TIGD5 4015

Name: TIGD5	Sequence: fasta or formatted (593aa)		NCBI GI: 144922631
Description: tigger transposable element derived 5		Referenced in: DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.6 69 2 C cysteine 1.7 10 1 D aspartate 4.4 26 3 E glutamate 7.4 44 3 F phenylalanine 2.9 17 2 G glycine 10.3 61 3 H histidine 2.0 12 2 I isoleucine 2.0 12 1 K lysine 3.7 22 2 L leucine 11.1 66 2 M methionine 1.3 8 1 N asparagine 0.7 4 1 P proline 11.0 65 4 Q glutamine 3.9 23 2 R arginine 7.8 46 2 S serine 6.1 36 2 T threonine 2.2 13 1 V valine 5.1 30 2 W tryptophan 2.4 14 1 Y tyrosine 2.5 15 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tigger transposable element derived 5 JRK 0.115 jerky isoform a TIGD2 0.112 tigger transposable element derived 2 JRK 0.111 jerky isoform b JRKL 0.111 jerky homolog-like TIGD7 0.095 tigger transposable element derived 7 TIGD6 0.087 hypothetical protein LOC81789 TIGD1 0.081 hypothetical protein LOC200765 CENPB 0.074 centromere protein B TIGD4 0.065 tigger transposable element derived 4 TIGD3 0.042 tigger transposable element derived 3 LOC100293487 0.027 PREDICTED: similar to cag LOC100291289 0.027 PREDICTED: hypothetical protein XP_002347296 LOC100287896 0.027 PREDICTED: hypothetical protein XP_002343159 POGK 0.017 pogo transposable element with KRAB domain TAF4 0.014 TBP-associated factor 4 VASP 0.014 vasodilator-stimulated phosphoprotein LMTK3 0.014 lemur tyrosine kinase 3 COL5A2 0.013 alpha 2 type V collagen preproprotein PELP1 0.013 proline, glutamic acid and leucine rich protein 1 [... DGKK 0.013 diacylglycerol kinase kappa ENAH 0.012 enabled homolog isoform a ENAH 0.012 enabled homolog isoform b WAS 0.012 Wiskott-Aldrich syndrome protein FMN1 0.012 formin 1 C6orf132 0.012 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.012 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.012 PREDICTED: hypothetical protein LOC647024 FMN2 0.012 formin 2 SF3B4 0.012 splicing factor 3b, subunit 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.