TIGD6 3494

Name: TIGD6	Sequence: fasta or formatted (521aa)		NCBI GI: 13569924
Description: hypothetical protein LOC81789		Referenced in: DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 44 3 C cysteine 2.3 12 2 D aspartate 7.3 38 3 E glutamate 6.1 32 2 F phenylalanine 3.6 19 2 G glycine 5.2 27 2 H histidine 2.3 12 1 I isoleucine 7.3 38 2 K lysine 7.5 39 2 L leucine 9.0 47 3 M methionine 2.9 15 1 N asparagine 4.4 23 1 P proline 3.3 17 1 Q glutamine 4.8 25 1 R arginine 5.2 27 2 S serine 6.0 31 2 T threonine 5.0 26 1 V valine 6.1 32 2 W tryptophan 1.9 10 2 Y tyrosine 1.3 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC81789 TIGD4 0.256 tigger transposable element derived 4 CENPB 0.173 centromere protein B TIGD7 0.161 tigger transposable element derived 7 JRKL 0.149 jerky homolog-like TIGD2 0.136 tigger transposable element derived 2 TIGD1 0.132 hypothetical protein LOC200765 TIGD5 0.103 tigger transposable element derived 5 JRK 0.102 jerky isoform a JRK 0.102 jerky isoform b TIGD3 0.101 tigger transposable element derived 3 POGK 0.046 pogo transposable element with KRAB domain LOC100293487 0.040 PREDICTED: similar to cag LOC100291289 0.040 PREDICTED: hypothetical protein XP_002347296 LOC100287896 0.040 PREDICTED: hypothetical protein XP_002343159 MGC16385 0.026 hypothetical protein LOC92806 ZFY 0.007 zinc finger protein, Y-linked isoform 1 ZFY 0.007 zinc finger protein, Y-linked isoform 2 LOC100293326 0.006 PREDICTED: similar to hCG1802057 LOC100291015 0.006 PREDICTED: hypothetical protein XP_002347719 LOC100288326 0.006 PREDICTED: hypothetical protein XP_002344143 SPAG5 0.006 sperm associated antigen 5 CCDC66 0.005 coiled-coil domain containing 66 isoform 1 CCDC66 0.005 coiled-coil domain containing 66 isoform 2 ARID4B 0.005 AT rich interactive domain 4B isoform 2 ARID4B 0.005 AT rich interactive domain 4B isoform 1 GCH1 0.004 GTP cyclohydrolase 1 isoform 3 GCH1 0.004 GTP cyclohydrolase 1 isoform 2 GCH1 0.004 GTP cyclohydrolase 1 isoform 1 GCH1 0.004 GTP cyclohydrolase 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.