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Search of human proteins with 13569924
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13569924 hypothetical protein LOC81789 [Homo sapiens]
(521 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13569924 hypothetical protein LOC81789 [Homo sapiens] 1049 0.0
gi|22219477 tigger transposable element derived 4 [Homo sapiens] 287 2e-77
gi|21735415 centromere protein B [Homo sapiens] 202 5e-52
gi|22325392 tigger transposable element derived 7 [Homo sapiens] 190 3e-48
gi|22547224 jerky homolog-like [Homo sapiens] 178 1e-44
gi|23312392 tigger transposable element derived 2 [Homo sapiens] 164 2e-40
gi|22209001 hypothetical protein LOC200765 [Homo sapiens] 160 2e-39
gi|144922631 tigger transposable element derived 5 [Homo sapiens] 130 3e-30
gi|117938293 jerky isoform a [Homo sapiens] 129 6e-30
gi|117938295 jerky isoform b [Homo sapiens] 129 6e-30
gi|23312394 tigger transposable element derived 3 [Homo sapiens] 128 1e-29
gi|22027480 pogo transposable element with KRAB domain [Homo sap... 72 2e-12
gi|239755627 PREDICTED: similar to cag [Homo sapiens] 66 9e-11
gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo ... 66 9e-11
gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo ... 66 9e-11
gi|49619234 hypothetical protein LOC92806 [Homo sapiens] 52 2e-06
gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens] 32 1.4
gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens] 32 1.4
gi|239756639 PREDICTED: similar to hCG1802057 [Homo sapiens] 31 3.1
gi|239751125 PREDICTED: hypothetical protein XP_002347719 [Homo ... 31 3.1
gi|239745616 PREDICTED: hypothetical protein XP_002344143 [Homo ... 31 3.1
gi|73623035 sperm associated antigen 5 [Homo sapiens] 31 3.1
gi|213688415 coiled-coil domain containing 66 isoform 1 [Homo sa... 30 7.0
gi|213688413 coiled-coil domain containing 66 isoform 2 [Homo sa... 30 7.0
gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens] 30 7.0
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 30 7.0
gi|66932972 GTP cyclohydrolase 1 isoform 3 [Homo sapiens] 29 9.1
gi|66932970 GTP cyclohydrolase 1 isoform 2 [Homo sapiens] 29 9.1
gi|66932968 GTP cyclohydrolase 1 isoform 1 [Homo sapiens] 29 9.1
gi|4503949 GTP cyclohydrolase 1 isoform 1 [Homo sapiens] 29 9.1
>gi|13569924 hypothetical protein LOC81789 [Homo sapiens]
Length = 521
Score = 1049 bits (2712), Expect = 0.0
Identities = 521/521 (100%), Positives = 521/521 (100%)
Query: 1 MANKGNKKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVRE 60
MANKGNKKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVRE
Sbjct: 1 MANKGNKKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVRE 60
Query: 61 ASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQAS 120
ASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQAS
Sbjct: 61 ASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQAS 120
Query: 121 VGWLNRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADYSPDDIFNADE 180
VGWLNRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADYSPDDIFNADE
Sbjct: 121 VGWLNRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADYSPDDIFNADE 180
Query: 181 TGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKN 240
TGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKN
Sbjct: 181 TGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKN 240
Query: 241 IHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAHNMLPHLERIQV 300
IHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAHNMLPHLERIQV
Sbjct: 241 IHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAHNMLPHLERIQV 300
Query: 301 GYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAW 360
GYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAW
Sbjct: 301 GYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAW 360
Query: 361 WSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDF 420
WSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDF
Sbjct: 361 WSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDF 420
Query: 421 VTADDDLIISQDTDIIQDMVAGENTSEAGSEDEGEVSLPEQPKVTITEAISSVQKLRQFL 480
VTADDDLIISQDTDIIQDMVAGENTSEAGSEDEGEVSLPEQPKVTITEAISSVQKLRQFL
Sbjct: 421 VTADDDLIISQDTDIIQDMVAGENTSEAGSEDEGEVSLPEQPKVTITEAISSVQKLRQFL 480
Query: 481 STCVDIPDAIFGQLNGIDEYLMKRVTQTLIDSKITDFLQTK 521
STCVDIPDAIFGQLNGIDEYLMKRVTQTLIDSKITDFLQTK
Sbjct: 481 STCVDIPDAIFGQLNGIDEYLMKRVTQTLIDSKITDFLQTK 521
>gi|22219477 tigger transposable element derived 4 [Homo sapiens]
Length = 512
Score = 287 bits (734), Expect = 2e-77
Identities = 152/501 (30%), Positives = 286/501 (57%), Gaps = 16/501 (3%)
Query: 7 KKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQ 66
KK++ S+EEK+ ++ AV+SGK+K ++A E+GI ++LS+ +K++ K E P+
Sbjct: 16 KKKKSLSIEEKIDIINAVESGKKKAEIAAEYGIKKNSLSSIMKNKDKVLEAFESLRFDPK 75
Query: 67 RKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNR 126
RKR+R+A Y D+++A+ W++ N+ V G ++R KA + A LG+++F+ S GWL+R
Sbjct: 76 RKRLRTAFYTDLEEALMRWYRIAQCLNVPVNGPMLRLKANDFAQKLGHNDFKCSNGWLDR 135
Query: 127 FRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADYSPDDIFNADETGVFFQ 186
F+ R+G+ +A E + G+ +D W+ + + DY P ++FN ETG+ ++
Sbjct: 136 FKSRYGLVFRAQPVEAT-----GVPVDPSTVWYQNVLPYYLNDYHPKNVFNIKETGLLYR 190
Query: 187 LLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKNIHSLPC 246
+LP +T A KG+ C GK K R+T + N G+EK+ L++G+ +PHC K + SLP
Sbjct: 191 MLPTNTFAFKGETCSVGKLCKDRITLVVGTNMDGSEKLPLLVIGKKRTPHCFKGLKSLPV 250
Query: 247 DYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAHNMLPHLERIQVGYLPSN 306
Y AN+ AWMT D+F +W+ ++D + +RR+++ +++ AH + +L+ I++ + PS
Sbjct: 251 CYEANRMAWMTSDVFEQWMRKLDEEFQAQQRRVVIFVESFPAHPEVKNLKSIELAFFPSC 310
Query: 307 CTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEEVDIKQAIDMIAAAWWSVKPS 366
++ + G+I ++K+ Y+ L+K+ L + S+ + + A+D + W +V P
Sbjct: 311 LSSKCIAMKQGVIKSLKIKYRHCLIKKFLSSVEGSK-EFTFSLLDAVDTLHLCWRAVTPE 369
Query: 367 TVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDFVTADDD 426
T+VK +++AG + E D +A E D ++ + + P ++ +++ DDD
Sbjct: 370 TIVKSYEEAGFKSQK-GESDITNA--EKDTGLDLVADALGAGVEFPEGLSIEEYAALDDD 426
Query: 427 LIISQDTDIIQDMVAGENTS-EAG---SEDEGEVSLP--EQPKVTITEAISSVQKLRQFL 480
L + + E+ S E G S++E + P E P + +EAI+++ L++FL
Sbjct: 427 LETCEAAPNGDSICTKESKSDETGFYTSDEEDDDGSPGTELPLPSKSEAITALDTLKKFL 486
Query: 481 STCVDIPDAIFGQLNGIDEYL 501
+ D+ D + L ++ ++
Sbjct: 487 RS-QDMNDGLQNSLADLENFI 506
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 202 bits (515), Expect = 5e-52
Identities = 128/392 (32%), Positives = 202/392 (51%), Gaps = 30/392 (7%)
Query: 8 KRRQFSLEEKMKVVGAVDSGK--RKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGP 65
KRRQ + EK +++ V+ RKG++A+ F I PSTLST LK++ R+ V
Sbjct: 4 KRRQLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVAS 63
Query: 66 Q-RKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWL 124
RK + + YD ++ + AWFQ+I A + V G ++++KAL +A LG D+F AS GWL
Sbjct: 64 TCRKTNKLSPYDKLEGLLIAWFQQIRAAGLPVKGIILKEKALRIAEELGMDDFTASNGWL 123
Query: 125 NRFRDRHGIA-----LKAVCREDSDRL-----------MNGLGIDKINEWHAGEII--KL 166
+RFR RHG+ +A R + R G G W A E +
Sbjct: 124 DRFRRRHGVVSCSGVARARARNAAPRTPAAPASPAAVPSEGSG-GSTTGWRAREEQPPSV 182
Query: 167 IADYSPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRP 226
Y+ D+F+A ET +++ LP G R ++A QRL+ L C NA G+EK+ P
Sbjct: 183 AEGYASQDVFSATETSLWYDFLPDQAAGLCGGDGRP-RQATQRLSVLLCANADGSEKLPP 241
Query: 227 LIVGRSASPHCLKNIHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRAERRILLLIDNC 286
L+ G+SA P LPCDY AN +T ++L +D RM RR+LLL
Sbjct: 242 LVAGKSAKPRA--GQAGLPCDYTANSKGGVTTQALAKYLKALDTRMAAESRRVLLLAGRL 299
Query: 287 SAHNM-LPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQE 345
+A ++ L +Q+ + P + PL G++ +K Y+ +L + + L +
Sbjct: 300 AAQSLDTSGLRHVQLAFFP---PGTVHPLERGVVQQVKGHYRQAMLLKAMAALEGQDPSG 356
Query: 346 -EVDIKQAIDMIAAAWWSVKPSTVVKCWQKAG 376
++ + +A+ +AAAW +V+PS + C+++AG
Sbjct: 357 LQLGLTEALHFVAAAWQAVEPSDIAACFREAG 388
>gi|22325392 tigger transposable element derived 7 [Homo sapiens]
Length = 549
Score = 190 bits (482), Expect = 3e-48
Identities = 123/398 (30%), Positives = 204/398 (51%), Gaps = 35/398 (8%)
Query: 8 KRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASV---- 63
K +LEEKMKV+ +++G+ V EFGI+ ST K++ + V + +
Sbjct: 6 KYTTLNLEEKMKVLSRIEAGRSLKSVMDEFGISKSTFYDIKKNKKLILDFVLKQDMPLVG 65
Query: 64 GPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGW 123
+RKR A Y D+D AV+ W+Q+ + + V G ++ A A G +F+AS GW
Sbjct: 66 AEKRKRTTGAKYGDVDDAVYMWYQQKRSAGVPVRGVELQAAAERFARCFGRTDFKASTGW 125
Query: 124 LNRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADYSPDDIFNADETGV 183
L RFR+RH I + C E ++++ + + +I +++ DET +
Sbjct: 126 LFRFRNRHAIGNRKGCGE---QVLSSVSENVEPFRQKLSMIIKEEKLCLAQLYSGDETDL 182
Query: 184 FFQLLPQHTLAAKGDHCRGGKKA-KQRLTALFCCNASGTEKMRPLIVGRSASPHCLK-NI 241
F++ +P+++ A++ D C GKK K+RL+A C NA GT K++ +I+G+S P +K +
Sbjct: 183 FWKSMPENSQASRKDICLPGKKINKERLSAFLCANADGTHKLKSIIIGKSKLPKSVKEDT 242
Query: 242 HSLPCDYRANQWAWMTRDLFNEWLMQVDA-----------RMKRAERRILLLIDNCSAHN 290
+LP Y+ ++ W TR+LF+EW Q R + R LLL+D+C AH
Sbjct: 243 STLPVIYKPSKDVWFTRELFSEWFFQNFVPEVRHFQLNVLRFHDEDVRALLLLDSCPAHP 302
Query: 291 MLPHLE----RIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEE 346
L RI+ + P N + ++QP+N G+I + K LY+ L++ L+ S+D++E
Sbjct: 303 SSESLTSEDGRIKCMFFPHNTSTLIQPMNQGVILSCKRLYRWKQLEESLVIFEESDDEQE 362
Query: 347 -----------VDIKQAIDMIAAAWWSVKPSTVVKCWQ 373
+IK AI A +W VK T+ W+
Sbjct: 363 KGDKGVSKIKIYNIKSAIFNWAKSWEEVKQITIANAWE 400
>gi|22547224 jerky homolog-like [Homo sapiens]
Length = 524
Score = 178 bits (451), Expect = 1e-44
Identities = 141/514 (27%), Positives = 248/514 (48%), Gaps = 40/514 (7%)
Query: 5 GNKKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTK---FEEKVREA 61
G +KR ++++K+ ++ ++ G +A +GI +T+ K++ K +
Sbjct: 3 GKRKRVVLTIKDKLDIIKKLEDGGSSKQLAVIYGIGETTVRDIRKNKEKIITYASSSDST 62
Query: 62 SVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYD-NFQAS 120
S+ +RK M+ ++Y+++D+A+ WF + AK ++G + K+A LG D +F S
Sbjct: 63 SLLAKRKSMKPSMYEELDRAMLEWFNQQRAKGNPISGPICAKRAEFFFYALGMDGDFNPS 122
Query: 121 VGWLNRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIA--DYSPDDIFNA 178
GWL RF+ RH I RE + R G + E I + P+ I+NA
Sbjct: 123 AGWLTRFKQRHSI------REINIRNERLNGDETAVEDFCNNFRDFIERENLQPEQIYNA 176
Query: 179 DETGVFFQLLPQHTLAAKGD-HCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHC 237
DETG+F++ LP KG G K ++R+T + C NA+G K++ +VG++ P
Sbjct: 177 DETGLFWKCLPSRISVIKGKCTVPGHKSIEERVTIMCCANATGLHKLKLCVVGKAKKPRS 236
Query: 238 LKNIH--SLPCDYRANQWAWMTRDLFNEWLMQVDA-------RMKRAERRILLLIDNCSA 288
K+ +LP Y + + AWM +F +W ++ R K + + +LL+DN
Sbjct: 237 FKSTDTLNLPVSYFSQKGAWMDLSIFRQWFDKIFVPQVREYLRSKGLQEKAVLLLDNSPT 296
Query: 289 H---NMLPHLE-RIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSED- 343
H N+L + +I YLP N +++QP + G+I TMK Y++ LL+ L + N +
Sbjct: 297 HPNENVLRSDDGQIFAKYLPPNVASLIQPSDQGVIATMKRNYRAGLLQNNLEEGNDLKSF 356
Query: 344 QEEVDIKQAIDMIAAAWWSVKPSTVVKCWQKAGIVPM----EFAECDTESAASEPDIAIE 399
+++ + A+ IA AW VKP T+ + W+K I+PM E + D E + AI
Sbjct: 357 WKKLTLLDALYEIAMAWNLVKPVTISRAWKK--ILPMVEEKESLDFDVEDISVATVAAI- 413
Query: 400 KLWHTVAIA-TCVPNEVNFQDFVTADDDLIISQDTDIIQDMVAGENTSEAGSEDEGEVSL 458
L HT + N + + + + + D++II+ A E+ +E E+ L
Sbjct: 414 -LQHTKGLENVTTENLEKWLEVDSTEPGYEVLTDSEIIRR--AQGQADESSENEEEEIEL 470
Query: 459 PEQPKVTITEAISSVQKLRQFLSTCVD--IPDAI 490
+ + A+ + L +L D +PD +
Sbjct: 471 IPEKHINHAAALQWTENLLDYLEQQGDMILPDRL 504
>gi|23312392 tigger transposable element derived 2 [Homo sapiens]
Length = 525
Score = 164 bits (414), Expect = 2e-40
Identities = 110/396 (27%), Positives = 202/396 (51%), Gaps = 37/396 (9%)
Query: 5 GNKKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTK---FEEKVREA 61
G +KR ++++K+ ++ ++ G ++ +GI ST+ K++ + +
Sbjct: 3 GKRKRVVLTIKDKLDIIKKLEEGISFKKLSVVYGIGESTVRDIKKNKERIINYANSSDPT 62
Query: 62 SVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYD-NFQAS 120
S +RK M+S+ Y+++D+ + WF + I V+G++ K+A + LG + +F AS
Sbjct: 63 SGVSKRKSMKSSTYEELDRVMIEWFNQQKTDGIPVSGTICAKQAKFFFDALGMEGDFNAS 122
Query: 121 VGWLNRFRDRHGIALKAVCREDSDRLMNGLGID-KINEWHAGEIIKLIADY------SPD 173
GWL RF+ RHGI A G G K +E A E ++ P+
Sbjct: 123 SGWLTRFKQRHGIPKAA-----------GKGTKLKGDETAAREFCGSFQEFVEKENLQPE 171
Query: 174 DIFNADETGVFFQLLPQHTLAAKGDHCRGG-KKAKQRLTALFCCNASGTEKMRPLIVGRS 232
I+ AD+TG+F++ LP TL + D G + +++R+ + C NA+G K+ +VG++
Sbjct: 172 QIYGADQTGLFWKCLPSRTLTLETDQSTSGCRSSRERIIIMCCANATGLHKLNLCVVGKA 231
Query: 233 ASPHCLK--NIHSLPCDYRANQWAWMTRDLFNEWL-------MQVDARMKRAERRILLLI 283
P K ++ +LP Y + + AW+ + +F +W +Q + K + +LL+
Sbjct: 232 KKPRAFKGTDLSNLPVTYYSQKGAWIEQSVFRQWFEKYFVPQVQKHLKSKGLLEKAVLLL 291
Query: 284 DNCSAHNMLPHLE----RIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLN 339
D A L RI V YLP N T+++QP++ G++ T+K Y++ LL++ + + N
Sbjct: 292 DFPPARPNEEMLSSDDGRIIVKYLPPNVTSLIQPMSQGVLATVKRYYRAGLLQKYMDEGN 351
Query: 340 SSE-DQEEVDIKQAIDMIAAAWWSVKPSTVVKCWQK 374
+ + + + AI ++ AW VK ST+ K W+K
Sbjct: 352 DPKIFWKNLTVLDAIYEVSRAWNMVKSSTITKAWKK 387
>gi|22209001 hypothetical protein LOC200765 [Homo sapiens]
Length = 591
Score = 160 bits (406), Expect = 2e-39
Identities = 119/405 (29%), Positives = 202/405 (49%), Gaps = 46/405 (11%)
Query: 7 KKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQ 66
K R +L +K++++ + G K ++ + G+ T+S + + KF ++V+ A+ P
Sbjct: 10 KSRTSLTLNQKLEMIKLSEEGMSKAEIGRRLGLLRQTVSQVVNAKEKFLKEVKSAT--PM 67
Query: 67 RKRM---RSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANML--------GYD 115
RM R++L D++K + W ++ ++NI ++ S+I+ KAL L N + +
Sbjct: 68 NTRMIRKRNSLIADMEKVLVVWIEDQTSRNIPLSQSLIQNKALTLFNSMKAERGVEAAEE 127
Query: 116 NFQASVGWLNRFRDR-HGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIAD--YSP 172
F+AS GW RF++R H +KA S + + + K+I + Y+
Sbjct: 128 KFEASRGWFMRFKERSHFHNIKAQGEAASADVEAAASYPEA-------LAKIIDEGGYTK 180
Query: 173 DDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKA-KQRLTALFCCNASGTEKMRPLIVGR 231
IFN DET +++ +P T A+ + G KA K RLT L NA+G K++P+++
Sbjct: 181 QQIFNVDETAFYWKKMPSRTFIAREEKSVPGFKASKDRLTLLLGANAAGDFKLKPMLIYH 240
Query: 232 SASPHCLKNI--HSLPCDYRANQWAWMTRDLFNEWL-------MQVDARMKRAERRILLL 282
S +P LKN +LP Y+ N A MT LF W ++ K+ +ILLL
Sbjct: 241 SENPRALKNYTKSTLPVLYKWNSKARMTAHLFTAWFTEYFKPTVETYCSEKKIPFKILLL 300
Query: 283 IDNCSAH--NMLPHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNS 340
IDN +H ++ E I V ++P+N T++LQP++ G+I T K Y + + L ++S
Sbjct: 301 IDNAPSHPRALMEIYEEINVIFMPANTTSILQPMDQGVISTFKSYYLRNTFHKALAAMDS 360
Query: 341 --SEDQEEVDIK---------QAIDMIAAAWWSVKPSTVVKCWQK 374
S+ + +K AI I +W VK ST+ W+K
Sbjct: 361 DVSDGSGQSKLKTFWKGFTILDAIKNIRDSWEEVKLSTLTGVWKK 405
>gi|144922631 tigger transposable element derived 5 [Homo sapiens]
Length = 593
Score = 130 bits (327), Expect = 3e-30
Identities = 121/490 (24%), Positives = 220/490 (44%), Gaps = 76/490 (15%)
Query: 9 RRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVRE--ASVGPQ 66
R+ +S+++K++ + V G+R+ V ++FG+ TL +LKD K + + VG Q
Sbjct: 4 RKAYSIKDKLQAIERVKGGERQASVCRDFGVPGGTLRGWLKDEPKLRWFLEQLGGEVGTQ 63
Query: 67 RKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANML-GYD-NFQASVGWL 124
RK+MR A ++ID+AV+AWF + + ++G +I+ +A A + G + F+AS GW
Sbjct: 64 RKKMRLANEEEIDRAVYAWFLALRQHGVPLSGPLIQAQAEAFARQIYGPECTFKASHGWF 123
Query: 125 NRFRDRHGIALKAVCRE---------------DSDRLMNGLGIDKINEWHAGEIIKLIAD 169
R++ RHGI+ + E + L +G G + +
Sbjct: 124 WRWQKRHGISSQRFYGEAGPPAPSPAPGPPVKEEPALPSGAG--PLPDRAPAPPPPAEGG 181
Query: 170 YSPDDIFNADETGVFFQLLPQHTL-AAKGDHCRGG---KKAKQRLTALFCCNASGTEKMR 225
Y + I++A TG++++LLP+ GD GG + R+T L N +G+ K++
Sbjct: 182 YGDEQIYSASVTGLYWKLLPEQAAPPGAGDPGAGGCGRRWRGDRVTVLLAANLTGSHKLK 241
Query: 226 PLIVGRSASPHCLK--NIHSLPCDYRANQWAWMTRDLFNEWLMQ-----VDARMKRA--E 276
PL++GR P L+ N P YR + AW++R L W + V ++R+ +
Sbjct: 242 PLVIGRLPDPPSLRHHNQDKFPASYRYSPDAWLSRPLLRGWFFEEFVPGVKRYLRRSCLQ 301
Query: 277 RRILLLIDN---------------------CSAHNMLPHLE------RIQVGYLP--SNC 307
++ +LL+ + C + P E ++V +L S+
Sbjct: 302 QKAVLLVAHPPCPSPAASMPALDSEDAPVRCRPEPLGPPEELQTPDGAVRVLFLSKGSSR 361
Query: 308 TAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSS--EDQEEVDIKQAIDMIAAAWWSVKP 365
+ PL G++ K LY+ LL+ + + S + +K + + +W V+
Sbjct: 362 AHIPAPLEQGVVAAFKQLYKRELLRLAVSCASGSPLDFMRSFMLKDMLYLAGLSWDLVQA 421
Query: 366 STVVKCW---QKAGIVPMEFAECDTESA----ASEPDIAIEKLWHTVAIA--TCVPNEVN 416
++ +CW +A P + + A A+E + L H A+A P EV
Sbjct: 422 GSIERCWLLGLRAAFEPRPGEDSAGQPAQAEEAAEHSRVLSDLTHLAALAYKCLAPEEV- 480
Query: 417 FQDFVTADDD 426
+++ DDD
Sbjct: 481 -AEWLHLDDD 489
>gi|117938293 jerky isoform a [Homo sapiens]
Length = 568
Score = 129 bits (324), Expect = 6e-30
Identities = 96/395 (24%), Positives = 181/395 (45%), Gaps = 43/395 (10%)
Query: 3 NKGNKKRRQ-FSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRT---KFEEKV 58
++G K++R +L+EK+ + ++ G+ + + +E+ + STL + +F
Sbjct: 10 SRGEKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASS 69
Query: 59 REASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQ 118
QR+ + + + +D+ ++ WF ++ + V+G ++ +KA + Y+ Q
Sbjct: 70 DSNKALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDF-----YEQMQ 124
Query: 119 A------SVGWLNRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADY-- 170
S GWL RF+ RHGI E + E L A++
Sbjct: 125 LTEPCVFSGGWLWRFKARHGIKKLDASSEKQS------ADHQAAEQFCAFFRSLAAEHGL 178
Query: 171 SPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVG 230
S + ++NADETG+F++ LP T +G G K+ K RLT L C NA+G+ +++PL +G
Sbjct: 179 SAEQVYNADETGLFWRCLPNPT--PEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIG 236
Query: 231 RSASPHCLKNIHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKR---------AERRILL 281
+ + P K I LP Y+A AW+ +++F++W + R + + +L
Sbjct: 237 KCSGPRAFKGIQHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAVL 296
Query: 282 LIDNCSAHNMLPHL--ERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLN 339
L+D+ AH L + +LP++ +++QP+ GI + + I +
Sbjct: 297 LLDSSRAHPQEAELVSSNVFTIFLPASVASLVQPMEQGI-------RRDFMRNFINPPVP 349
Query: 340 SSEDQEEVDIKQAIDMIAAAWWSVKPSTVVKCWQK 374
++ AI +A AW +V + W+K
Sbjct: 350 LQGPHARYNMNDAIFSVACAWNAVPSHVFRRAWRK 384
>gi|117938295 jerky isoform b [Homo sapiens]
Length = 556
Score = 129 bits (324), Expect = 6e-30
Identities = 96/395 (24%), Positives = 181/395 (45%), Gaps = 43/395 (10%)
Query: 3 NKGNKKRRQ-FSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRT---KFEEKV 58
++G K++R +L+EK+ + ++ G+ + + +E+ + STL + +F
Sbjct: 10 SRGEKRKRVVLTLKEKIDICTRLEKGESRKALMQEYNVGMSTLYDIRAHKAQLLRFFASS 69
Query: 59 REASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQ 118
QR+ + + + +D+ ++ WF ++ + V+G ++ +KA + Y+ Q
Sbjct: 70 DSNKALEQRRTLHTPKLEHLDRVLYEWFLGKRSEGVPVSGPMLIEKAKDF-----YEQMQ 124
Query: 119 A------SVGWLNRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADY-- 170
S GWL RF+ RHGI E + E L A++
Sbjct: 125 LTEPCVFSGGWLWRFKARHGIKKLDASSEKQS------ADHQAAEQFCAFFRSLAAEHGL 178
Query: 171 SPDDIFNADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVG 230
S + ++NADETG+F++ LP T +G G K+ K RLT L C NA+G+ +++PL +G
Sbjct: 179 SAEQVYNADETGLFWRCLPNPT--PEGGAVPGPKQGKDRLTVLMCANATGSHRLKPLAIG 236
Query: 231 RSASPHCLKNIHSLPCDYRANQWAWMTRDLFNEWLMQVDARMKR---------AERRILL 281
+ + P K I LP Y+A AW+ +++F++W + R + + +L
Sbjct: 237 KCSGPRAFKGIQHLPVAYKAQGNAWVDKEIFSDWFHHIFVPSVREHFRTIGLPEDSKAVL 296
Query: 282 LIDNCSAHNMLPHL--ERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLN 339
L+D+ AH L + +LP++ +++QP+ GI + + I +
Sbjct: 297 LLDSSRAHPQEAELVSSNVFTIFLPASVASLVQPMEQGI-------RRDFMRNFINPPVP 349
Query: 340 SSEDQEEVDIKQAIDMIAAAWWSVKPSTVVKCWQK 374
++ AI +A AW +V + W+K
Sbjct: 350 LQGPHARYNMNDAIFSVACAWNAVPSHVFRRAWRK 384
>gi|23312394 tigger transposable element derived 3 [Homo sapiens]
Length = 471
Score = 128 bits (322), Expect = 1e-29
Identities = 123/496 (24%), Positives = 215/496 (43%), Gaps = 69/496 (13%)
Query: 1 MANKGNKKRRQFSLEEKMKVVGAVDSGKR-KGDVAKEFGITPSTLSTFLKDRTKFEEKVR 59
M KK SL EK++V+ +D K + +VA+ F ++ +S K++ K
Sbjct: 1 MELSSKKKLHALSLAEKIQVLELLDESKMSQSEVARRFQVSQPQISRICKNKEKLLADWC 60
Query: 60 EASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQA 119
+ +RKR R + Y ID+A+ W+ AK VTG ++ KA LA+++G D F
Sbjct: 61 SGTANRERKRKRESKYSGIDEALLCWYHIARAKAWDVTGPMLLHKAKELADIMGQD-FVP 119
Query: 120 SVGWLNRFRDRHGIALKA--VCREDSDRLMNGLGIDKINEWHAGEIIKLIADYSPDDIFN 177
S+GWL R++ R+ + A V G+ ++ + D+SP+D+F
Sbjct: 120 SIGWLVRWKRRNNVGFGARHVLAPSFPPEPPPPGLTS-----QAQLPLSLKDFSPEDVFG 174
Query: 178 ADETGVFFQLLPQHTLAAKGDHCRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHC 237
E + ++ +P G A ++ L C N+ GTEK R L+ G A+P C
Sbjct: 175 CAELPLLYRAVP------------GSFGACDQVQVLLCANSRGTEKRRVLLGGLQAAPRC 222
Query: 238 LKNIHS--LPCDYRANQW-AWMTRDLFNEWLMQVDARMKRAERRILLLIDNCSAHNM--L 292
I S LP Y + W+ EWL Q D M + R++ LL+ + L
Sbjct: 223 FFGIRSEALPASYHPDLGIPWL------EWLAQFDRDMGQQGRQVALLLAARVVEELAGL 276
Query: 293 PHLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQILLKLNSSEDQEE------ 346
P L +++ LP ++ PL ++ K Y+ LL + L + S D
Sbjct: 277 PGLYHVKL--LPLAASSTTPPLPSSVVRAFKAHYRHRLLGK-LAAIQSERDGTSLAEAGA 333
Query: 347 -VDIKQAIDMIAAAWWSVKPSTVVKCWQKAGIVPMEFAECDTESAASEPDIAIEKLWHTV 405
+ + A+ + +AAW V P + + + G+ P + +++ P
Sbjct: 334 GITVLDALHVASAAWAKVPPQLIFSSFIQEGLAPGKTPPSSHKTSEMPP----------- 382
Query: 406 AIATCVPNEVNFQDFVTADDDLIISQDTDII-QDMVAGENTSEAGSEDE-GEVSLPEQPK 463
VP ++ ++F S+ D+ ++ +G E G+EDE G+ +P
Sbjct: 383 -----VPGGLSLEEF---------SRFVDLEGEEPRSGVCKEEIGTEDEKGDREGAFEPL 428
Query: 464 VTITEAISSVQKLRQF 479
T +A+ ++ LR++
Sbjct: 429 PTKADALRALGTLRRW 444
>gi|22027480 pogo transposable element with KRAB domain [Homo
sapiens]
Length = 609
Score = 71.6 bits (174), Expect = 2e-12
Identities = 86/387 (22%), Positives = 170/387 (43%), Gaps = 29/387 (7%)
Query: 9 RRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEK--VREASVGPQ 66
RR + K+ VV +S AK+FG+ + + K + + + +R A GP
Sbjct: 197 RRSYDAGFKLMVVEYAES-TNNCQAAKQFGVLEKNVRDWRKVKPQLQNAHAMRRAFRGP- 254
Query: 67 RKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDN--FQASVGWL 124
K R AL +D+ V + + + AK +T ++ KAL +A + F+AS+GW
Sbjct: 255 -KNGRFAL---VDQRVAEYVRYMQAKGDPITREAMQLKALEIAQEMNIPEKGFKASLGWC 310
Query: 125 NRFRDRHGIALKAVCREDSDRLMNGLGIDKINEWHAGEIIKLIADYSPDDIFNADETGVF 184
R R+ ++L+ L L + + ++ DY + NADET +
Sbjct: 311 RRMMRRYDLSLRHKVPVPQ-HLPEDLTEKLVTYQRSVLALRRAHDYEVAQMGNADETPIC 369
Query: 185 FQLLPQHTLAAKGDH---CRGGKKAKQRLTALFCCNASGTEKMRPLIVGRSASPHCLKNI 241
++ + T+ +G+ + + K ++TA+ A G K+ P I+ R +
Sbjct: 370 LEVPSRVTVDNQGEKPVLVKTPGREKLKITAMLGVLADG-RKLPPYIILRGT--YIPPGK 426
Query: 242 HSLPCDYRANQWAWMTRDLFNEWLMQVDARMKRA--ERRILLLIDNCSAH------NMLP 293
+ R +++ WMT DL +WL V R A ++R +L+++ H N +
Sbjct: 427 FPSGMEIRCHRYGWMTEDLMQDWLEVVWRRRTGAVPKQRGMLILNGFRGHATDSVKNSME 486
Query: 294 HLERIQVGYLPSNCTAVLQPLNLGIIHTMKVLYQSHLLKQIL---LKLNSSEDQEEVDIK 350
+ V +P T+ LQ L++ + + ++ +L L L+ + + ++ +
Sbjct: 487 SMNTDMV-IIPGGLTSQLQVLDVVVYKPLNDSVRAQYSNWLLAGNLALSPTGNAKKPPLG 545
Query: 351 QAIDMIAAAWWSVKPSTVVKCWQKAGI 377
++ + AW S+ ++V+ ++K I
Sbjct: 546 LFLEWVMVAWNSISSESIVQGFKKCHI 572
>gi|239755627 PREDICTED: similar to cag [Homo sapiens]
Length = 392
Score = 65.9 bits (159), Expect = 9e-11
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 3 NKGNKKRRQ---FSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTK---FEE 56
N +KK+R+ S+ +K+K++ +DSG + +E+G+ +T+ K + K F
Sbjct: 54 NISDKKKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYA 113
Query: 57 KVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYD- 115
+ E + RK + A +D+D+ + W ++ ++++ + G +I K+A N L +
Sbjct: 114 ESDEQILMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEG 173
Query: 116 NFQASVGWLNRFRDRHGIALKAVC 139
N + S GWL +F+ RHGI C
Sbjct: 174 NCEYSTGWLQKFKKRHGIKFLKTC 197
>gi|239750125 PREDICTED: hypothetical protein XP_002347296 [Homo
sapiens]
Length = 392
Score = 65.9 bits (159), Expect = 9e-11
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 3 NKGNKKRRQ---FSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTK---FEE 56
N +KK+R+ S+ +K+K++ +DSG + +E+G+ +T+ K + K F
Sbjct: 54 NISDKKKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYA 113
Query: 57 KVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYD- 115
+ E + RK + A +D+D+ + W ++ ++++ + G +I K+A N L +
Sbjct: 114 ESDEQILMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEG 173
Query: 116 NFQASVGWLNRFRDRHGIALKAVC 139
N + S GWL +F+ RHGI C
Sbjct: 174 NCEYSTGWLQKFKKRHGIKFLKTC 197
>gi|239744433 PREDICTED: hypothetical protein XP_002343159 [Homo
sapiens]
Length = 392
Score = 65.9 bits (159), Expect = 9e-11
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 7/144 (4%)
Query: 3 NKGNKKRRQ---FSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTK---FEE 56
N +KK+R+ S+ +K+K++ +DSG + +E+G+ +T+ K + K F
Sbjct: 54 NISDKKKRKHLCLSIAQKVKLLEKLDSGVSVKHLTEEYGVGMTTIYDLKKQKDKLLKFYA 113
Query: 57 KVREASVGPQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYD- 115
+ E + RK + A +D+D+ + W ++ ++++ + G +I K+A N L +
Sbjct: 114 ESDEQILMKNRKTLHKAKNEDLDRVLKEWIRQRRSEHMPLNGMLIMKQAKIYHNELKIEG 173
Query: 116 NFQASVGWLNRFRDRHGIALKAVC 139
N + S GWL +F+ RHGI C
Sbjct: 174 NCEYSTGWLQKFKKRHGIKFLKTC 197
>gi|49619234 hypothetical protein LOC92806 [Homo sapiens]
Length = 187
Score = 51.6 bits (122), Expect = 2e-06
Identities = 31/133 (23%), Positives = 71/133 (53%), Gaps = 8/133 (6%)
Query: 7 KKRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFL--KDRTKFEEKVREASVG 64
++R+ +L+ K++V+ ++G++ +AK + ST++T K++ K ++
Sbjct: 17 RERKAITLDLKLEVLRRFEAGEKLSQIAKALDLAISTVATIRDSKEKIKASSQIATPLRA 76
Query: 65 PQRKRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKAL--NLANMLG----YDNFQ 118
+ R RSA+ + +++ + W ++ N ++ +++++KA +L G + F
Sbjct: 77 SRLTRHRSAVMESMEQLLSLWLEDQSQPNATLSAAIVQEKAEFDDLQREHGEGSQTERFH 136
Query: 119 ASVGWLNRFRDRH 131
AS GWL RF++ H
Sbjct: 137 ASQGWLVRFKECH 149
>gi|33239440 zinc finger protein, Y-linked isoform 1 [Homo sapiens]
Length = 801
Score = 32.0 bits (71), Expect = 1.4
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 395 DIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLIISQDTDIIQDMVAGENTSEAGSEDEG 454
D + ++ V ++ V +++ +FV D D ++ Q D+++D+V E+ + +E
Sbjct: 30 DQIVVEIQEAVFVSNIVDSDITVHNFVPDDPDSVVIQ--DVVEDVVIEEDVQCSDILEEA 87
Query: 455 EVS----LPEQP-KVTITEAIS 471
+VS +PEQ +TE +S
Sbjct: 88 DVSENVIIPEQVLDSDVTEEVS 109
>gi|223717965 zinc finger protein, Y-linked isoform 2 [Homo sapiens]
Length = 724
Score = 32.0 bits (71), Expect = 1.4
Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 395 DIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLIISQDTDIIQDMVAGENTSEAGSEDEG 454
D + ++ V ++ V +++ +FV D D ++ Q D+++D+V E+ + +E
Sbjct: 4 DQIVVEIQEAVFVSNIVDSDITVHNFVPDDPDSVVIQ--DVVEDVVIEEDVQCSDILEEA 61
Query: 455 EVS----LPEQP-KVTITEAIS 471
+VS +PEQ +TE +S
Sbjct: 62 DVSENVIIPEQVLDSDVTEEVS 83
>gi|239756639 PREDICTED: similar to hCG1802057 [Homo sapiens]
Length = 86
Score = 30.8 bits (68), Expect = 3.1
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 14 LEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSA 73
L EK++V+ + SG V E + ST+ K + VREA+ P + S
Sbjct: 3 LTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAA--PDSAEVTSI 60
Query: 74 LYDD-------IDKAVFAWFQEI 89
+ D+ ++K + W E+
Sbjct: 61 VRDEAMTKMEKMEKRLNLWIHEM 83
>gi|239751125 PREDICTED: hypothetical protein XP_002347719 [Homo
sapiens]
Length = 86
Score = 30.8 bits (68), Expect = 3.1
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 14 LEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSA 73
L EK++V+ + SG V E + ST+ K + VREA+ P + S
Sbjct: 3 LTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAA--PDSAEVTSI 60
Query: 74 LYDD-------IDKAVFAWFQEI 89
+ D+ ++K + W E+
Sbjct: 61 VRDEAMTKMEKMEKRLNLWIHEM 83
>gi|239745616 PREDICTED: hypothetical protein XP_002344143 [Homo
sapiens]
Length = 86
Score = 30.8 bits (68), Expect = 3.1
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 9/83 (10%)
Query: 14 LEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQRKRMRSA 73
L EK++V+ + SG V E + ST+ K + VREA+ P + S
Sbjct: 3 LTEKVRVLDKLQSGMSYSAVGHELNVNESTIRYIKKKEKEIHRSVREAA--PDSAEVTSI 60
Query: 74 LYDD-------IDKAVFAWFQEI 89
+ D+ ++K + W E+
Sbjct: 61 VRDEAMTKMEKMEKRLNLWIHEM 83
>gi|73623035 sperm associated antigen 5 [Homo sapiens]
Length = 1193
Score = 30.8 bits (68), Expect = 3.1
Identities = 30/109 (27%), Positives = 42/109 (38%), Gaps = 17/109 (15%)
Query: 381 EFAECDTESAASEPDIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLIISQDTDIIQDMV 440
E C ES +S + E L VP+E N L +S T + D
Sbjct: 212 EQLHCSKESLSSRTEAVREDL---------VPSESNA---FLPSSVLWLSPSTALAADFR 259
Query: 441 AG-----ENTSEAGSEDEGEVSLPEQPKVTITEAISSVQKLRQFLSTCV 484
E E G+ +E E+ P PK + TE + V + LSTC+
Sbjct: 260 VNHVDPEEEIVEHGAMEEREMRFPTHPKESETEDQALVSSVEDILSTCL 308
>gi|213688415 coiled-coil domain containing 66 isoform 1 [Homo
sapiens]
Length = 948
Score = 29.6 bits (65), Expect = 7.0
Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 8 KRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQR 67
+RRQ LE + + V+ +RK + +E + K EE+ E + +R
Sbjct: 459 RRRQKQLEHQKAITAQVEEKRRKKQLEEE--------------QRKKEEQEEELRLAQER 504
Query: 68 KRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRF 127
+ M+ +DI K +++ + L + Q + R
Sbjct: 505 EEMQKQYEEDILK------------------QKQKEEIMTLKTNELFQTMQRAQELAQRL 546
Query: 128 RDRHGIALKAVCREDSDRLMNGLGIDKIN-EWHAGEI 163
+ I A D+ RL+ LG+D I E++A I
Sbjct: 547 KQEQRIRELAQKGHDTSRLIKNLGVDTIQMEYNASNI 583
>gi|213688413 coiled-coil domain containing 66 isoform 2 [Homo
sapiens]
Length = 914
Score = 29.6 bits (65), Expect = 7.0
Identities = 33/157 (21%), Positives = 59/157 (37%), Gaps = 33/157 (21%)
Query: 8 KRRQFSLEEKMKVVGAVDSGKRKGDVAKEFGITPSTLSTFLKDRTKFEEKVREASVGPQR 67
+RRQ LE + + V+ +RK + +E + K EE+ E + +R
Sbjct: 425 RRRQKQLEHQKAITAQVEEKRRKKQLEEE--------------QRKKEEQEEELRLAQER 470
Query: 68 KRMRSALYDDIDKAVFAWFQEIHAKNILVTGSVIRKKALNLANMLGYDNFQASVGWLNRF 127
+ M+ +DI K +++ + L + Q + R
Sbjct: 471 EEMQKQYEEDILK------------------QKQKEEIMTLKTNELFQTMQRAQELAQRL 512
Query: 128 RDRHGIALKAVCREDSDRLMNGLGIDKIN-EWHAGEI 163
+ I A D+ RL+ LG+D I E++A I
Sbjct: 513 KQEQRIRELAQKGHDTSRLIKNLGVDTIQMEYNASNI 549
>gi|22035679 AT rich interactive domain 4B isoform 2 [Homo sapiens]
Length = 1226
Score = 29.6 bits (65), Expect = 7.0
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 17/144 (11%)
Query: 332 KQILLKLNSSEDQEEVDIKQAIDMIAAAWWSVKPSTVVKCWQKAGIVPMEFAECDTESAA 391
K+I L NS E + K D+ W S++ W K + + F++ DTE+AA
Sbjct: 818 KRIKLLNNSDERLQNSRAKDRKDV----WSSIQGQ-----WPKKTLKEL-FSDSDTEAAA 867
Query: 392 SEP------DIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLIISQDTDIIQDMVAGENT 445
S P +A E L +C P+ + D I + T + D A +
Sbjct: 868 SPPHPAPEEGVAEESLQTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFPS 927
Query: 446 SEAGSEDEGEVSLPEQP-KVTITE 468
S + S + PE P VT+TE
Sbjct: 928 SGSNSVLNTPPTTPESPSSVTVTE 951
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 29.6 bits (65), Expect = 7.0
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 17/144 (11%)
Query: 332 KQILLKLNSSEDQEEVDIKQAIDMIAAAWWSVKPSTVVKCWQKAGIVPMEFAECDTESAA 391
K+I L NS E + K D+ W S++ W K + + F++ DTE+AA
Sbjct: 904 KRIKLLNNSDERLQNSRAKDRKDV----WSSIQGQ-----WPKKTLKEL-FSDSDTEAAA 953
Query: 392 SEP------DIAIEKLWHTVAIATCVPNEVNFQDFVTADDDLIISQDTDIIQDMVAGENT 445
S P +A E L +C P+ + D I + T + D A +
Sbjct: 954 SPPHPAPEEGVAEESLQTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFPS 1013
Query: 446 SEAGSEDEGEVSLPEQP-KVTITE 468
S + S + PE P VT+TE
Sbjct: 1014 SGSNSVLNTPPTTPESPSSVTVTE 1037
>gi|66932972 GTP cyclohydrolase 1 isoform 3 [Homo sapiens]
Length = 213
Score = 29.3 bits (64), Expect = 9.1
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 289 HNMLPHLERIQVGYLPSNCTAVLQPL-NLGIIHTMKVLYQSHLLKQILLKLNSS 341
H+++P + ++ +GYLP+ L L + I++ ++ Q L KQI + + +
Sbjct: 143 HHLVPFVGKVHIGYLPNKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEA 196
>gi|66932970 GTP cyclohydrolase 1 isoform 2 [Homo sapiens]
Length = 233
Score = 29.3 bits (64), Expect = 9.1
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 289 HNMLPHLERIQVGYLPSNCTAVLQPL-NLGIIHTMKVLYQSHLLKQILLKLNSS 341
H+++P + ++ +GYLP+ L L + I++ ++ Q L KQI + + +
Sbjct: 143 HHLVPFVGKVHIGYLPNKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEA 196
>gi|66932968 GTP cyclohydrolase 1 isoform 1 [Homo sapiens]
Length = 250
Score = 29.3 bits (64), Expect = 9.1
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 289 HNMLPHLERIQVGYLPSNCTAVLQPL-NLGIIHTMKVLYQSHLLKQILLKLNSS 341
H+++P + ++ +GYLP+ L L + I++ ++ Q L KQI + + +
Sbjct: 143 HHLVPFVGKVHIGYLPNKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEA 196
>gi|4503949 GTP cyclohydrolase 1 isoform 1 [Homo sapiens]
Length = 250
Score = 29.3 bits (64), Expect = 9.1
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 289 HNMLPHLERIQVGYLPSNCTAVLQPL-NLGIIHTMKVLYQSHLLKQILLKLNSS 341
H+++P + ++ +GYLP+ L L + I++ ++ Q L KQI + + +
Sbjct: 143 HHLVPFVGKVHIGYLPNKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEA 196
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,401,849
Number of Sequences: 37866
Number of extensions: 786870
Number of successful extensions: 1969
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1891
Number of HSP's gapped (non-prelim): 45
length of query: 521
length of database: 18,247,518
effective HSP length: 107
effective length of query: 414
effective length of database: 14,195,856
effective search space: 5877084384
effective search space used: 5877084384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.