Guide to the Human Genome
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Name: SPAG5 Sequence: fasta or formatted (1193aa) NCBI GI: 73623035
Description:

sperm associated antigen 5

Referenced in:

Coiled-Coil Proteins
Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         75           2
 C cysteine            2.0         24           3
 D aspartate           4.3         51           2
 E glutamate          11.7        139           3
 F phenylalanine       1.7         20           1
 G glycine             2.8         34           1
 H histidine           2.3         28           1
 I isoleucine          2.8         34           1
 K lysine              5.5         66           2
 L leucine            14.2        169           3
 M methionine          2.4         29           1
 N asparagine          2.8         34           2
 P proline             4.3         51           2
 Q glutamine           8.5        102           4
 R arginine            4.9         58           2
 S serine              9.8        117           2
 T threonine           6.9         82           2
 V valine              5.2         62           2
 W tryptophan          1.1         13           1
 Y tyrosine            0.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sperm associated antigen 5 
CEP250                0.033   centrosomal protein 2 
GOLGA3                0.031   Golgi autoantigen, golgin subfamily a, 3 
CEP110                0.029   centrosomal protein 110kDa 
NUMA1                 0.027   nuclear mitotic apparatus protein 1 
MYH7                  0.027   myosin, heavy chain 7, cardiac muscle, beta 
MYH9                  0.027   myosin, heavy polypeptide 9, non-muscle 
TPR                   0.027   nuclear pore complex-associated protein TPR 
FILIP1L               0.027   filamin A interacting protein 1-like isoform 3 [Hom...
FILIP1L               0.027   filamin A interacting protein 1-like isoform 1 [Hom...
CCDC88A               0.026   coiled-coil domain containing 88A isoform 2 
CCDC88A               0.025   coiled-coil domain containing 88A isoform 1 
PPL                   0.025   periplakin 
PMFBP1                0.025   polyamine modulated factor 1 binding protein 1 isof...
EEA1                  0.025   early endosome antigen 1, 162kD 
CENPE                 0.025   centromere protein E 
GOLGA4                0.025   golgi autoantigen, golgin subfamily a, 4 
LOC283685             0.025   PREDICTED: golgi autoantigen, golgin subfamily a-li...
GOLGB1                0.024   golgi autoantigen, golgin subfamily b, macrogolgin ...
KTN1                  0.024   kinectin 1 isoform b 
MYH11                 0.024   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.024   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.024   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.024   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
CGNL1                 0.024   cingulin-like 1 
FILIP1                0.024   filamin A interacting protein 1 
PMFBP1                0.024   polyamine modulated factor 1 binding protein 1 isof...
CIT                   0.024   citron 
PCNT                  0.024   pericentrin 
MYO18A                0.024   myosin 18A isoform b 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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