0
Identities = 696/698 (99%), Positives = 696/698 (99%)
Query: 90 QASKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMG 149
Q KGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMG
Sbjct: 7 QQGKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMG 66
Query: 150 HARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLL 209
HARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLL
Sbjct: 67 HARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQLL 126
Query: 210 EDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVL 269
EDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVL
Sbjct: 127 EDVQAALKPFSVKLNETTDPDKKQMLERIQHAVQLATEPLEKAVQSRLTGEEVNSCVEVL 186
Query: 270 LEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVP 329
LEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVP
Sbjct: 187 LEEAKDLLSDWLDSTLGCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVP 246
Query: 330 EIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSI 389
EIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSI
Sbjct: 247 EIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSI 306
Query: 390 SADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGG 449
SADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGG
Sbjct: 307 SADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGG 366
Query: 450 FDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHSA 509
FDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHSA
Sbjct: 367 FDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALKKHSA 426
Query: 510 RQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEE 569
RQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEE
Sbjct: 427 RQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEE 486
Query: 570 EAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLEN 629
EAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLEN
Sbjct: 487 EAELNKNFYDKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLEN 546
Query: 630 IALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQK 689
IALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQK
Sbjct: 547 IALYLTHMLKIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQK 606
Query: 690 VPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKE 749
VPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKE
Sbjct: 607 VPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKE 666
Query: 750 EAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 787
EAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN
Sbjct: 667 EAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 704
>gi|13375695 cysteinyl-tRNA synthetase 2, mitochondrial [Homo
sapiens]
Length = 564
Score = 241 bits (615), Expect = 2e-63
Identities = 165/454 (36%), Positives = 229/454 (50%), Gaps = 53/454 (11%)
Query: 296 SKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY-VSNGSVYFD 354
+ L +E DF +DM AL VLPP V RV+E +P+I++F++ I+ G Y + G+VYFD
Sbjct: 137 ASLASLYEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFD 196
Query: 355 TAKFASSEKHSYGKLV---PEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKP 411
S YGKLV P VG+ AD S+KR +DFALWKA+KP
Sbjct: 197 L----KSRGDKYGKLVGVVPGPVGEP-------------AD--SDKRHASDFALWKAAKP 237
Query: 412 GEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFEND 471
E W PWG GRPGWHIECSA+A + G+ +DIH GG DL FPHH+NE+AQ E + + +
Sbjct: 238 QEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHHENEIAQCEVFHQCE 297
Query: 472 CWVRYFLHTGHLTIAGC--KMSKSLKNFITIKDALKKHSARQLRLAFLMHSWKDTLDYSS 529
W YFLH+GHL G KMSKSLKN+ITIKD LK S R L S++ +DYS
Sbjct: 298 QWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKTFSPDVFRFFCLRSSYRSAIDYSD 357
Query: 530 NTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFYDKKTAIHKALC 589
+ M A Q L F + + ++ GQ EA L + K A+ AL
Sbjct: 358 SAMLQAQQLLLGLGSFLEDARAYMK------GQLACGSVREAMLWERLSSTKRAVKAALA 411
Query: 590 DNVDTRTVMEEMRALVSQCNLYMAARKAVRKRP-NQALLENIALYLTHMLKIFGAVEEDS 648
D+ DT V++ + L N + A + P + A+ I Y + G +
Sbjct: 412 DDFDTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVFGAIISYFEQFFETVGISLANQ 471
Query: 649 SLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKI----------AREQKVPE---ILQ 695
V G G+ EAT+ + L FR+ VR+ AR Q++ E +L+
Sbjct: 472 QY---VSGDGS----EATLHGVVDELVRFRQKVRQFALAMPEATGDARRQQLLERQPLLE 524
Query: 696 LSDALRDNILPELGVRFEDHEGLPTVVKLVDRNT 729
D LR + G+ +D + +L+D+ T
Sbjct: 525 ACDTLRRGLTAH-GINIKDRSSTTSTWELLDQRT 557
Score = 97.8 bits (242), Expect = 4e-20
Identities = 54/123 (43%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 73 IEALLG-SPCGKGQPCRLQASKGRRVQPQWSPPAGTQPCRLHLYNSLTRNKEVFIPQDGK 131
++A LG G P AS GR W P G + + +YNSLT KE I +
Sbjct: 15 LQAALGLGRAGWHWPAGRAASGGRG--RAWLQPTGRET-GVQVYNSLTGRKEPLIVAHAE 71
Query: 132 KVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFDVFYCMNITDIDDKIIKRARQ 191
+WY CGPTVYD +H+GHA SY+ FDI+RR+L F + M ITD+DDKIIKRA +
Sbjct: 72 AASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANE 131
Query: 192 NHL 194
++
Sbjct: 132 MNI 134
>gi|11136628 eukaryotic translation elongation factor 1 beta 2
[Homo sapiens]
Length = 225
Score = 52.4 bits (124), Expect = 2e-06
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 23 ARAQALNEHLSTRSYVQGYSLSQADVDAFRQLSAPPADPQLFHVARWFRHIEA 75
A Q LN++L+ +SY++GY SQADV F +S+PP L H RW+ HI++
Sbjct: 10 AGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPP-PADLCHALRWYNHIKS 61
>gi|4503477 eukaryotic translation elongation factor 1 beta 2
[Homo sapiens]
Length = 225
Score = 52.4 bits (124), Expect = 2e-06
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 23 ARAQALNEHLSTRSYVQGYSLSQADVDAFRQLSAPPADPQLFHVARWFRHIEA 75
A Q LN++L+ +SY++GY SQADV F +S+PP L H RW+ HI++
Sbjct: 10 AGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPP-PADLCHALRWYNHIKS 61
>gi|83376130 eukaryotic translation elongation factor 1 beta 2
[Homo sapiens]
Length = 225
Score = 52.4 bits (124), Expect = 2e-06
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 23 ARAQALNEHLSTRSYVQGYSLSQADVDAFRQLSAPPADPQLFHVARWFRHIEA 75
A Q LN++L+ +SY++GY SQADV F +S+PP L H RW+ HI++
Sbjct: 10 AGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSSPP-PADLCHALRWYNHIKS 61
>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 45.1 bits (105), Expect = 3e-04
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMK 767
KE EEK++ +EE+RKK+EE A+R+QE+EAA K K
Sbjct: 89 KEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEK 124
Score = 38.1 bits (87), Expect = 0.034
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 687 EQKVPEILQLSDALRDNILPELGVR--FEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEK 744
E+K P ++ D+L +N + R E +KL + + K E+K++ E+
Sbjct: 4 ERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDD 63
Query: 745 RKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQA 804
++KKE+ R+K+++E K + E E ++ K E + + K + +A
Sbjct: 64 KRKKEDKERKKKDEEKVKAEE------ESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEA 117
Query: 805 KKLKKLFEAQEKLYKE 820
K E +L++E
Sbjct: 118 AAQMKEKEESIQLHQE 133
>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
sapiens]
Length = 1272
Score = 45.1 bits (105), Expect = 3e-04
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMK 767
KE EEK++ +EE+RKK+EE A+R+QE+EAA K K
Sbjct: 89 KEEEEKKKHQEEERKKQEEQAKRQQEEEAAAQMKEK 124
Score = 38.1 bits (87), Expect = 0.034
Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 687 EQKVPEILQLSDALRDNILPELGVR--FEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEK 744
E+K P ++ D+L +N + R E +KL + + K E+K++ E+
Sbjct: 4 ERKKPASMEEKDSLPNNKEKDCSERRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDD 63
Query: 745 RKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQA 804
++KKE+ R+K+++E K + E E ++ K E + + K + +A
Sbjct: 64 KRKKEDKERKKKDEEKVKAEE------ESKKKEEEEKKKHQEEERKKQEEQAKRQQEEEA 117
Query: 805 KKLKKLFEAQEKLYKE 820
K E +L++E
Sbjct: 118 AAQMKEKEESIQLHQE 133
>gi|239756241 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 899
Score = 42.7 bits (99), Expect = 0.001
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 9/123 (7%)
Query: 705 LPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLA 764
LPE + +HE + K+ ++ ++++EEK R +EEK + +EE R ++E+ +
Sbjct: 770 LPEQKEKLWEHEKMQEQEKIWEQEEKMRDQEEKMRGQEEKMRGQEEKMRGQEEKMWGQEE 829
Query: 765 KMKIPPSEMFLSETDKYSKFDE-----NGLPTHDMEGKELSKGQAKKLK----KLFEAQE 815
KM +M+ E + + ++ G E +E +GQ +K++ K+ +E
Sbjct: 830 KMWGQEEKMWGQEEKMWGQEEKMEEKMQGQEEKMREQEEKMRGQEEKMREQEEKMRGQEE 889
Query: 816 KLY 818
K+Y
Sbjct: 890 KIY 892
Score = 38.1 bits (87), Expect = 0.034
Identities = 28/116 (24%), Positives = 60/116 (51%), Gaps = 7/116 (6%)
Query: 713 EDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSE 772
+ E + ++ +R ++E EE R +EEK +K+EE EQE + + ++P +
Sbjct: 441 DQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEE---NMWEQEEKEWQQQRLPEQK 497
Query: 773 MFLSETDKYSKFDENGLPTHD-MEGKELSKGQAKKL---KKLFEAQEKLYKEYLQM 824
L E +K + +E + + +E GQ KK+ +K+ E +++++++ +M
Sbjct: 498 EKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKM 553
Score = 36.6 bits (83), Expect = 0.098
Identities = 30/108 (27%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 725 VDRNTLLKE---REEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMF-----LS 776
V NTL +E +EE+ R +E+K +K+EE R++E+ + KM+ +M+ L
Sbjct: 265 VQTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMWRQEKRLR 324
Query: 777 ETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQM 824
E +K + E L E +E + ++ +K++E +EK+ ++ +M
Sbjct: 325 EQEKELREQEKEL-REQKELREQEEQMQEQEEKMWEQEEKMREQEEKM 371
Score = 36.6 bits (83), Expect = 0.098
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Query: 713 EDHEGLPTVVKLVDRNTLLKEREEKRRVEEE-----KRKKKEEAARRKQEQEAAKLAKMK 767
E E L K+ ++ + E+EEK R +EE K+ ++E R +++Q + KM+
Sbjct: 495 EQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMR 554
Query: 768 IPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 826
+M+ E K E T D E K + + ++ +K +E++ +E + Q
Sbjct: 555 DQEQKMWDQEERMEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQ 613
Score = 36.2 bits (82), Expect = 0.13
Identities = 25/113 (22%), Positives = 59/113 (52%), Gaps = 6/113 (5%)
Query: 712 FEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPS 771
++ E + ++ +R ++E EE R +EEK +++EE + ++E+ + KM+
Sbjct: 579 WDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEE 638
Query: 772 EMFLSETDKYSK----FDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
+M+ E + + +++ LP + E K Q + +K+ E +EK++++
Sbjct: 639 KMWEQEEKMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQ--EKMQEQEEKIWEQ 689
Score = 36.2 bits (82), Expect = 0.13
Identities = 22/116 (18%), Positives = 57/116 (49%), Gaps = 8/116 (6%)
Query: 705 LPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLA 764
LPE + +HE + K+ ++ + E+E+ + +E+ KK + + ++E+ +
Sbjct: 660 LPEQKEKLWEHEKMQEQEKMQEQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMRERE 719
Query: 765 KMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
K EM + +K + +E + +E + ++ +K++E +EK++++
Sbjct: 720 KKMREEEEMMREQEEKMQEQEE--------KMQEQEEEMWEQEEKMWEQEEKMWEQ 767
Score = 35.8 bits (81), Expect = 0.17
Identities = 29/121 (23%), Positives = 62/121 (51%), Gaps = 6/121 (4%)
Query: 701 RDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARR----KQ 756
+D L E R + E + V+ + ++E+E+K R +EEK +++E R ++
Sbjct: 402 QDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEEKMQEEERIREREKKMRE 461
Query: 757 EQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEK 816
E+E + + K+ E + E ++ ++ + LP + E K Q ++ +K++E +EK
Sbjct: 462 EEETMREQEEKMQKQEENMWEQEE-KEWQQQRLPEQKEKLWEQEKMQEQE-EKIWEQEEK 519
Query: 817 L 817
+
Sbjct: 520 I 520
Score = 33.9 bits (76), Expect = 0.64
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 676 EFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKERE 735
+ RE R RE+K+ E + ++ E + ++ E K+ ++ + E+E
Sbjct: 584 KMREEERMREREKKMRE--------EEEMMREQEEKMQEQEE-----KMQEQEEKMWEQE 630
Query: 736 EKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDME 795
EK + +EEK ++EE + EQE + ++P + L E +K + ++ M+
Sbjct: 631 EKMQEQEEKMWEQEE---KMWEQEEKMWEQQRLPEQKEKLWEHEKMQEQEK-------MQ 680
Query: 796 GKELSKGQAKKLKKLFEAQEKLYKEYLQMAQNGSFQ 831
+E + +K++K + QEK + +M + S +
Sbjct: 681 EQEEKIWEQEKMEKKTQEQEKKTWDQEKMREEESMR 716
Score = 32.7 bits (73), Expect = 1.4
Identities = 23/107 (21%), Positives = 49/107 (45%), Gaps = 12/107 (11%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKY- 781
+L ++ ++E+E+K R +EE+ +++E R K+E ++ E + +K
Sbjct: 377 RLWEQEKQMREQEQKMRDQEERMWEQDERLREKEE---------RMREQEKMWEQVEKMR 427
Query: 782 --SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 826
K E T D E K + + ++ +K +E+ +E + Q
Sbjct: 428 EEKKMQEQEKKTRDQEEKMQEEERIREREKKMREEEETMREQEEKMQ 474
Score = 31.6 bits (70), Expect = 3.2
Identities = 24/122 (19%), Positives = 59/122 (48%), Gaps = 8/122 (6%)
Query: 711 RFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRK--------KKEEAARRKQEQEAAK 762
+ D E + K + R ++E+E++ +EEK + ++E ++ QEQE
Sbjct: 519 KIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMWDQEERMEKKTQEQEKKT 578
Query: 763 LAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYL 822
+ + E + E +K + +E + + + +E + ++ +K++E +EK+ ++
Sbjct: 579 WDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMQEQEEKMWEQEEKMQEQEE 638
Query: 823 QM 824
+M
Sbjct: 639 KM 640
Score = 31.2 bits (69), Expect = 4.1
Identities = 26/118 (22%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 713 EDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQE-----QEAAKLAKMK 767
E + L +L ++ ++E+EEK +EEK +++EE R++E ++ + + K
Sbjct: 332 EQEKELREQKELREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQK 391
Query: 768 IPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKL-----KKLFEAQEKLYKE 820
+ E + E D+ + E + + +++ K + +K KK + +EK+ +E
Sbjct: 392 MRDQEERMWEQDERLREKEERMREQEKMWEQVEKMREEKKMQEQEKKTRDQEEKMQEE 449
Score = 30.8 bits (68), Expect = 5.4
Identities = 25/117 (21%), Positives = 62/117 (52%), Gaps = 3/117 (2%)
Query: 704 ILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKL 763
+LP++ E +L ++ ++++EEK +EE R +++E R+QE++ +
Sbjct: 261 LLPQVQTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEE-RLREQEGKMREQEEKMWRQ 319
Query: 764 AKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
K ++ E L E +K + ++ L + + +E + ++ +K+ E +EK++++
Sbjct: 320 EK-RLREQEKELREQEKELR-EQKELREQEEQMQEQEEKMWEQEEKMREQEEKMWRQ 374
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 42.4 bits (98), Expect = 0.002
Identities = 24/115 (20%), Positives = 61/115 (53%)
Query: 712 FEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPS 771
++ E + ++ +R ++E EE R +EEK +++EE R ++E+ + KM+
Sbjct: 550 WDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEE 609
Query: 772 EMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 826
+M+ E + + +E+ + + E + ++ +K++E +EK+ ++ +M +
Sbjct: 610 KMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMRE 664
Score = 40.4 bits (93), Expect = 0.007
Identities = 31/132 (23%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
Query: 701 RDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQ---- 756
+D L E R + E + + + ++ERE+K R EEE +++EE ++++
Sbjct: 364 QDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMW 423
Query: 757 EQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHD-MEGKELSKGQAKKL---KKLFE 812
EQE + + ++P + L E +K + +E + + +E GQ KK+ +K+ E
Sbjct: 424 EQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMRE 483
Query: 813 AQEKLYKEYLQM 824
+++++++ +M
Sbjct: 484 QEDQMWEQEEKM 495
Score = 37.0 bits (84), Expect = 0.075
Identities = 23/89 (25%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 791
K REEK+ E+EK+ +E R++E+ + KM+ EM + +K + +E
Sbjct: 535 KMREEKKTQEQEKKTWDQEEKMREEERMREREKKMR-EEEEMMREQEEKMQEQEEKMREQ 593
Query: 792 HDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
+ ++ K Q ++ +K++E +EK++++
Sbjct: 594 EEKMWEQEEKMQEQE-EKMWEQEEKMWEQ 621
Score = 37.0 bits (84), Expect = 0.075
Identities = 22/99 (22%), Positives = 51/99 (51%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 782
K+ ++ ++E+EEK R +EEK + +EE R ++E+ + KM+ +M E +
Sbjct: 647 KMWEQEEKMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQEEKMWG 706
Query: 783 KFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEY 821
+ ++ M G+E + + ++++ E ++ E+
Sbjct: 707 QEEKMWGQEEKMWGQEEMREKEERIRDQKEKMQERLPEH 745
Score = 35.8 bits (81), Expect = 0.17
Identities = 34/142 (23%), Positives = 71/142 (50%), Gaps = 13/142 (9%)
Query: 686 REQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKE---REEKRRVEE 742
+ ++ E L+L+++ + I + E ++ V NTL +E +EE+ R +E
Sbjct: 188 KNAELQEKLRLAESEKSEIQLNVKELKRKLERAKFLLPQVQTNTLQEEMWRQEEELREQE 247
Query: 743 EKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDMEGKELSKG 802
+K +K+EE R++E+ + KM+ E ++ + E L + E +E K
Sbjct: 248 KKIRKQEEKMWRQEERLREQEGKMR---------EQEEKMRRQEKRLREQEKELREQEK- 297
Query: 803 QAKKLKKLFEAQEKLYKEYLQM 824
+ ++ KKL E +E++ ++ +M
Sbjct: 298 ELREQKKLREQEEQMQEQEEKM 319
Score = 34.7 bits (78), Expect = 0.37
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 731 LKEREEKRRVEEEKRKKKEEAARR-----KQEQEAAKLAKMKIPPSEMFLSETDKYSKFD 785
L+E+E+K R +EEK ++EE R ++++E + + ++ E L E +K + +
Sbjct: 243 LREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELR-E 301
Query: 786 ENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
+ L + + +E + ++ +K+ E +EK++++
Sbjct: 302 QKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQ 336
Score = 34.7 bits (78), Expect = 0.37
Identities = 25/100 (25%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 782
K+ ++ ++ E+EEK + +EEK ++EE R ++E+ + KM+ E + E ++
Sbjct: 626 KMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQ--GQEEKMREQEEKM 683
Query: 783 KFDENGLPTHDMEGKELSKGQAKKL----KKLFEAQEKLY 818
+ E + E +E +GQ +K+ +K++ +EK++
Sbjct: 684 QGQEEKM----REQEEKMRGQEEKMWGQEEKMWGQEEKMW 719
Score = 34.7 bits (78), Expect = 0.37
Identities = 21/98 (21%), Positives = 51/98 (52%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 782
K+ ++ ++E+EEK + +EEK +++EE + ++E+ + KM+ +M+ E +
Sbjct: 654 KMREQEEKMREQEEKMQGQEEKMREQEEKMQGQEEKMREQEEKMRGQEEKMWGQEEKMWG 713
Query: 783 KFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
+ ++ E +E + Q +K+++ E+ E
Sbjct: 714 QEEKMWGQEEMREKEERIRDQKEKMQERLPEHEERCSE 751
Score = 34.3 bits (77), Expect = 0.49
Identities = 33/151 (21%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 676 EFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKERE 735
+ RE R RE+K+ E ++ + + + E E K+ ++ ++E+E
Sbjct: 555 KMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEE------KMWEQEEKMQEQE 608
Query: 736 EKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDME 795
EK +EEK ++EE + ++++E + K+ E + E ++ + E + E
Sbjct: 609 EKMWEQEEKMWEQEEEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKM----RE 664
Query: 796 GKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 826
+E +GQ +K++ E +EK+ + +M +
Sbjct: 665 QEEKMQGQEEKMR---EQEEKMQGQEEKMRE 692
Score = 33.9 bits (76), Expect = 0.64
Identities = 24/105 (22%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAAR---RKQEQEAAKLAKMKIPPSEMFLSETD 779
++ +++ L+E+EE+ R E++K ++EE R + QEQE + + E + E +
Sbjct: 508 RMWEQDERLREKEERMR-EQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMRERE 566
Query: 780 KYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQM 824
K + +E + + + +E + ++ +K++E +EK+ ++ +M
Sbjct: 567 KKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKM 611
Score = 33.1 bits (74), Expect = 1.1
Identities = 25/108 (23%), Positives = 55/108 (50%), Gaps = 10/108 (9%)
Query: 713 EDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSE 772
E + L KL ++ ++E+EEK +EEK +++EE R++E ++ E
Sbjct: 294 EQEKELREQKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEE---------RLWEQE 344
Query: 773 MFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
+ E ++ + E + D +E + + ++ +K++E +EK+ +E
Sbjct: 345 KQMREQEQKMRDQEERMWEQDERLRE-KEERMREQEKMWEQEEKMQEE 391
Score = 33.1 bits (74), Expect = 1.1
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSE-TDKY 781
++ +++ L+E+EE+ R E+EK ++EE + QE+E + + K+ E + E +K
Sbjct: 360 RMWEQDERLREKEERMR-EQEKMWEQEE---KMQEEERIREREKKMREEEETMREQEEKM 415
Query: 782 SKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
K +EN + E KE + + + K+ QEK+ ++
Sbjct: 416 QKQEEN---MWEQEEKEWQQQRLPEQKEKLWEQEKMQEQ 451
Score = 30.8 bits (68), Expect = 5.4
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETD--K 780
K+ ++ + E+EEK R +E+K +EE + E+ K +M+ +M+ E +
Sbjct: 480 KMREQEDQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKEERMR-EQKKMWQQEEKMRE 538
Query: 781 YSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQ 826
K E T D E K + + ++ +K +E++ +E + Q
Sbjct: 539 EKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQ 584
>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
Length = 532
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 730 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 787
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 307 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 364
Query: 788 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 816
GL K + KG + K+++ E K
Sbjct: 365 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 394
Score = 30.4 bits (67), Expect = 7.1
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 791
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 261 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 315
Query: 792 HDMEGKELSKGQAKKLKKLFEAQEK 816
+E +E + Q + +KL E +EK
Sbjct: 316 KVLEEEEQRRKQEEADRKLREEEEK 340
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 730 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 787
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 333 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 390
Query: 788 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 816
GL K + KG + K+++ E K
Sbjct: 391 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 420
Score = 30.4 bits (67), Expect = 7.1
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 791
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 287 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 341
Query: 792 HDMEGKELSKGQAKKLKKLFEAQEK 816
+E +E + Q + +KL E +EK
Sbjct: 342 KVLEEEEQRRKQEEADRKLREEEEK 366
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 730 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 787
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 339 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 396
Query: 788 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 816
GL K + KG + K+++ E K
Sbjct: 397 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 426
Score = 30.4 bits (67), Expect = 7.1
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 791
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 293 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 347
Query: 792 HDMEGKELSKGQAKKLKKLFEAQEK 816
+E +E + Q + +KL E +EK
Sbjct: 348 KVLEEEEQRRKQEEADRKLREEEEK 372
>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
Length = 538
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 730 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 787
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 313 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 370
Query: 788 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 816
GL K + KG + K+++ E K
Sbjct: 371 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 400
Score = 30.4 bits (67), Expect = 7.1
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 791
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 267 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 321
Query: 792 HDMEGKELSKGQAKKLKKLFEAQEK 816
+E +E + Q + +KL E +EK
Sbjct: 322 KVLEEEEQRRKQEEADRKLREEEEK 346
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 730 LLKEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDEN 787
L K+REE+R+V EEE+R+K+EEA R+ +E+E + K +I +E K K E+
Sbjct: 568 LKKKREERRKVLEEEEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAE--KRQKMPED 625
Query: 788 GLPTHDMEGKELS-KGQAKKLKKLFEAQEK 816
GL K + KG + K+++ E K
Sbjct: 626 GLSDDKKPFKCFTPKGSSLKIEERAEFLNK 655
Score = 35.8 bits (81), Expect = 0.17
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 5/140 (3%)
Query: 686 REQKVPEILQLSDALRDNILPELGVRFEDHEG-LPTVVKLVDRNTLLKEREEKRRVEEEK 744
+E+ E +L R+ I E + D + K + +E EE+ R+ EE+
Sbjct: 262 KERAEAERARLEAEERERIKAEQDKKIADERARIEAEEKAAAQERERREAEERERMREEE 321
Query: 745 RKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDM----EGKELS 800
++ EE R K+E++ A + +I E +E + K +E E +E +
Sbjct: 322 KRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEEEEKA 381
Query: 801 KGQAKKLKKLFEAQEKLYKE 820
K + +K K E ++ +E
Sbjct: 382 KVEEQKRNKQLEEKKHAMQE 401
Score = 33.1 bits (74), Expect = 1.1
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 678 REGVRKIARE-QKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLV--DRNTLLKER 734
RE ++ A E Q++ E + + R I E E+ + + K +R E
Sbjct: 318 REEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRIKEEEKRAAEERQRARAEE 377
Query: 735 EEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDM 794
EEK +VEE+KR K+ E + ++ K K++ +++E K E+ L T +
Sbjct: 378 EEKAKVEEQKRNKQLEEKKHAMQETKIKGEKVEQKIEGKWVNE----KKAQEDKLQTAVL 433
Query: 795 EGKELSKG---QAKKLKKLFEAQEKLYKEYLQ 823
+ + KG QAK+ +KL E + KE ++
Sbjct: 434 KKQGEEKGTKVQAKR-EKLQEDKPTFKKEEIK 464
Score = 30.4 bits (67), Expect = 7.1
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 791
KE E +VE KR EE RR+ E E+ + K+K E L + K +E
Sbjct: 522 KEAEGAPQVEAGKRL--EELRRRRGETESEEFEKLKQKQQEAALELEELKKKREER---R 576
Query: 792 HDMEGKELSKGQAKKLKKLFEAQEK 816
+E +E + Q + +KL E +EK
Sbjct: 577 KVLEEEEQRRKQEEADRKLREEEEK 601
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 41.2 bits (95), Expect = 0.004
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 731 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLP 790
++EREEK + +EEK +++EE RR++E K KM+ EM + +K + +E
Sbjct: 297 IQEREEKIQEQEEKIREQEEKMRRQEEMMWEKEEKMR-RQEEMMWEKEEKIRELEEKMHE 355
Query: 791 THDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQ 823
+ +E + + +K+++ + QE+ K + Q
Sbjct: 356 QEKIREQEEKRQEEEKIREQEKRQEQEAKMWRQ 388
Score = 38.5 bits (88), Expect = 0.026
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 782
K+ ++ ++E+EEK R +EE +KEE RR++E K + KI E + E +K
Sbjct: 303 KIQEQEEKIREQEEKMRRQEEMMWEKEEKMRRQEEMMWEK--EEKIRELEEKMHEQEKIR 360
Query: 783 KFDENGLPTHDMEGKELSKGQAKKL----KKLFEAQEKLYKEYLQMAQ 826
+ +E + +E + Q K+ +K+ E +EK+ +E +M Q
Sbjct: 361 EQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKI-REQEEMMQ 407
Score = 37.4 bits (85), Expect = 0.058
Identities = 36/163 (22%), Positives = 81/163 (49%), Gaps = 13/163 (7%)
Query: 674 LSEFREGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKE 733
+ E E +R+ +E+K+ ++ + + + + +E E + + + + ++E
Sbjct: 304 IQEQEEKIRE--QEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEKIRE 361
Query: 734 REEKRRVEE---EKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLP 790
+EEKR+ EE E+ K++E+ A+ +++E + + KI E + E ++ E +
Sbjct: 362 QEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMW 421
Query: 791 THD---MEGKELSKGQAKKL----KKLFEAQEKLYKEYLQMAQ 826
+ E +E + Q +K+ KK+ E +EK+ +E +M Q
Sbjct: 422 EQEEEMQEQEEKMRRQEEKIREQEKKIREQEEKI-REQEEMMQ 463
Score = 36.2 bits (82), Expect = 0.13
Identities = 32/153 (20%), Positives = 75/153 (49%), Gaps = 23/153 (15%)
Query: 676 EFREGVRKIA-REQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKER 734
+ RE +KI +E+K+ E ++ ++ E + + EG K+ ++ ++E+
Sbjct: 440 KIREQEKKIREQEEKIRE--------QEEMMQEQEEKMGEQEG-----KMCEQEAKMQEQ 486
Query: 735 EEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDM 794
EEK R +EEK +++E+ R ++E KI E + E ++ E + +
Sbjct: 487 EEKMRRQEEKIREQEKKIREQEE---------KIREQEEMMQEQEEKMWEQEEKMCEQEE 537
Query: 795 EGKELSKGQAKKLKKLFEAQEKLYKEYLQMAQN 827
+ +E + ++ +K+ E + +L ++ +M ++
Sbjct: 538 KMQEQEEKMRRQEEKMREQEVRLRQQEEKMQEH 570
Score = 33.5 bits (75), Expect = 0.83
Identities = 21/98 (21%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS 782
K+ ++ ++E+EEK R +EEK +++E+ R ++E KI E + E ++
Sbjct: 419 KMWEQEEEMQEQEEKMRRQEEKIREQEKKIREQEE---------KIREQEEMMQEQEEKM 469
Query: 783 KFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
E + + + +E + ++ +K+ E ++K+ ++
Sbjct: 470 GEQEGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQ 507
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 41.2 bits (95), Expect = 0.004
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 699 ALRDNILPELGVR-FEDHEGLPTVVKLVDRNTLLKERE-EKRRVEEEKRKKKEEAARRKQ 756
A+ ++LP L + FE+ E + K D+ K++E EK + E+E+ K+K E +R++
Sbjct: 676 AMLPSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKEREKEKREREKREK 735
Query: 757 EQEAAKLAKMKIPP 770
E+E K K+K+ P
Sbjct: 736 EKEKHKHEKIKVEP 749
Score = 30.8 bits (68), Expect = 5.4
Identities = 36/166 (21%), Positives = 72/166 (43%), Gaps = 28/166 (16%)
Query: 678 REGVRKIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKERE-- 735
+E ++ RE K P + L++ + ++ E + VKL D + KE+E
Sbjct: 562 KEKDKETGRETKYP----WKEFLKEEEADPYKFKIKEFEDVDPKVKLKD-GLVRKEKEKH 616
Query: 736 -------EKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFL-----SETDKYSK 783
EK + +++KR+K++ + ++++ A + +PP E+ L + +
Sbjct: 617 KDKKKDREKGKKDKDKREKEKVKDKGREDKMKAPAPPLVLPPKELALPLFSPATASRVPA 676
Query: 784 FDENGLPT---------HDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
+ LP ++ KE K + +K KK + +EK KE
Sbjct: 677 MLPSLLPVLPEKLFEEKEKVKEKEKKKDKKEKKKKKEKEKEKKEKE 722
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 41.2 bits (95), Expect = 0.004
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 687 EQKVPEILQLSDALRDNILPELGVRFED-------HEGLPTVVKLVDRNTLLKEREEKRR 739
++KV E+ QL ++D L + E+ HE L + +++KER+ RR
Sbjct: 1843 QKKVSEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLE------EMKSVMKERDNLRR 1896
Query: 740 VEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYS------KFDENGLPTHD 793
VEE + ++++ QE +A L + + LS+ K + K E + D
Sbjct: 1897 VEETLKLERDQLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQISD 1956
Query: 794 MEGKELSKGQAKKLKKLFEAQEK 816
++ K+L K + + KK+ E Q+K
Sbjct: 1957 IQ-KDLDKSKDELQKKIQELQKK 1978
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 642 GAVEEDSSLGFPVGGPGTSLSL--EATVM-PYLQVLSEFREGVRKIAREQKVPEI-LQLS 697
G+ EE+ + G P + +++ E+T+ +L++ E +E + R+Q + E L+
Sbjct: 325 GSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQ 384
Query: 698 DALRDNILPELGVRFEDHEGLPTVV-----------KLVDRNTLLKEREEKRRVEEEKRK 746
+ + +L E R E + + + +R +E+EEKRR+EE +R+
Sbjct: 385 EEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERR 444
Query: 747 KKEEAARRKQEQEAAKLAK 765
+KEE RR+ E+E ++ +
Sbjct: 445 RKEEEERRRAEEEKRRVER 463
Score = 33.5 bits (75), Expect = 0.83
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 732 KEREEKRRVEEEKRK--KKEEAARRKQEQEAAKL 763
KE EE+RR EEEKR+ +++E RR+ E+E L
Sbjct: 446 KEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHL 479
Score = 32.0 bits (71), Expect = 2.4
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 731 LKEREEKRRVEEEKRKKKEEAARRKQEQE 759
L+E E +R+ EEE+R+ +EE R ++EQE
Sbjct: 438 LEELERRRKEEEERRRAEEEKRRVEREQE 466
>gi|22035602 mitogen-activated protein kinase kinase kinase kinase 4
isoform 1 [Homo sapiens]
Length = 1166
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 642 GAVEEDSSLGFPVGGPGTSLSL--EATVM-PYLQVLSEFREGVRKIAREQKVPEI-LQLS 697
G+ EE+ + G P + +++ E+T+ +L++ E +E + R+Q + E L+
Sbjct: 325 GSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQ 384
Query: 698 DALRDNILPELGVRFEDHEGLPTVV-----------KLVDRNTLLKEREEKRRVEEEKRK 746
+ + +L E R E + + + +R +E+EEKRR+EE +R+
Sbjct: 385 EEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERR 444
Query: 747 KKEEAARRKQEQEAAKLAK 765
+KEE RR+ E+E ++ +
Sbjct: 445 RKEEEERRRAEEEKRRVER 463
Score = 33.5 bits (75), Expect = 0.83
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 732 KEREEKRRVEEEKRK--KKEEAARRKQEQEAAKL 763
KE EE+RR EEEKR+ +++E RR+ E+E L
Sbjct: 446 KEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHL 479
Score = 32.0 bits (71), Expect = 2.4
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 731 LKEREEKRRVEEEKRKKKEEAARRKQEQE 759
L+E E +R+ EEE+R+ +EE R ++EQE
Sbjct: 438 LEELERRRKEEEERRRAEEEKRRVEREQE 466
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 642 GAVEEDSSLGFPVGGPGTSLSL--EATVM-PYLQVLSEFREGVRKIAREQKVPEI-LQLS 697
G+ EE+ + G P + +++ E+T+ +L++ E +E + R+Q + E L+
Sbjct: 325 GSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQ 384
Query: 698 DALRDNILPELGVRFEDHEGLPTVV-----------KLVDRNTLLKEREEKRRVEEEKRK 746
+ + +L E R E + + + +R +E+EEKRR+EE +R+
Sbjct: 385 EEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERR 444
Query: 747 KKEEAARRKQEQEAAKLAK 765
+KEE RR+ E+E ++ +
Sbjct: 445 RKEEEERRRAEEEKRRVER 463
Score = 33.5 bits (75), Expect = 0.83
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 732 KEREEKRRVEEEKRK--KKEEAARRKQEQEAAKL 763
KE EE+RR EEEKR+ +++E RR+ E+E L
Sbjct: 446 KEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHL 479
Score = 32.0 bits (71), Expect = 2.4
Identities = 14/29 (48%), Positives = 22/29 (75%)
Query: 731 LKEREEKRRVEEEKRKKKEEAARRKQEQE 759
L+E E +R+ EEE+R+ +EE R ++EQE
Sbjct: 438 LEELERRRKEEEERRRAEEEKRRVEREQE 466
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 40.8 bits (94), Expect = 0.005
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPT 791
KE+ +++R E+EK+KK +E +RK+++E K K K + E ++ + +E
Sbjct: 30 KEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKK----EEEEREEEEEEEEEE 85
Query: 792 HDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
+ E KE + + KK K+ + +E+ K+
Sbjct: 86 KEEEEKEEGRRRKKKKKRRRKEEEEEKKK 114
Score = 32.3 bits (72), Expect = 1.9
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMK 767
+E+EE+ + E +RKKK++ R+++E+E K + K
Sbjct: 84 EEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRK 119
Score = 30.8 bits (68), Expect = 5.4
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 732 KEREEKRRVEEEK---RKKKEEAARRKQEQEAAKLAKMK 767
+E EE+ + EEEK R++K++ RR++E+E K K +
Sbjct: 79 EEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRR 117
>gi|12711676 UPF3 regulator of nonsense transcripts homolog A
isoform hUpf3p [Homo sapiens]
Length = 476
Score = 39.7 bits (91), Expect = 0.012
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKL----AKMKIPPSEMFLSET 778
KL + ++REE+RR E EK++ +EE RR++E+E K + KI E+ +
Sbjct: 225 KLEKQRIREEKREERRRRELEKKRLREEEKRRRREEERCKKKETDKQKKIAEKEVRIKLL 284
Query: 779 DKYSKFDENGLPTHDMEGKELSKGQAKK 806
K K +E G+E+ G K+
Sbjct: 285 KKPEKGEEPTTEKPKERGEEIDTGGGKQ 312
>gi|18375525 UPF3 regulator of nonsense transcripts homolog A
isoform hUpf3pdelta [Homo sapiens]
Length = 443
Score = 39.7 bits (91), Expect = 0.012
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQEAAKL----AKMKIPPSEMFLSET 778
KL + ++REE+RR E EK++ +EE RR++E+E K + KI E+ +
Sbjct: 192 KLEKQRIREEKREERRRRELEKKRLREEEKRRRREEERCKKKETDKQKKIAEKEVRIKLL 251
Query: 779 DKYSKFDENGLPTHDMEGKELSKGQAKK 806
K K +E G+E+ G K+
Sbjct: 252 KKPEKGEEPTTEKPKERGEEIDTGGGKQ 279
>gi|15826852 acyl-Coenzyme A binding domain containing 3 [Homo
sapiens]
Length = 528
Score = 39.3 bits (90), Expect = 0.015
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 731 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETD-KYSKFDENGL 789
L++ EEKRR EEE+R ++EE RR+ E+E +L + K S+T ++ ++
Sbjct: 207 LQKEEEKRRREEEERLRREEEERRRIEEERLRLEQQKQQIMAALNSQTAVQFQQYAAQQY 266
Query: 790 PTHDMEGKELSKGQAKKLKKLFEAQEKLYKEYLQ 823
P + + + L + + QE+ Y++Y+Q
Sbjct: 267 PGNYEQQQILIR----------QLQEQHYQQYMQ 290
Score = 35.0 bits (79), Expect = 0.29
Identities = 17/30 (56%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Query: 732 KEREEKRRVEEEKRKK--KEEAARRKQEQE 759
KE EE+RR EEE+R++ KEE RR++E+E
Sbjct: 191 KEEEERRRREEEERERLQKEEEKRRREEEE 220
Score = 34.7 bits (78), Expect = 0.37
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 732 KEREEKRRVEEEKRKKKEEAARRKQEQEAAK 762
KE +EK+R EEE+R+++EE R + ++E K
Sbjct: 183 KEEQEKKRKEEEERRRREEEERERLQKEEEK 213
Score = 32.7 bits (73), Expect = 1.4
Identities = 14/39 (35%), Positives = 28/39 (71%), Gaps = 2/39 (5%)
Query: 732 KEREEKRRV--EEEKRKKKEEAARRKQEQEAAKLAKMKI 768
+E EE+ R+ EEEKR+++EE R++E+E ++ + ++
Sbjct: 199 REEEERERLQKEEEKRRREEEERLRREEEERRRIEEERL 237
Score = 31.2 bits (69), Expect = 4.1
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 741 EEEKRKKKEEAARRKQEQEAAKLAK 765
E+EK++K+EE RR++E+E +L K
Sbjct: 185 EQEKKRKEEEERRRREEEERERLQK 209
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 39.3 bits (90), Expect = 0.015
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQ--------EAAKLAKMKIPPSEMF 774
K + L ++RE++RR +E + +++ E RR+QE+ E + + + +E
Sbjct: 677 KAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERE 736
Query: 775 LSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
L E +K + + L E K+ + Q ++L E QEK KE
Sbjct: 737 LQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKE 782
Score = 38.1 bits (87), Expect = 0.034
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 683 KIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEE 742
K+ RE+++ ++LQ + + ++ E + + +D T E+ ++ R+ E
Sbjct: 571 KLKREERLRKVLQARERVEQ-------MKEEKKKQIEQKFAQIDEKT---EKAKEERLAE 620
Query: 743 EKRKKKEEA-------ARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDME 795
EK KKK A ARRKQE+EA +L ++ E E + K +E E
Sbjct: 621 EKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAE 680
Query: 796 GKELSKGQAKKLKKLFEAQEKLYKE 820
K L++ Q ++ ++ E +E+ +E
Sbjct: 681 AKRLAE-QREQERREQERREQERRE 704
Score = 31.2 bits (69), Expect = 4.1
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 722 VKLVDRNTLLKEREEKRRVEEEKRKKK-----------EEAARRKQEQEAAKLAKMKIPP 770
VKL L K + + RVE+ K +KK E+ + K+E+ A + AK K
Sbjct: 570 VKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAA 629
Query: 771 SEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKL-KKLFEAQEKLYK 819
+M E + K +E ++ +E + + L KK E QE+L K
Sbjct: 630 KKM--EEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRK 677
Score = 31.2 bits (69), Expect = 4.1
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 731 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLP 790
L++ E +R+ E++ +++ E RR+QE+ + + + E L+E ++ + +
Sbjct: 675 LRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAE 734
Query: 791 THDMEGKELSKGQAKKL------KKLFEAQEKLYKEYLQMAQ 826
E ++ + Q ++L KK E Q++L + LQ Q
Sbjct: 735 RELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQ 776
Score = 30.8 bits (68), Expect = 5.4
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 733 EREEKRRVEEEKRKKKEEAARRKQE------QEAAKLAKMKIPPSEMFLSETDKYSKFDE 786
E+ +++VEE+KR++ EE +++E Q ++ +MK + + + + E
Sbjct: 552 EQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTE 611
Query: 787 NGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
E K K AKK++++ EA+ K +E
Sbjct: 612 KAKEERLAEEKAKKKAAAKKMEEV-EARRKQEEE 644
Score = 30.4 bits (67), Expect = 7.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 711 RFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEE---AARRKQEQEAAKLAK 765
R + E L +L +R L+ ++E+ + E E++KKKEE A R+ ++E K AK
Sbjct: 724 RRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAK 781
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 39.3 bits (90), Expect = 0.015
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 723 KLVDRNTLLKEREEKRRVEEEKRKKKEEAARRKQEQ--------EAAKLAKMKIPPSEMF 774
K + L ++RE++RR +E + +++ E RR+QE+ E + + + +E
Sbjct: 673 KAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAERE 732
Query: 775 LSETDKYSKFDENGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
L E +K + + L E K+ + Q ++L E QEK KE
Sbjct: 733 LQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAKE 778
Score = 38.1 bits (87), Expect = 0.034
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 18/145 (12%)
Query: 683 KIAREQKVPEILQLSDALRDNILPELGVRFEDHEGLPTVVKLVDRNTLLKEREEKRRVEE 742
K+ RE+++ ++LQ + + ++ E + + +D T E+ ++ R+ E
Sbjct: 567 KLKREERLRKVLQARERVEQ-------MKEEKKKQIEQKFAQIDEKT---EKAKEERLAE 616
Query: 743 EKRKKKEEA-------ARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLPTHDME 795
EK KKK A ARRKQE+EA +L ++ E E + K +E E
Sbjct: 617 EKAKKKAAAKKMEEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRKAAE 676
Query: 796 GKELSKGQAKKLKKLFEAQEKLYKE 820
K L++ Q ++ ++ E +E+ +E
Sbjct: 677 AKRLAE-QREQERREQERREQERRE 700
Score = 31.2 bits (69), Expect = 4.1
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 14/110 (12%)
Query: 722 VKLVDRNTLLKEREEKRRVEEEKRKKK-----------EEAARRKQEQEAAKLAKMKIPP 770
VKL L K + + RVE+ K +KK E+ + K+E+ A + AK K
Sbjct: 566 VKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAA 625
Query: 771 SEMFLSETDKYSKFDENGLPTHDMEGKELSKGQAKKL-KKLFEAQEKLYK 819
+M E + K +E ++ +E + + L KK E QE+L K
Sbjct: 626 KKM--EEVEARRKQEEEARRLRWLQQEEEERRHQELLQKKKEEEQERLRK 673
Score = 31.2 bits (69), Expect = 4.1
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 731 LKEREEKRRVEEEKRKKKEEAARRKQEQEAAKLAKMKIPPSEMFLSETDKYSKFDENGLP 790
L++ E +R+ E++ +++ E RR+QE+ + + + E L+E ++ + +
Sbjct: 671 LRKAAEAKRLAEQREQERREQERREQERREQERREQERREQERQLAEQERRREQERLQAE 730
Query: 791 THDMEGKELSKGQAKKL------KKLFEAQEKLYKEYLQMAQ 826
E ++ + Q ++L KK E Q++L + LQ Q
Sbjct: 731 RELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQ 772
Score = 30.8 bits (68), Expect = 5.4
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 733 EREEKRRVEEEKRKKKEEAARRKQE------QEAAKLAKMKIPPSEMFLSETDKYSKFDE 786
E+ +++VEE+KR++ EE +++E Q ++ +MK + + + + E
Sbjct: 548 EQLRRQKVEEDKRRRLEEVKLKREERLRKVLQARERVEQMKEEKKKQIEQKFAQIDEKTE 607
Query: 787 NGLPTHDMEGKELSKGQAKKLKKLFEAQEKLYKE 820
E K K AKK++++ EA+ K +E
Sbjct: 608 KAKEERLAEEKAKKKAAAKKMEEV-EARRKQEEE 640
Score = 30.4 bits (67), Expect = 7.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 711 RFEDHEGLPTVVKLVDRNTLLKEREEKRRVEEEKRKKKEE---AARRKQEQEAAKLAK 765
R + E L +L +R L+ ++E+ + E E++KKKEE A R+ ++E K AK
Sbjct: 720 RRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKEEQQRLAERQLQEEQEKKAK 777
>gi|108773810 leucyl-tRNA synthetase [Homo sapiens]
Length = 1176
Score = 38.9 bits (89), Expect = 0.020
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 443 MDIHGGGFDLRFPHHDNELAQSEAYF--ENDCWVRYFLHTGHLTIAGCKMSKSLKNFITI 500
+D+ G DL H L A + ++D W GHL + KMSKS NF+T+
Sbjct: 668 VDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVRANGHLLLNSEKMSKSTGNFLTL 727
Query: 501 KDALKKHSARQLRLA 515
A+ K SA +RLA
Sbjct: 728 TQAIDKFSADGMRLA 742
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,487,475
Number of Sequences: 37866
Number of extensions: 1469268
Number of successful extensions: 14699
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 227
Number of HSP's that attempted gapping in prelim test: 9785
Number of HSP's gapped (non-prelim): 2825
length of query: 831
length of database: 18,247,518
effective HSP length: 111
effective length of query: 720
effective length of database: 14,044,392
effective search space: 10111962240
effective search space used: 10111962240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.