| Name: MGC16385 | Sequence: fasta or formatted (187aa) | NCBI GI: 49619234 | |
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Description: hypothetical protein LOC92806
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Referenced in: DNA Transposon and Retrovirus-related Sequences
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.2 19 2 C cysteine 1.1 2 1 D aspartate 4.3 8 2 E glutamate 10.2 19 2 F phenylalanine 2.7 5 1 G glycine 3.2 6 1 H histidine 2.7 5 1 I isoleucine 5.3 10 2 K lysine 7.0 13 1 L leucine 10.2 19 2 M methionine 3.2 6 1 N asparagine 1.6 3 1 P proline 4.3 8 1 Q glutamine 5.3 10 1 R arginine 7.0 13 2 S serine 9.6 18 2 T threonine 6.4 12 1 V valine 3.7 7 1 W tryptophan 1.1 2 1 Y tyrosine 1.1 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 hypothetical protein LOC92806 TIGD1 0.235 hypothetical protein LOC200765 JRKL 0.111 jerky homolog-like TIGD2 0.109 tigger transposable element derived 2 TIGD4 0.085 tigger transposable element derived 4 LOC100293487 0.082 PREDICTED: similar to cag LOC100291289 0.082 PREDICTED: hypothetical protein XP_002347296 LOC100287896 0.082 PREDICTED: hypothetical protein XP_002343159 TIGD6 0.079 hypothetical protein LOC81789 JRK 0.062 jerky isoform a JRK 0.062 jerky isoform b TIGD7 0.059 tigger transposable element derived 7 CENPB 0.050 centromere protein B LOC100293326 0.032 PREDICTED: similar to hCG1802057 LOC100291015 0.032 PREDICTED: hypothetical protein XP_002347719 LOC100288326 0.032 PREDICTED: hypothetical protein XP_002344143 TIGD5 0.029 tigger transposable element derived 5 ANKRD24 0.021 ankyrin repeat domain 24 DDX12 0.018 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12 [Ho... GSX2 0.018 GS homeobox 2 DCHS2 0.018 dachsous 2 isoform 1 UTP14A 0.015 UTP14, U3 small nucleolar ribonucleoprotein, homolog... UTP14C 0.015 UTP14, U3 small nucleolar ribonucleoprotein, homolog... C17orf80 0.015 lung cancer-related protein 8 isoform c C17orf80 0.015 lung cancer-related protein 8 isoform b C17orf80 0.015 lung cancer-related protein 8 isoform a FOXP2 0.015 forkhead box P2 isoform I DDX11 0.015 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX11 0.015 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... DDX11 0.015 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
