SEH1L 34045

Name: SEH1L	Sequence: fasta or formatted (421aa)		NCBI GI: 61743971
Description: sec13-like protein isoform 1		Referenced in: ER, Golgi, and the Secretory Pathway
Other entries for this name: alt prot [360aa] sec13-like protein isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 31 2 C cysteine 2.4 10 1 D aspartate 5.9 25 2 E glutamate 3.6 15 2 F phenylalanine 3.3 14 2 G glycine 5.9 25 2 H histidine 3.8 16 1 I isoleucine 4.5 19 1 K lysine 4.5 19 1 L leucine 6.7 28 2 M methionine 2.1 9 1 N asparagine 4.8 20 1 P proline 6.2 26 6 Q glutamine 3.1 13 2 R arginine 5.5 23 3 S serine 12.6 53 3 T threonine 5.9 25 2 V valine 6.7 28 1 W tryptophan 3.3 14 1 Y tyrosine 1.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sec13-like protein isoform 1 SEH1L 0.837 sec13-like protein isoform 2 SEC13 0.157 SEC13 protein isoform 1 SEC13 0.148 SEC13 protein isoform 2 WDR51B 0.057 WD repeat domain 51B PAFAH1B1 0.052 platelet-activating factor acetylhydrolase, isoform I... CIAO1 0.050 WD repeat domain 39 SPAG16 0.048 sperm associated antigen 16 isoform 1 APAF1 0.047 apoptotic peptidase activating factor 1 isoform d [H... APAF1 0.047 apoptotic peptidase activating factor 1 isoform b [Ho... APAF1 0.041 apoptotic peptidase activating factor 1 isoform c [H... APAF1 0.041 apoptotic peptidase activating factor 1 isoform a [Ho... TBL1Y 0.034 transducin beta-like 1Y TBL1Y 0.034 transducin beta-like 1Y TBL1Y 0.034 transducin beta-like 1Y TBL1X 0.033 transducin beta-like 1X isoform b TBL1X 0.033 transducin beta-like 1X isoform b TBL1X 0.033 transducin beta-like 1X isoform a TBL1X 0.033 transducin beta-like 1X isoform a WDR33 0.030 WD repeat domain 33 isoform 1 WDR88 0.030 PQQ repeat and WD repeat domain containing SNRNP40 0.029 WD repeat domain 57 (U5 snRNP specific) TBL1XR1 0.029 transducin (beta)-like 1 X-linked receptor 1 PEX7 0.029 peroxisomal biogenesis factor 7 NLE1 0.026 Notchless gene homolog isoform a WDR48 0.026 WD repeat domain 48 WDR5 0.023 WD repeat domain 5 WDR5 0.023 WD repeat domain 5 WDR51A 0.023 WD repeat domain 51A isoform 3 WDR51A 0.023 WD repeat domain 51A isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.